Guide to the Human Genome
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Name: ABCB9 Sequence: fasta or formatted (766aa) NCBI GI: 45243524
Description:

ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 1

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt mRNA [766aa] ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 1
alt prot [723aa] ATP-binding cassette, sub-family B (MDR/TAP), member 9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         67           3
 C cysteine            1.0          8           1
 D aspartate           3.4         26           1
 E glutamate           4.8         37           4
 F phenylalanine       5.1         39           2
 G glycine             7.4         57           2
 H histidine           2.2         17           1
 I isoleucine          5.6         43           2
 K lysine              3.4         26           1
 L leucine            11.9         91           3
 M methionine          2.5         19           2
 N asparagine          3.1         24           1
 P proline             3.4         26           3
 Q glutamine           4.4         34           2
 R arginine            5.1         39           2
 S serine              7.8         60           2
 T threonine           5.6         43           2
 V valine              9.5         73           3
 W tryptophan          1.3         10           2
 Y tyrosine            3.5         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family B (MDR/TAP), member... 
ABCB9                 1.000   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.930   ATP-binding cassette, sub-family B (MDR/TAP), member ...
TAP2                  0.307   transporter 2, ATP-binding cassette, sub-family B is...
TAP1                  0.297   transporter 1, ATP-binding cassette, sub-family B [Ho...
TAP2                  0.286   transporter 2, ATP-binding cassette, sub-family B is...
ABCB10                0.256   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB8                 0.231   ATP-binding cassette, sub-family B, member 8 
ABCB11                0.198   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB1                 0.198   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.196   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.196   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB4                 0.196   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB5                 0.173   ATP-binding cassette, sub-family B, member 5 
ABCB6                 0.141   ATP-binding cassette, sub-family B, member 6 
ABCB7                 0.128   ATP-binding cassette, sub-family B, member 7 
ABCC2                 0.097   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC5                 0.093   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.093   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC9                 0.087   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC10                0.085   ATP-binding cassette, sub-family C, member 10 
ABCC9                 0.083   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.083   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC3                 0.082   ATP-binding cassette, sub-family C, member 3 isoform ...
LOC100292715          0.081   PREDICTED: hypothetical protein 
ABCC6                 0.080   ATP-binding cassette, sub-family C, member 6 isofor...
ABCC4                 0.078   ATP-binding cassette, sub-family C, member 4 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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