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Search of human proteins with 98986321
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|98986321 gliomedin [Homo sapiens]
(551 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|98986321 gliomedin [Homo sapiens] 1137 0.0
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 141 2e-33
gi|17157993 olfactomedin 2 [Homo sapiens] 135 1e-31
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 129 9e-30
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 126 6e-29
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 124 3e-28
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 124 3e-28
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 124 3e-28
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 124 3e-28
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 124 3e-28
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 124 3e-28
gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens] 124 3e-28
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 124 3e-28
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] 124 3e-28
gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] 124 3e-28
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 123 4e-28
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 122 7e-28
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 122 7e-28
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 122 7e-28
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 122 7e-28
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 122 7e-28
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens] 122 7e-28
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens] 122 7e-28
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 122 7e-28
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 122 7e-28
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens] 122 7e-28
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 122 7e-28
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens] 122 7e-28
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens] 122 7e-28
gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens] 122 7e-28
>gi|98986321 gliomedin [Homo sapiens]
Length = 551
Score = 1137 bits (2940), Expect = 0.0
Identities = 551/551 (100%), Positives = 551/551 (100%)
Query: 1 MARGAEGGRGDAGWGLRGALAAVALLSALNAAGTVFALCQWRGLSSALRALEAQRGREQR 60
MARGAEGGRGDAGWGLRGALAAVALLSALNAAGTVFALCQWRGLSSALRALEAQRGREQR
Sbjct: 1 MARGAEGGRGDAGWGLRGALAAVALLSALNAAGTVFALCQWRGLSSALRALEAQRGREQR 60
Query: 61 EDSALRSFLAELSRAPRGASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMV 120
EDSALRSFLAELSRAPRGASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMV
Sbjct: 61 EDSALRSFLAELSRAPRGASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMV 120
Query: 121 PIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKM 180
PIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKM
Sbjct: 121 PIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKM 180
Query: 181 GIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
GIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP
Sbjct: 181 GIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
Query: 241 PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASEHHSPQA 300
PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASEHHSPQA
Sbjct: 241 PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASEHHSPQA 300
Query: 301 ESMITSIGNPVQVLKVTETFGTWIRESANKSDDRIWVTEHFSGIMVKEFKDQPSLLNGSY 360
ESMITSIGNPVQVLKVTETFGTWIRESANKSDDRIWVTEHFSGIMVKEFKDQPSLLNGSY
Sbjct: 301 ESMITSIGNPVQVLKVTETFGTWIRESANKSDDRIWVTEHFSGIMVKEFKDQPSLLNGSY 360
Query: 361 TFIHLPYYFHGCGHVVYNNSLYYHKGGSNTLVRFEFGQETSQTLKLENALYFDRKYLFAN 420
TFIHLPYYFHGCGHVVYNNSLYYHKGGSNTLVRFEFGQETSQTLKLENALYFDRKYLFAN
Sbjct: 361 TFIHLPYYFHGCGHVVYNNSLYYHKGGSNTLVRFEFGQETSQTLKLENALYFDRKYLFAN 420
Query: 421 SKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIARG 480
SKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIARG
Sbjct: 421 SKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIARG 480
Query: 481 ILYVTDTKDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHLMLY 540
ILYVTDTKDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHLMLY
Sbjct: 481 ILYVTDTKDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHLMLY 540
Query: 541 PVQFLSTTLNQ 551
PVQFLSTTLNQ
Sbjct: 541 PVQFLSTTLNQ 551
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 141 bits (355), Expect = 2e-33
Identities = 82/245 (33%), Positives = 138/245 (56%), Gaps = 6/245 (2%)
Query: 304 ITSIGNPVQVLKVTETFGTWIRES-ANKSDDRIWVTEHF-SGIMVKEFKDQPSLLN-GSY 360
+T I +PV V FG+W+ + A + D+R+W + + + V+E+K +N ++
Sbjct: 212 LTGISDPVTVKTSGSRFGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNF 271
Query: 361 TFIHLPYYFHGCGHVVYNNSLYYHKGGSNTLVRFEFGQETS-QTLKLENALYFDRKYLFA 419
T LP+ + G G VVYN S+Y++K S+ ++RF+ ET +T L+ A Y + +
Sbjct: 272 TSHRLPHPWSGTGQVVYNGSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAW 331
Query: 420 NSKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIAR 479
+ +L VDE GLW +YA++ + +I+V++LD + +Q NT+YPK AG AFI
Sbjct: 332 GGHSDIDLMVDESGLWAVYATNQNAGNIVVSRLDPVSLQTLQTWNTSYPKRSAGEAFIIC 391
Query: 480 GILYVTD--TKDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHL 537
G LYVT+ + +V +A+ + + S ++ML YN +D+ LY+W +GH
Sbjct: 392 GTLYVTNGYSGGTKVHYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQ 451
Query: 538 MLYPV 542
+LY V
Sbjct: 452 ILYNV 456
>gi|17157993 olfactomedin 2 [Homo sapiens]
Length = 454
Score = 135 bits (340), Expect = 1e-31
