Guide to the Human Genome
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Name: ABCC4 Sequence: fasta or formatted (1325aa) NCBI GI: 157502201
Description:

ATP-binding cassette, sub-family C, member 4 isoform 1

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt prot [859aa] ATP-binding cassette, sub-family C, member 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         93           3
 C cysteine            1.2         16           1
 D aspartate           4.3         57           2
 E glutamate           5.7         76           2
 F phenylalanine       5.0         66           2
 G glycine             5.5         73           3
 H histidine           2.1         28           2
 I isoleucine          7.0         93           2
 K lysine              5.7         75           2
 L leucine            12.6        167           3
 M methionine          2.2         29           2
 N asparagine          3.5         47           1
 P proline             3.5         47           3
 Q glutamine           4.3         57           2
 R arginine            4.9         65           2
 S serine              7.0         93           3
 T threonine           6.1         81           3
 V valine              7.5         99           2
 W tryptophan          1.8         24           2
 Y tyrosine            2.9         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family C, member 4 isofor... 
ABCC4                 0.634   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC1                 0.317   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC2                 0.310   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC3                 0.297   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC12                0.283   ATP-binding cassette protein C12 
ABCC1                 0.282   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.274   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.273   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC11                0.261   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.261   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC10                0.255   ATP-binding cassette, sub-family C, member 10 
LOC100292715          0.251   PREDICTED: hypothetical protein 
ABCC6                 0.250   ATP-binding cassette, sub-family C, member 6 isofor...
ABCC9                 0.247   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.245   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.243   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC5                 0.243   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC8                 0.238   ATP-binding cassette, sub-family C, member 8 
ABCC11                0.237   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC1                 0.181   ATP-binding cassette, sub-family C, member 1 isofor...
CFTR                  0.150   cystic fibrosis transmembrane conductance regulator ...
ABCB1                 0.081   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.071   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB4                 0.070   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCC3                 0.061   ATP-binding cassette, sub-family C, member 3 isofor...
ABCB7                 0.049   ATP-binding cassette, sub-family B, member 7 
ABCB10                0.049   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB11                0.047   ATP-binding cassette, sub-family B (MDR/TAP), member...
TAP2                  0.047   transporter 2, ATP-binding cassette, sub-family B is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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