Guide to the Human Genome
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Name: ABCB9 Sequence: fasta or formatted (723aa) NCBI GI: 9955968
Description:

ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 2

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt prot [766aa] ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 1
alt prot [766aa] ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         66           3
 C cysteine            1.0          7           1
 D aspartate           3.5         25           1
 E glutamate           4.8         35           4
 F phenylalanine       5.1         37           2
 G glycine             7.2         52           2
 H histidine           2.2         16           1
 I isoleucine          5.3         38           2
 K lysine              3.6         26           1
 L leucine            11.6         84           3
 M methionine          2.4         17           2
 N asparagine          3.2         23           1
 P proline             3.6         26           3
 Q glutamine           4.4         32           2
 R arginine            5.4         39           2
 S serine              7.9         57           2
 T threonine           5.7         41           2
 V valine              9.4         68           3
 W tryptophan          1.4         10           2
 Y tyrosine            3.3         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family B (MDR/TAP), member ... 
ABCB9                 0.985   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.985   ATP-binding cassette, sub-family B (MDR/TAP), member...
TAP2                  0.300   transporter 2, ATP-binding cassette, sub-family B is...
TAP2                  0.277   transporter 2, ATP-binding cassette, sub-family B is...
TAP1                  0.275   transporter 1, ATP-binding cassette, sub-family B [Ho...
ABCB10                0.241   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB8                 0.221   ATP-binding cassette, sub-family B, member 8 
ABCB11                0.199   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB4                 0.196   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB1                 0.194   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.194   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.194   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB5                 0.172   ATP-binding cassette, sub-family B, member 5 
ABCB6                 0.139   ATP-binding cassette, sub-family B, member 6 
ABCB7                 0.118   ATP-binding cassette, sub-family B, member 7 
ABCC2                 0.091   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC5                 0.090   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC1                 0.086   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.086   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.086   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.086   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC10                0.085   ATP-binding cassette, sub-family C, member 10 
ABCC9                 0.082   ATP-binding cassette, sub-family C, member 9 isofor...
LOC100292715          0.079   PREDICTED: hypothetical protein 
ABCC6                 0.079   ATP-binding cassette, sub-family C, member 6 isofor...
ABCC9                 0.078   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.078   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC4                 0.078   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC3                 0.076   ATP-binding cassette, sub-family C, member 3 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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