Guide to the Human Genome
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Name: ABCC9 Sequence: fasta or formatted (1549aa) NCBI GI: 110832835
Description:

ATP-binding cassette, sub-family C, member 9 isoform SUR2A

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt prot [1549aa] ATP-binding cassette, sub-family C, member 9 isoform SUR2B
alt prot [1513aa] ATP-binding cassette, sub-family C, member 9 isoform SUR2A-delta-14
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        107           2
 C cysteine            1.6         25           1
 D aspartate           4.3         66           2
 E glutamate           5.4         84           7
 F phenylalanine       4.8         74           2
 G glycine             5.5         85           2
 H histidine           2.2         34           2
 I isoleucine          7.4        114           2
 K lysine              5.1         79           3
 L leucine            13.2        205           3
 M methionine          2.8         44           2
 N asparagine          4.8         75           2
 P proline             3.2         50           2
 Q glutamine           3.5         54           1
 R arginine            4.5         69           2
 S serine              7.1        110           2
 T threonine           6.8        105           3
 V valine              6.3         98           2
 W tryptophan          1.6         25           2
 Y tyrosine            3.0         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family C, member 9 isofor... 
ABCC9                 0.984   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.970   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC8                 0.677   ATP-binding cassette, sub-family C, member 8 
ABCC1                 0.241   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC3                 0.238   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC2                 0.227   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC1                 0.213   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.211   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC5                 0.209   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC4                 0.207   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC10                0.200   ATP-binding cassette, sub-family C, member 10 
ABCC6                 0.189   ATP-binding cassette, sub-family C, member 6 isofor...
LOC100292715          0.188   PREDICTED: hypothetical protein 
ABCC12                0.178   ATP-binding cassette protein C12 
ABCC11                0.173   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.173   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.156   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC1                 0.154   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.138   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC4                 0.108   ATP-binding cassette, sub-family C, member 4 isofor...
CFTR                  0.085   cystic fibrosis transmembrane conductance regulator ...
ABCB1                 0.065   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.062   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB4                 0.060   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB11                0.057   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB5                 0.054   ATP-binding cassette, sub-family B, member 5 
TAP2                  0.045   transporter 2, ATP-binding cassette, sub-family B is...
ABCB10                0.044   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCC3                 0.041   ATP-binding cassette, sub-family C, member 3 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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