Guide to the Human Genome
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Name: ABCB8 Sequence: fasta or formatted (718aa) NCBI GI: 156105685
Description:

ATP-binding cassette, sub-family B, member 8

Referenced in:

ATP-binding Cassette Proteins
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         66           2
 C cysteine            2.1         15           2
 D aspartate           2.6         19           1
 E glutamate           5.4         39           3
 F phenylalanine       4.3         31           2
 G glycine             9.2         66           3
 H histidine           2.4         17           1
 I isoleucine          2.9         21           1
 K lysine              2.6         19           2
 L leucine            13.8         99           3
 M methionine          2.5         18           1
 N asparagine          1.8         13           1
 P proline             4.7         34           3
 Q glutamine           4.6         33           2
 R arginine            7.4         53           2
 S serine              7.1         51           3
 T threonine           5.4         39           2
 V valine              9.1         65           2
 W tryptophan          1.1          8           1
 Y tyrosine            1.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family B, member 8 
ABCB10                0.284   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB9                 0.246   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.246   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB9                 0.221   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB1                 0.216   ATP-binding cassette, subfamily B, member 1 
ABCB11                0.213   ATP-binding cassette, sub-family B (MDR/TAP), member...
TAP2                  0.211   transporter 2, ATP-binding cassette, sub-family B is...
ABCB4                 0.210   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.210   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB4                 0.210   ATP-binding cassette, subfamily B, member 4 isoform A...
TAP1                  0.198   transporter 1, ATP-binding cassette, sub-family B [Ho...
ABCB5                 0.190   ATP-binding cassette, sub-family B, member 5 
TAP2                  0.188   transporter 2, ATP-binding cassette, sub-family B is...
ABCB6                 0.153   ATP-binding cassette, sub-family B, member 6 
ABCB7                 0.125   ATP-binding cassette, sub-family B, member 7 
ABCC10                0.100   ATP-binding cassette, sub-family C, member 10 
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC2                 0.093   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC9                 0.088   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC3                 0.086   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC9                 0.085   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.085   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC4                 0.082   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC8                 0.082   ATP-binding cassette, sub-family C, member 8 
ABCC5                 0.081   ATP-binding cassette, sub-family C, member 5 isoform...
LOC100292715          0.079   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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