Identities = 77/245 (31%), Positives = 132/245 (53%), Gaps = 6/245 (2%)
Query: 304 ITSIGNPVQVLKVTETFGTWIRES-ANKSDDRIWVTE-HFSGIMVKEFKDQPSLLNGSYT 361
+T + NP+ V + FG+W+ ++ A +D R+W + ++ G V EF+ + G
Sbjct: 198 LTGVSNPITVRAMGSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDFIKGQNF 257
Query: 362 FIHL-PYYFHGCGHVVYNNSLYYHKGGSNTLVRFEFGQETSQTLKLENALYFDRKYLFA- 419
HL P + G GHVVYN SL+Y+K SN +V++ F + + ++ + ++
Sbjct: 258 IQHLLPQPWAGTGHVVYNGSLFYNKYQSNVVVKYHFRSRSVLVQRSLPGAGYNNTFPYSW 317
Query: 420 NSKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIAR 479
+ + VDE GLW +Y ++ + +I+V++LD T V++ +T YPK AG AF+
Sbjct: 318 GGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVMRSWDTGYPKRSAGEAFMIC 377
Query: 480 GILYVTDT--KDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHL 537
G+LYVT++ +V FA+ + S ++ML YN R++ LY+W +GH
Sbjct: 378 GVLYVTNSHLAGAKVYFAYFTNTSSYEYTDVPFHNQYSHISMLDYNPRERALYTWNNGHQ 437
Query: 538 MLYPV 542
+LY V
Sbjct: 438 VLYNV 442
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 129 bits (323), Expect = 9e-30
Identities = 75/176 (42%), Positives = 88/176 (50%), Gaps = 46/176 (26%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQP---------------GPQGPKGEKGANGKRGKMGIP 183
GP GPPGPPG GLPGH G G+ GPQGP GE G G+RG G P
Sbjct: 961 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP 1020
Query: 184 GAAGN------PGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGP 237
G G G+ G KGD G GL G +GPPG +G GD+G + V G KG++GP
Sbjct: 1021 GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRG-LPGPVGALGLKGNEGP 1079
Query: 238 PGPPGP---------------------PGPPGPPGPPGSRRA---KGPRQPSMFNG 269
PGPPGP PGP GPPGP G + A KGP+ P+ +G
Sbjct: 1080 PGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG 1135
Score = 128 bits (322), Expect = 1e-29
Identities = 74/155 (47%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 139 GPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG-- 190
GP GP PGPPG G G G G PGP GP+G GA G G G PG GNPG
Sbjct: 1222 GPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV 1281
Query: 191 -ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP------ 243
E+GE G+ GE GL G GPPG KGE+G+KG+ S AG G +GPPG GP
Sbjct: 1282 GEKGEPGEAGEPGLPGEGGPPGPKGERGEKGE-SGPSGAAGPPGPKGPPGDDGPKGSPGP 1340
Query: 244 ---PGPPGPPGPPGSRRAKGPRQPSMFNGQCPGET 275
PG PGPPG PG GP +G+ PG+T
Sbjct: 1341 VGFPGDPGPPGEPGPAGQDGPPGDKGDDGE-PGQT 1374
Score = 128 bits (321), Expect = 2e-29
Identities = 70/138 (50%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGP---QGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
G +GP GP GA G PG +GL G PGP QG G G +G G MG PG G G+ G K
Sbjct: 1420 GKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQ---GPPGPPGPPGPPGPPGP 252
G+ G GL G GPPG++GEKGD+G + +G KG+Q GP GP GPPGPPG PGP
Sbjct: 1480 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGP 1538
Query: 253 PGSRRAKGPRQPSMFNGQ 270
PG + AKG P+ G+
Sbjct: 1539 PGPKGAKGSSGPTGPKGE 1556
Score = 120 bits (300), Expect = 4e-27
Identities = 65/147 (44%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 139 GPSGPPG------------PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAA 186
GP GPPG PG G PG G G PGP+G +GEKG +G G G PG
Sbjct: 1267 GPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPK 1326
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPP---GPPGP 243
G PG+ G KG G +G G+ GPPG+ G G G G KGD G P G PGP
Sbjct: 1327 GPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-------PGDKGDDGEPGQTGSPGP 1379
Query: 244 PGPPGPPGPPGSRRAKGPRQPSMFNGQ 270
G PGP GPPG R GP P G+
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQGE 1406
Score = 119 bits (299), Expect = 6e-27
Identities = 68/152 (44%), Positives = 75/152 (49%), Gaps = 31/152 (20%)
Query: 137 LTGPSGPPGPPGAGGLPGHNG---------LDGQPGPQGPKG---------EKGANGKRG 178
L G GPPGPPG G PG G + G+PGPQGP G EKG G G
Sbjct: 1073 LKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAG 1132
Query: 179 KMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPP 238
+ G+ G G PG G G GE G +G G PGQKG KGD KG+QGPP
Sbjct: 1133 RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD-------------KGEQGPP 1179
Query: 239 GPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ 270
GP GP GP G PGP G+ GPR GQ
Sbjct: 1180 GPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQ 1211
Score = 119 bits (298), Expect = 7e-27
Identities = 77/181 (42%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 137 LTGPSGPPGPPGAGGL---PGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
LTG GP GPPG+GGL PG G G G QGP G G G+RG+ G GA G PG+ G
Sbjct: 566 LTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTG 625
Query: 194 EKGDHGELGL---------------QGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGDQG 236
KGD G GL G GPPG GE+GD G+V L G +G G
Sbjct: 626 PKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLG 685
Query: 237 PPGPPGPPGPP------GPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
P GPPGPPGPP G PGP G+ +G P G PG +P +G E
Sbjct: 686 PKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGN-PGAQ-GLPGPQGAIGPPGE 743
Query: 291 K 291
K
Sbjct: 744 K 744
Score = 116 bits (290), Expect = 6e-26
Identities = 69/159 (43%), Positives = 83/159 (52%), Gaps = 18/159 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG---EKGANGKRG------KMGIPGAAGNP 189
GP GP GP G G PG +G DG+PGP+G +G +KG G RG +G+ G G P
Sbjct: 1177 GPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPP 1236
Query: 190 GERGEKGDHGELGLQGNEGP------PGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
GE+GE GD G++G G GP PG G +G G + N + G KG+ G G PG
