Guide to the Human Genome
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Name: ABCC9 Sequence: fasta or formatted (1513aa) NCBI GI: 110832839
Description:

ATP-binding cassette, sub-family C, member 9 isoform SUR2A-delta-14

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt prot [1549aa] ATP-binding cassette, sub-family C, member 9 isoform SUR2A
alt prot [1549aa] ATP-binding cassette, sub-family C, member 9 isoform SUR2B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        105           2
 C cysteine            1.7         25           1
 D aspartate           4.2         64           2
 E glutamate           5.4         81           7
 F phenylalanine       4.9         74           2
 G glycine             5.6         84           2
 H histidine           2.2         33           2
 I isoleucine          7.3        111           2
 K lysine              5.0         76           3
 L leucine            13.4        203           3
 M methionine          2.9         44           2
 N asparagine          4.9         74           2
 P proline             3.1         47           2
 Q glutamine           3.4         51           1
 R arginine            4.2         64           2
 S serine              7.1        108           2
 T threonine           6.7        102           3
 V valine              6.5         98           2
 W tryptophan          1.7         25           2
 Y tyrosine            2.9         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family C, member 9 isofor... 
ABCC9                 0.994   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.977   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC8                 0.685   ATP-binding cassette, sub-family C, member 8 
ABCC1                 0.250   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC3                 0.245   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC2                 0.236   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC1                 0.221   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.220   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC4                 0.215   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC10                0.204   ATP-binding cassette, sub-family C, member 10 
ABCC6                 0.197   ATP-binding cassette, sub-family C, member 6 isofor...
LOC100292715          0.197   PREDICTED: hypothetical protein 
ABCC5                 0.179   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC12                0.179   ATP-binding cassette protein C12 
ABCC11                0.178   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.178   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.161   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC1                 0.158   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.142   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC4                 0.114   ATP-binding cassette, sub-family C, member 4 isofor...
CFTR                  0.088   cystic fibrosis transmembrane conductance regulator ...
ABCB1                 0.067   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.064   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB4                 0.061   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB11                0.059   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB5                 0.056   ATP-binding cassette, sub-family B, member 5 
TAP2                  0.046   transporter 2, ATP-binding cassette, sub-family B is...
ABCB10                0.045   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCC3                 0.042   ATP-binding cassette, sub-family C, member 3 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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