Guide to the Human Genome
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Name: ABCB7 Sequence: fasta or formatted (753aa) NCBI GI: 42490749
Description:

ATP-binding cassette, sub-family B, member 7

Referenced in:

ATP-binding Cassette Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         74           6
 C cysteine            0.7          5           1
 D aspartate           4.1         31           1
 E glutamate           4.5         34           3
 F phenylalanine       4.0         30           2
 G glycine             8.0         60           3
 H histidine           2.7         20           2
 I isoleucine          5.8         44           2
 K lysine              5.6         42           2
 L leucine            10.6         80           2
 M methionine          2.5         19           1
 N asparagine          4.4         33           2
 P proline             3.1         23           2
 Q glutamine           4.0         30           2
 R arginine            5.3         40           2
 S serine              6.9         52           2
 T threonine           5.7         43           1
 V valine              8.0         60           2
 W tryptophan          1.3         10           1
 Y tyrosine            3.1         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family B, member 7 
ABCB6                 0.305   ATP-binding cassette, sub-family B, member 6 
ABCB10                0.137   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB9                 0.130   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.130   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB1                 0.125   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.125   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB4                 0.121   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.120   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB8                 0.119   ATP-binding cassette, sub-family B, member 8 
ABCB5                 0.114   ATP-binding cassette, sub-family B, member 5 
ABCB11                0.114   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB9                 0.112   ATP-binding cassette, sub-family B (MDR/TAP), member ...
TAP1                  0.110   transporter 1, ATP-binding cassette, sub-family B [Ho...
TAP2                  0.095   transporter 2, ATP-binding cassette, sub-family B is...
ABCC5                 0.095   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC4                 0.087   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC12                0.087   ATP-binding cassette protein C12 
ABCC2                 0.085   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC3                 0.085   ATP-binding cassette, sub-family C, member 3 isoform ...
TAP2                  0.082   transporter 2, ATP-binding cassette, sub-family B is...
ABCC11                0.081   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.081   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC1                 0.080   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.080   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.080   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.080   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC10                0.077   ATP-binding cassette, sub-family C, member 10 
LOC100292715          0.073   PREDICTED: hypothetical protein 
ABCC1                 0.073   ATP-binding cassette, sub-family C, member 1 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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