Sbjct: 1237 GEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV-GEKGEPGEAGEPGL 1295
Query: 244 PGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PG GPPGP G R KG PS G P P DD
Sbjct: 1296 PGEGGPPGPKGERGEKGESGPSGAAG--PPGPKGPPGDD 1332
Score = 115 bits (288), Expect = 1e-25
Identities = 66/156 (42%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE--- 194
TGP G GP G G PG G G GP GP GE+G NG +G G PG G PG G+
Sbjct: 915 TGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGL 974
Query: 195 ---KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G GE G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 975 PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE----TGPMGERGHPGPPGPPGEQGLPG 1030
Query: 252 PPGSRRAKGPRQPSMFNGQ-CPGETCAIPNDDTLVG 286
G KG P+ G+ P P D L G
Sbjct: 1031 LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPG 1066
Score = 115 bits (288), Expect = 1e-25
Identities = 70/155 (45%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 139 GPSGPPGP------PGAGGLPGHNGLDGQPGPQ------------GPKGEKGANGKRGKM 180
GP G PGP PG G PG G DG PG + GP GE G +G GK
Sbjct: 1333 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1392
Query: 181 GIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL--LAGAKGDQGPP 238
G PG AG G +GEKG GE GL+G G G G +G G D L + G G+QG P
Sbjct: 1393 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP 1452
Query: 239 GPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPG 273
G PGP GPPGP GPPG KG P G PG
Sbjct: 1453 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGH-PG 1486
Score = 114 bits (286), Expect = 2e-25
Identities = 61/126 (48%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG PG G+DGQPGP+G G +G G G+ G PGA G PG +G G
Sbjct: 683 LLGPKGPPGPPGP---PGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIG 739
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
GE G G G PG G G G + G G++G GPPGP GP G PGP G +
Sbjct: 740 PPGEKGPLGKPGLPGMPGADGPPGHPGKE----GPPGEKGGQGPPGPQGPIGYPGPRGVK 795
Query: 257 RAKGPR 262
A G R
Sbjct: 796 GADGIR 801
Score = 114 bits (284), Expect = 3e-25
Identities = 65/149 (43%), Positives = 74/149 (49%), Gaps = 23/149 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G G GP GEKG GK G G+PGA G PG G++G
Sbjct: 712 GPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPP 771
Query: 199 GELGLQGNEGPPGQ------------------KGEKGDKGD-----VSNDVLLAGAKGDQ 235
GE G QG GP G KG KG+KG+ D+ + G +G+
Sbjct: 772 GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEI 831
Query: 236 GPPGPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGP G GP GP G G GP P
Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGP 860
Score = 114 bits (284), Expect = 3e-25
Identities = 60/139 (43%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G GPPGP G G G +G G GP GPKG G +G +G G G G+PG GE G
Sbjct: 1295 LPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPG 1354
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G+ +GPPG KG+ G+ G + G G+ GP GPPG GPPGP GP G +
Sbjct: 1355 PAGQ------DGPPGDKGDDGEPGQTGS----PGPTGEPGPSGPPGKRGPPGPAGPEGRQ 1404
Query: 257 RAKGPRQPSMFNGQCPGET 275
KG + + G PG+T
Sbjct: 1405 GEKGAKGEAGLEGP-PGKT 1422
Score = 112 bits (281), Expect = 7e-25
Identities = 63/139 (45%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE-- 194
+ G GPPG PG G PG G G PGPQGP G G G +G GI G G GE+GE
Sbjct: 755 MPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDG 814
Query: 195 ----KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPP 250
KGD G G +G GPPG +GE G +G G GD GP GPPG G G P
Sbjct: 815 FPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR----GGPNGDPGPLGPPGEKGKLGVP 870
Query: 251 GPPGSRRAKGPRQPSMFNG 269
G PG +GP+ F G
Sbjct: 871 GLPGYPGRQGPKGSIGFPG 889
Score = 112 bits (281), Expect = 7e-25
Identities = 62/125 (49%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE------KGANGKRGKMGIPGAAGNPGER 192
G GP GPPG G G GL G PG QGPKG GANG++G G PG G G+R
Sbjct: 853 GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 912
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP---PGPPGP 249
G G GE G +G G PG KG G G AG G++GP GP GP PGP GP
Sbjct: 913 GPTGPRGERGPRGITGKPGPKGNSGGDGP-------AGPPGERGPNGPQGPTGFPGPKGP 965
Query: 250 PGPPG 254
PGPPG
Sbjct: 966 PGPPG 970
Score = 108 bits (271), Expect = 1e-23
Identities = 60/129 (46%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQG---PKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP GPPG G G PG G G PGP G P G+ G G +G G PG G+PG GE
Sbjct: 1324 GPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEP 1383
Query: 196 GDHGELGLQGNEGPPG---QKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
G G G +G GP G ++GEKG KG+ AG +G G GP GP G PG PGP
Sbjct: 1384 GPSGPPGKRGPPGPAGPEGRQGEKGAKGE-------AGLEGPPGKTGPIGPQGAPGKPGP 1436
Query: 253 PGSRRAKGP 261
G R GP
Sbjct: 1437 DGLRGIPGP 1445
Score = 108 bits (269), Expect = 2e-23
Identities = 64/162 (39%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD- 197
GP GP G G G G G +G PGP GP GEKG K+G+PG G PG +G KG
Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKG------KLGVPGLPGYPGRQGPKGSI 885
Query: 198 --------HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
+GE G +G G PG +G++G G G +G G PGP G G GP
Sbjct: 886 GFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGE----RGPRGITGKPGPKGNSGGDGP 941
Query: 250 PGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEK 291
GPPG R GP+ P+ F G P P D L G ++
Sbjct: 942 AGPPGERGPNGPQGPTGFPG--PKGPPGPPGKDGLPGHPGQR 981
Score = 107 bits (268), Expect = 2e-23
Identities = 61/146 (41%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
Query: 139 GPSGPPGPPGAGGLPGHNG------LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
