TAP1 37677

Name: TAP1	Sequence: fasta or formatted (808aa)		NCBI GI: 9665248
Description: transporter 1, ATP-binding cassette, sub-family B		Referenced in: ATP-binding Cassette Proteins HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 79 3 C cysteine 1.2 10 1 D aspartate 2.7 22 2 E glutamate 5.1 41 2 F phenylalanine 3.3 27 2 G glycine 9.3 75 2 H histidine 1.7 14 1 I isoleucine 3.1 25 1 K lysine 2.6 21 2 L leucine 15.2 123 4 M methionine 1.7 14 1 N asparagine 2.1 17 2 P proline 5.7 46 3 Q glutamine 5.3 43 2 R arginine 5.6 45 2 S serine 8.3 67 2 T threonine 5.4 44 2 V valine 7.4 60 2 W tryptophan 2.1 17 1 Y tyrosine 2.2 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transporter 1, ATP-binding cassette, sub-family B [Ho... ABCB9 0.279 ATP-binding cassette, sub-family B (MDR/TAP), member ... ABCB9 0.279 ATP-binding cassette, sub-family B (MDR/TAP), member... TAP2 0.250 transporter 2, ATP-binding cassette, sub-family B is... ABCB9 0.244 ATP-binding cassette, sub-family B (MDR/TAP), member ... TAP2 0.236 transporter 2, ATP-binding cassette, sub-family B is... ABCB10 0.199 ATP-binding cassette, sub-family B, member 10 [Homo... ABCB8 0.175 ATP-binding cassette, sub-family B, member 8 ABCB1 0.151 ATP-binding cassette, subfamily B, member 1 ABCB4 0.148 ATP-binding cassette, subfamily B, member 4 isoform B... ABCB4 0.148 ATP-binding cassette, subfamily B, member 4 isoform C... ABCB4 0.148 ATP-binding cassette, subfamily B, member 4 isoform A... ABCB11 0.146 ATP-binding cassette, sub-family B (MDR/TAP), member... ABCB5 0.137 ATP-binding cassette, sub-family B, member 5 ABCB6 0.104 ATP-binding cassette, sub-family B, member 6 ABCB7 0.102 ATP-binding cassette, sub-family B, member 7 LOC100292715 0.088 PREDICTED: hypothetical protein ABCC6 0.087 ATP-binding cassette, sub-family C, member 6 isofor... ABCC2 0.085 ATP-binding cassette, sub-family C (CFTR/MRP), member... ABCC10 0.082 ATP-binding cassette, sub-family C, member 10 ABCC1 0.078 ATP-binding cassette, sub-family C, member 1 isofor... ABCC1 0.078 ATP-binding cassette, sub-family C, member 1 isofor... ABCC1 0.078 ATP-binding cassette, sub-family C, member 1 isofor... ABCC1 0.078 ATP-binding cassette, sub-family C, member 1 isofor... ABCC5 0.071 ATP-binding cassette, sub-family C, member 5 isoform... ABCC3 0.071 ATP-binding cassette, sub-family C, member 3 isoform ... ABCC4 0.069 ATP-binding cassette, sub-family C, member 4 isofor... ABCC9 0.061 ATP-binding cassette, sub-family C, member 9 isofor... ABCC9 0.058 ATP-binding cassette, sub-family C, member 9 isofor... ABCC9 0.058 ATP-binding cassette, sub-family C, member 9 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.