GPSGPPGPPG G G +G L G+PGP+G G KG G G G+ G G PG +
Sbjct: 649 GPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPK 708
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPG---------PPGP 243
G G GE G G +G PG +G G +G + G KG G PG PPG
Sbjct: 709 GNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPP----GEKGPLGKPGLPGMPGADGPPGH 764
Query: 244 PGPPGPPGPPGSRRAKGPRQPSMFNG 269
PG GPPG G + GP+ P + G
Sbjct: 765 PGKEGPPGEKGGQGPPGPQGPIGYPG 790
Score = 107 bits (268), Expect = 2e-23
Identities = 63/139 (45%), Positives = 69/139 (49%), Gaps = 28/139 (20%)
Query: 137 LTGPSGPPGPPGAGG------LPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
L GP+GP GPPG G PG G G G QGP G G G G+ G GA G PG
Sbjct: 1142 LPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPG 1201
Query: 191 ERGE------KGDHGE---------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQ 235
RG+ KGD G +GLQG GPPG+KGE GD G + G G
Sbjct: 1202 PRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQM-------GPPGPP 1254
Query: 236 GPPGPPGPPGPPGPPGPPG 254
GP GP G PG GP GPPG
Sbjct: 1255 GPRGPSGAPGADGPQGPPG 1273
Score = 106 bits (265), Expect = 5e-23
Identities = 60/130 (46%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG PG GL G G G PGP G G G G +G +G G G PG++G G
Sbjct: 670 GPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQ 729
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP------GPPGP 252
G G QG GPPG+KG G G L G G GPPG PG GPP GPPGP
Sbjct: 730 GLPGPQGAIGPPGEKGPLGKPG-------LPGMPGADGPPGHPGKEGPPGEKGGQGPPGP 782
Query: 253 PGSRRAKGPR 262
G GPR
Sbjct: 783 QGPIGYPGPR 792
Score = 105 bits (261), Expect = 1e-22
Identities = 61/136 (44%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLD---GQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER- 192
L GP G PGP G G PG +G G+PG +G KG+KG G G G G G PG
Sbjct: 1136 LQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSG 1195
Query: 193 --GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGDQGPPGPPGPPGPPG 248
GE G G+ GL G +G G +G G G V L G KG+ G G GPPGPPG
Sbjct: 1196 ADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPG 1255
Query: 249 PPGPPGSRRAKGPRQP 264
P GP G+ A GP+ P
Sbjct: 1256 PRGPSGAPGADGPQGP 1271
Score = 103 bits (258), Expect = 3e-22
Identities = 60/134 (44%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 137 LTGPSGPPGPP------GAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
L GP G GPP G GLPG G DG PG G +G G G +G G G G PG
Sbjct: 731 LPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPG 790
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPP 250
RG KG G GL+G +G G+ G G KGD+ G KGD+G GPPGP G GP
Sbjct: 791 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDM-------GIKGDRGEIGPPGPRGEDGPE 843
Query: 251 GPPGSRRAKGPRQP 264
GP G G P
Sbjct: 844 GPKGRGGPNGDPGP 857
Score = 91.3 bits (225), Expect = 2e-18
Identities = 66/210 (31%), Positives = 77/210 (36%), Gaps = 82/210 (39%)
Query: 134 GICLTGPSGPP------------------------GPPGAGGLPGHNGLDGQPGP----- 164
G+ + GP GP GPPG GLPG +GL G PG
Sbjct: 464 GMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLP 523
Query: 165 ----------------------------------QGPKGEKGANGKRGKMGIPGAAGNPG 190
+GP G G G+ G +G PG+ G G
Sbjct: 524 FRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKG 583
Query: 191 ERGEKGDHGELGLQGNEGP------------------PGQKGEKGDKGDVSNDVLLAGAK 232
E G+ G G G+QG GP PGQ G KGD+G L G K
Sbjct: 584 EPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRG-FDGLAGLPGEK 642
Query: 233 GDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G +G PGP GPPGPPG G G GPR
Sbjct: 643 GHRGDPGPSGPPGPPGDDGERGDDGEVGPR 672
Score = 88.2 bits (217), Expect = 2e-17
Identities = 57/140 (40%), Positives = 60/140 (42%), Gaps = 55/140 (39%)
Query: 139 GPSGPPGPPGAGGLPG------------HNGL---------------DGQPGPQG---PK 168
GP GPPGP G GLPG H GL G PGPQG PK
Sbjct: 1456 GPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPK 1515
Query: 169 GEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLL 228
GE+G G G +G PG G P GPPG KG KG G
Sbjct: 1516 GEQGITGPSGPIGPPGPPGLP------------------GPPGPKGAKGSSGP------- 1550
Query: 229 AGAKGDQGPPGPPGPPGPPG 248
G KG+ G PGPPGPPGPPG
Sbjct: 1551 TGPKGEAGHPGPPGPPGPPG 1570
Score = 81.6 bits (200), Expect = 2e-15
Identities = 53/140 (37%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 148 GAGGLPGHNGLDGQP----------GPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD 197
G GG G G G+P GP GP+G G G G MG G G+PGERG G
Sbjct: 444 GIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGR 503
Query: 198 HGELGLQGNEGPPGQK----------GEKGDKGDV-------SNDVLLAGAKGDQGPPGP 240
G G G GPPG G+ G KG + + +L +GP GP
Sbjct: 504 PGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGP 563
Query: 241 PGPPGPPGPPGPPGSRRAKG 260
G G PGP GPPGS KG
Sbjct: 564 MGLTGRPGPVGPPGSGGLKG 583
Score = 64.7 bits (156), Expect = 2e-10
Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
+TGPSGP GPPG GLP G PGP+G KG G G +G+ G PG G PG GE
Sbjct: 1520 ITGPSGPIGPPGPPGLP------GPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGE 1571
Score = 60.5 bits (145), Expect = 4e-09
Identities = 32/68 (47%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGP---QGPKGEKGANGKRGKMGIPGAAGNPGERG 193
L GP G GP G G+ G +G G PGP GP G KGA G G G G AG+PG G
Sbjct: 1505 LPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPG 1564
Query: 194 EKGDHGEL 201
G GE+
Sbjct: 1565 PPGPPGEV 1572
Score = 57.4 bits (137), Expect = 3e-08
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 204 QGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
+G GP G+KG+KG+ + +L+ G G +GP G PGPPG GP G G +GP
Sbjct: 443 EGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGP 500
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 126 bits (316), Expect = 6e-29
Identities = 63/124 (50%), Positives = 69/124 (55%), Gaps = 16/124 (12%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLD------GQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
L GP GPPGPPG G+PG G D G PG GP GE G G G+ G+ GA G PG
Sbjct: 617 LRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGEDGPAGEPGPPGPEGQPGVDGATGLPG 676
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPP 250
+GEKG G G G +G PG +G G G KG GPPG GPPGPPGPP
Sbjct: 677 MKGEKGARGPNGSVGEKGDPGNRGLPGP----------PGKKGQAGPPGVMGPPGPPGPP 726
Query: 251 GPPG 254
GPPG
Sbjct: 727 GPPG 730
Score = 107 bits (268), Expect = 2e-23
Identities = 63/132 (47%), Positives = 69/132 (52%), Gaps = 24/132 (18%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG----------- 190
GPPGP G GLPG PGP+GPKG+ G G G G G G PG
Sbjct: 823 GPPGPDGLPGLPGF------PGPRGPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLER 876
Query: 191 ---ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL--LAGAKGDQGP--PGPPGP 243
++GE G HG G G +GPPG KGE G G L L G KGD G GPPG
Sbjct: 877 LMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGL 936
Query: 244 PGPPGPPGPPGS 255
PGPPGPPGPPG+
Sbjct: 937 PGPPGPPGPPGA 948
Score = 106 bits (264), Expect = 6e-23
Identities = 71/167 (42%), Positives = 86/167 (51%), Gaps = 28/167 (16%)
Query: 100 PAPHIRAESHDMLMM----MTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGH 155
P HI+ S+ ++ + M +S +P V + G L G GP GP G GLPG
Sbjct: 794 PPGHIKVLSNSLINITHGFMNFSDIPELVGPPGPDGLPG--LPGFPGPRGPKGDTGLPGF 851
Query: 156 NGLDGQPGPQGPKGEKGA-----------NGKRGKMGIPGAAGNPGERGEKGDHGELGLQ 204
GL G+ QG KGE GA GK+G+ G+ GA G G +G G GE GL
Sbjct: 852 PGLKGE---QGEKGEPGAILTEDIPLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLP 908
Query: 205 GNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G G PG G KG KGD V++ QGPPG PGPPGPPGPPG
Sbjct: 909 GRPGRPGLNGLKGTKGDPG--VIM------QGPPGLPGPPGPPGPPG 947
Score = 104 bits (260), Expect = 2e-22
Identities = 61/145 (42%), Positives = 71/145 (48%), Gaps = 29/145 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP+G PGPPG G PG +G G PG +G KG +G NG G+ G PG G PG G+KG
Sbjct: 652 GPAGEPGPPGPEGQPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKKGQA 711
Query: 199 GELGLQGNEGPPGQKGEKG-----------DKGDVSNDVL-------------LAGAKGD 234
G G+ G GPPG G G +G S +L L G KGD
Sbjct: 712 GPPGVMGPPGPPGPPGPPGPGCTMGLGFEDTEGSGSTQLLNEPKLSRPTAAIGLKGEKGD 771
Query: 235 QGPPGPPGPP-----GPPGPPGPPG 254
+GP G G GPPGP GPPG
Sbjct: 772 RGPKGERGMDGASIVGPPGPRGPPG 796
Score = 94.0 bits (232), Expect = 3e-19
Identities = 80/221 (36%), Positives = 88/221 (39%), Gaps = 77/221 (34%)
Query: 137 LTGPSGPPGPPGA----------------------------------GGLPGHNGLDGQP 162
L GP GPPGPPGA G+ G G G P
Sbjct: 936 LPGPPGPPGPPGAVINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLP 995
Query: 163 GPQGPKGEKGANGKRGK--------------MGIPGAAGNPGERGEKGD-------HGEL 201
G +G KG++GA G G G G G GE+GEKGD G
Sbjct: 996 GSKGEKGDQGAQGPPGPPLDLAYLRHFLNNLKGENGDKGFKGEKGEKGDINGSFLMSGPP 1055
Query: 202 GLQGNEGPPGQKGEK--GDKGDVSNDVLLAGAKGDQGPPG-----PPGPPGPPGPPGPPG 254
GL GN GP GQKGE G +G GA G GPPG PGPPGPPGPPGPP
Sbjct: 1056 GLPGNPGPAGQKGETVVGPQGP-------PGAPGLPGPPGFGRPGDPGPPGPPGPPGPPA 1108
Query: 255 SRRA----KGPRQPSMFNGQCPGE---TCAIPNDDTLVGKA 288
A GP P G PG A N D ++ KA
Sbjct: 1109 ILGAAVALPGPPGPPGQPG-LPGSRNLVTAFSNMDDMLQKA 1148
Score = 93.2 bits (230), Expect = 6e-19
Identities = 66/205 (32%), Positives = 79/205 (38%), Gaps = 79/205 (38%)
Query: 139 GPSGPPGPPGAGGLPGH------NGLDGQ--------------PGPQGPKGEKGA----- 173
GP GPPG G GLPG NGL G PGP GP G GA
Sbjct: 894 GPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIK 953
Query: 174 --------------------------------NGKRGKMGIPGAAGNPGERGEKGDHGEL 201
G++G G+PG+ G G++G +G G
Sbjct: 954 GAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPP 1013
Query: 202 -----------GLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPP-----------G 239
L+G G G KGEKG+KGD++ L++G G G P G
Sbjct: 1014 LDLAYLRHFLNNLKGENGDKGFKGEKGEKGDINGSFLMSGPPGLPGNPGPAGQKGETVVG 1073
Query: 240 PPGPPGPPGPPGPPGSRRAKGPRQP 264
P GPPG PG PGPPG R P P
Sbjct: 1074 PQGPPGAPGLPGPPGFGRPGDPGPP 1098
Score = 90.1 bits (222), Expect = 5e-18
Identities = 61/165 (36%), Positives = 68/165 (41%), Gaps = 49/165 (29%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGP--------------------KGEKGAN 174
I G G G G G G G G GP GP KG KG
Sbjct: 980 ITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPLDLAYLRHFLNNLKGENGDKGFKGEK 1039
Query: 175 GKRGKM-------GIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
G++G + G PG GNPG G+KG+ + G +GPPG G G G
Sbjct: 1040 GEKGDINGSFLMSGPPGLPGNPGPAGQKGE----TVVGPQGPPGAPGLPGPPG------- 1088
Query: 228 LAGAKGDQGPPGPPGPPGP----------PGPPGPPGSRRAKGPR 262
G GD GPPGPPGPPGP PGPPGPPG G R
Sbjct: 1089 -FGRPGDPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSR 1132
Score = 88.2 bits (217), Expect = 2e-17
Identities = 59/159 (37%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 128 LCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE----------------- 170
L T I L G G GP G G+ G + + G PGP+GP G
Sbjct: 756 LSRPTAAIGLKGEKGDRGPKGERGMDGAS-IVGPPGPRGPPGHIKVLSNSLINITHGFMN 814
Query: 171 ----KGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDV 226
G G G+PG G PG RG KGD G G G +G G+KGE G ++ D+
Sbjct: 815 FSDIPELVGPPGPDGLPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKGEPG--AILTEDI 872
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG-PRQP 264
L G +G PG G PGP GP GPPG + G P +P
Sbjct: 873 PLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRP 911
Score = 71.6 bits (174), Expect = 2e-12
Identities = 56/157 (35%), Positives = 67/157 (42%), Gaps = 31/157 (19%)
Query: 140 PSGPPGP-----PGAGGLPG---HNGLDGQPGPQGPKGEKGAN--GKRGKMGIPG-AAGN 188
P GPP P P P H G+ GQ GP+G KG+ G G G G AG
Sbjct: 531 PDGPPLPLPTVAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGA 590
Query: 189 PGERGEKGDHGELG------------LQGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGD 234
E G ++G L+G GPPG G G G DV + G+ G+
Sbjct: 591 EAEGSGLGWGSDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGE 650
Query: 235 QGPPGPPGPPGPPGPPGP------PGSRRAKGPRQPS 265
GP G PGPPGP G PG PG + KG R P+
Sbjct: 651 DGPAGEPGPPGPEGQPGVDGATGLPGMKGEKGARGPN 687
Score = 55.8 bits (133), Expect = 1e-07
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 133 KGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRG-KMGIPGAAGNPGE 191
KG + GP GPPG PG G PG G G PGP GP G G G + +PG G PG+
Sbjct: 1067 KGETVVGPQGPPGAPGLPGPPGF-GRPGDPGPPGPPGPPGPPAILGAAVALPGPPGPPGQ 1125
Query: 192 RGEKG 196
G G
Sbjct: 1126 PGLPG 1130
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 124 bits (310), Expect = 3e-28
Identities = 66/125 (52%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---NGKRGKMGIPGAAGNPGERGEK 195
G +GP GP G G PG GL G PGP G +G GA +G G MG PG G G+ G K
Sbjct: 1402 GKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSK 1461
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G+ G GL G GPPG++GEKGD+G + GAKGD G PGP GP GPPGPPG PG
Sbjct: 1462 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1520
Query: 256 RRAKG 260
+ KG
Sbjct: 1521 QGPKG 1525
Score = 122 bits (305), Expect = 1e-27
Identities = 68/144 (47%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP G GEKG G+ G G PG AG G +
Sbjct: 1228 GPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPK 1287
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP--------- 243
GE+G+ GE G G GPPG KG GD G N + G GD GPPG PGP
Sbjct: 1288 GERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV-GFPGDPGPPGEPGPAGQDGVGGD 1346
Query: 244 ------PGPPGPPGPPGSRRAKGP 261
PG PGPPGP G GP
Sbjct: 1347 KGEDGDPGQPGPPGPSGEAGPPGP 1370
Score = 119 bits (299), Expect = 6e-27
Identities = 68/137 (49%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDG---QPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP G PGP G G+ G G DG QPGP GP GE G G GK G PGAAG G +GEK
Sbjct: 1330 GPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK 1389
Query: 196 GDHGE------------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
G GE +G QG G PG +G +G G V L GA G GPPGP GP
Sbjct: 1390 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQG-LPGAAGQDGPPGPMGP 1448
Query: 244 PGPPGPPGPPGSRRAKG 260
PG PG G PGS+ KG
Sbjct: 1449 PGLPGLKGDPGSKGEKG 1465
Score = 118 bits (296), Expect = 1e-26
Identities = 71/175 (40%), Positives = 84/175 (48%), Gaps = 44/175 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQP---------------GPQGPKGEKGANGKRGKMGIP 183
GP GPPGPPG GLPGH G G+ GPQGP GE G G+RG G P
Sbjct: 943 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPP 1002
Query: 184 GAAGN------PGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQ 235
G G G+ G KGD G G+ G +GP G +G G++G L G +G Q
Sbjct: 1003 GPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ 1062
Query: 236 GPPGP------------------PGPPGPPGPPGPPGSRRA---KGPRQPSMFNG 269
GPPGP PG PGP GPPGP G + A KGP+ P+ +G
Sbjct: 1063 GPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG 1117
Score = 115 bits (288), Expect = 1e-25
Identities = 61/129 (47%), Positives = 72/129 (55%), Gaps = 22/129 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
G G PGP G GLPG G DG PGP GP KG+ G+ G++G G+ G G PGE+
Sbjct: 1420 GLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ 1479
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GEKGD GL G +G PG KG+ G G GP GPPGPPG PGP GP
Sbjct: 1480 GEKGDR---GLPGTQGSPGAKGD-------------GGIPGPAGPLGPPGPPGLPGPQGP 1523
Query: 253 PGSRRAKGP 261
G++ + GP
Sbjct: 1524 KGNKGSTGP 1532
Score = 114 bits (286), Expect = 2e-25
Identities = 66/154 (42%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G GP GP GEKG GK G G+PGA G PG G++G
Sbjct: 694 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 753
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
GE G G GP G KGEKG+ KGD+ +V
Sbjct: 754 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEV 813
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G +G+ GP GP G GP G PGP G KG
Sbjct: 814 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKG 847
Score = 113 bits (282), Expect = 5e-25
Identities = 60/139 (43%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G G G G PG G G GP GP GE+G G +G +G PG G PG G+ G
Sbjct: 897 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGL 956
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 957 PGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE----TGPIGERGHPGPPGPPGEQGLPG 1012
Query: 252 PPGSRRAKGPRQPSMFNGQ 270
G AKG P +G+
Sbjct: 1013 AAGKEGAKGDPGPQGISGK 1031
Score = 111 bits (278), Expect = 2e-24
Identities = 62/130 (47%), Positives = 70/130 (53%), Gaps = 20/130 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG PG G PG G G PG +GP+G G +G +G +G+PG AG G GE GD
Sbjct: 1081 GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1140
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+G PGQKG KGDKG+ GPPGPPG GP G PG G
Sbjct: 1141 GEIG------EPGQKGSKGDKGE-------------NGPPGPPGLQGPVGAPGIAGGDGE 1181
Query: 259 KGPR-QPSMF 267
GPR Q MF
Sbjct: 1182 PGPRGQQGMF 1191
Score = 110 bits (274), Expect = 4e-24
Identities = 62/137 (45%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---RGKMGIPGAAGNPGERG 193
L GP+GP G PG G G G GQ G +G KGE G G +G +G PG AG GE G
Sbjct: 1124 LPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG 1183
Query: 194 EKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+G G G +G+E GPPG G +G G G KG+ G GP GPPGPP
Sbjct: 1184 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGP-------PGEKGENGDVGPMGPPGPP 1236
Query: 248 GPPGPPGSRRAKGPRQP 264
GP GP G A GP+ P
Sbjct: 1237 GPRGPQGPNGADGPQGP 1253
Score = 109 bits (273), Expect = 6e-24
Identities = 55/110 (50%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG G G G G++G G+PG G+PG +G+ G
Sbjct: 1444 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1503
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPG 248
G G G GPPG G +G KG+ AG KGD G PGPPG PGPPG
Sbjct: 1504 GPAGPLGPPGPPGLPGPQGPKGN-KGSTGPAGQKGDSGLPGPPGSPGPPG 1552
Score = 108 bits (271), Expect = 1e-23
Identities = 66/162 (40%), Positives = 77/162 (47%), Gaps = 35/162 (21%)
Query: 135 ICLTGPSGPPGPPGAG---GLPGHNGLDGQ------------PGPQGPKGEKGANGKRGK 179
I L G GP GPPG G PG G G PGP GP G G +G +G+
Sbjct: 1083 IGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1142
Query: 180 MGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGD 234
+G PG G+ G++GE G G GLQG G PG G G+ G + GA+G
Sbjct: 1143 IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGF 1202
Query: 235 QGPPGP------PGPP---------GPPGPPGPPGSRRAKGP 261
GPPGP PGPP GP GPPGPPG R +GP
Sbjct: 1203 PGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1244
Score = 108 bits (270), Expect = 1e-23
Identities = 59/129 (45%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER---GEK 195
GP GPPGPPG G+ G DG+ GP+G GE G G G G PGA G PG G
Sbjct: 631 GPQGPPGPPGDDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPP 687
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
G G +G QG GPPGQ+G G +G + G KG QG PG G PG GPPG P
Sbjct: 688 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP 747
Query: 254 GSRRAKGPR 262
G G +
Sbjct: 748 GKEGQSGEK 756
Score = 108 bits (269), Expect = 2e-23
Identities = 59/122 (48%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 139 GPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANG---KRGKMGIPGAAGNPGER 192
GP+G PGP G G G GL G PG QGPKG G G G+ G G AG PG R
Sbjct: 832 GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR 891
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
G++G G G +G GP G+ G KG G G +G QGP GP G PGP GPPGP
Sbjct: 892 GQRGPTGPRGSRGARGPTGKPGPKGTSGG-DGPPGPPGERGPQGPQGPVGFPGPKGPPGP 950
Query: 253 PG 254
PG
Sbjct: 951 PG 952
Score = 107 bits (267), Expect = 3e-23
Identities = 64/144 (44%), Positives = 74/144 (51%), Gaps = 34/144 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---PGPQGPKGEKGANGK------RGKMGIPGAAGNP 189
GP G PGP G G PG +G G+ PG +G KG+KG NG +G +G PG AG
Sbjct: 1120 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGD 1179
Query: 190 GERG---------EKGDHGE---------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGA 231
GE G +KGD G +GLQG GPPG+KGE GD G + G
Sbjct: 1180 GEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM-------GP 1232
Query: 232 KGDQGPPGPPGPPGPPGPPGPPGS 255
G GP GP GP G GP GPPGS
Sbjct: 1233 PGPPGPRGPQGPNGADGPQGPPGS 1256
Score = 107 bits (266), Expect = 4e-23
Identities = 61/147 (41%), Positives = 76/147 (51%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGP---------------KGEKGANGKRGKMG 181
L G GPPG PG G G G G PGPQGP +G KG+ G++G+ G
Sbjct: 737 LPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 796
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
PG G+ G +G++G+ G++G +G +GP G KG G GD AG KG G PG P
Sbjct: 797 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG-QAGEKGKLGVPGLP 855
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 856 GYPGRQGPKGSTGFPGFPGANGEKGAR 882
Score = 106 bits (265), Expect = 5e-23
Identities = 66/165 (40%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GPPGPPG GLPG G +G G GP+G G +G G G PG G PG +G G
Sbjct: 997 GHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLK 1056
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP---------GPPGPPGP 249
G G QG GP G GE+G G + + L G G QGPPGP GP GP G
Sbjct: 1057 GGEGPQGPPGPVGSPGERGSAG-TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1115
Query: 250 PGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASE 294
G G GP P+ PGE D +G+ +K S+
Sbjct: 1116 DGVQGPVGLPGPAGPA----GSPGE----DGDKGEIGEPGQKGSK 1152
Score = 106 bits (265), Expect = 5e-23
Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 40/176 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG---EKGANGKRG------KMGIPGAAGNP 189
GP GPPG G G PG G DG+PGP+G +G +KG G RG +G+ G G P
Sbjct: 1159 GPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPP 1218
Query: 190 GERGEKGDHGEL---------------GLQGNEGPPGQ------KGEKGDKGDVSN---- 224
GE+GE GD G + G G +GPPG GEKG+ G+ N
Sbjct: 1219 GEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPP 1278
Query: 225 -DVLLAGAK---GDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGE 274
+ + G K G++G GPPG GPPG GPPG KG P F G PGE
Sbjct: 1279 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1334
Score = 106 bits (264), Expect = 6e-23
Identities = 60/143 (41%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE------------KGANGKRGKMGIPGAA 186
GP GP G PG G PG +G G PG G KG+ KG G+RG G PG
Sbjct: 580 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 639
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGDQGPPGPP 241
G+ G RGE G+ G GL G GP G G +G G + G KG+ GP G P
Sbjct: 640 GDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEP 699
Query: 242 GPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G +GP P
Sbjct: 700 GPPGQQGNPGPQGLPGPQGPIGP 722
Score = 105 bits (262), Expect = 1e-22
Identities = 69/175 (39%), Positives = 79/175 (45%), Gaps = 47/175 (26%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANG------KRGKMGI 182
I L GP GP PGP G G G G G PGPQGP+G +G G KRG+ G
Sbjct: 537 IALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGA 596
Query: 183 PGAAGNPGERGEKGDHG---------------ELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
G G PGE G KGD G E G QG GPPG G +G+ G++ L
Sbjct: 597 DGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL 656
Query: 228 --------LAGAKGDQGPPG---------PPGPP---GPPGPPGPPGSRRAKGPR 262
L G +G G PG PPGP GP G PGPPG + GP+
Sbjct: 657 PGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ 711
Score = 105 bits (261), Expect = 1e-22
Identities = 61/140 (43%), Positives = 71/140 (50%), Gaps = 25/140 (17%)
Query: 139 GPSGPPGPPGAGG---------LPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G G PG PGA G LPG G G+ GPQGP G G +G RG+ G G G P
Sbjct: 598 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLP 657
Query: 190 GE---------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
GE RG G G+ G+ G +GPPG KG G +G+ G G QG PGP
Sbjct: 658 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGE-------PGPPGQQGNPGP 710
Query: 241 PGPPGPPGPPGPPGSRRAKG 260
G PGP GP GPPG + +G
Sbjct: 711 QGLPGPQGPIGPPGEKGPQG 730
Score = 103 bits (256), Expect = 5e-22
Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 22/133 (16%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGK---MGIP---GAAG 187
L GP G PG PG PG G+DG PGP+ GP+GE G G++G G+P G G
Sbjct: 665 LLGPRGTPGAPGQ---PGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 721
Query: 188 NPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
PGE+G +G G GL G +GPPG G++G G+ KG GPPGP GP G P
Sbjct: 722 PPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE----------KGALGPPGPQGPIGYP 771
Query: 248 GPPGPPGSRRAKG 260
GP G G+ +G
Sbjct: 772 GPRGVKGADGVRG 784
Score = 102 bits (255), Expect = 7e-22
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQG---PKGEKGANGKRGK---MGIPGAAGN---P 189
G GP G PGA G PG G+DG PGP+G P+GE G G++G G+PG G P
Sbjct: 664 GLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPP 723
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
GE+G +G G GL G +GPPG G++G G+ G G QGP G PGP G G
Sbjct: 724 GEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG----ALGPPGPQGPIGYPGPRGVKGA 779
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
G G + +KG + F G
Sbjct: 780 DGVRGLKGSKGEKGEDGFPG 799
Score = 101 bits (251), Expect = 2e-21
Identities = 56/129 (43%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGEL 201
GPPGP G G PG G G G +G G+ G G RG G PG G PG+RG G G
Sbjct: 541 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 600
Query: 202 GLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G+ G PG KG++G G L G GD+G G GP GPPGPPG G R G
Sbjct: 601 GMPGE---PGAKGDRGFDG-------LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE 650
Query: 262 RQPSMFNGQ 270
P G+
Sbjct: 651 IGPRGLPGE 659
Score = 101 bits (251), Expect = 2e-21
Identities = 61/158 (38%), Positives = 72/158 (45%), Gaps = 43/158 (27%)
Query: 137 LTGPSGPPGPPGAGGL---------------PGHNGLD------------------GQPG 163
+ G G PGP G G+ PG GL G PG
Sbjct: 1175 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1234
Query: 164 PQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVS 223
P GP+G +G NG G G PG+ G+ G GEKG+ GE GN GPPG+ G G KG+
Sbjct: 1235 PPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE---AGNPGPPGEAGVGGPKGE-- 1289
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G KG+ GPPG GPPG GPPG G + GP
Sbjct: 1290 -----RGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1322
Score = 99.8 bits (247), Expect = 6e-21
Identities = 59/134 (44%), Positives = 65/134 (48%), Gaps = 28/134 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G GP G G PG G+ G GP GPKG G G+ G PG GNPG +G G
Sbjct: 661 GPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGP---PGQQGNPGPQGLPGPQ 717
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP------------GPPGP 246
G + GPPG+KG +G G LAG G GPPG P GPPGP
Sbjct: 718 GPI------GPPGEKGPQGKPG-------LAGLPGADGPPGHPGKEGQSGEKGALGPPGP 764
Query: 247 PGPPGPPGSRRAKG 260
GP G PG R KG
Sbjct: 765 QGPIGYPGPRGVKG 778
Score = 99.8 bits (247), Expect = 6e-21
Identities = 84/288 (29%), Positives = 113/288 (39%), Gaps = 65/288 (22%)
Query: 4 GAEGGRGDAGW----GLRGALAAVALLSALNAAGTVFALCQWRGLSSA--LRALEAQRGR 57
GA+G G G G +GAL + G RG+ A +R L+ +G
Sbjct: 739 GADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP-------RGVKGADGVRGLKGSKGE 791
Query: 58 EQRE-------DSALRSFLAELSR-APRGASAPPQDPASSARNKRSHSGEPAPHIRAESH 109
+ + D L+ E+ + PRG P + + +G+P P +A
Sbjct: 792 KGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGP-----EGPKGRAGPTGDPGPSGQAGEK 846
Query: 110 DMLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG 169
L + P R GP G G PG G G G G G GP+G
Sbjct: 847 GKLGVPGLPGYPGR--------------QGPKGSTGFPGFPGANGEKGARGVAGKPGPRG 892
Query: 170 EKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA 229
++G G RG G G G PG +G G G GPPG++G +G +G V
Sbjct: 893 QRGPTGPRGSRGARGPTGKPGPKGTSGGDGP------PGPPGERGPQGPQGPV------- 939
Query: 230 GAKGDQGPPGPPGPPGPPGPP------------GPPGSRRAKGPRQPS 265
G G +GPPGPPG G PG P GPPG GP+ P+
Sbjct: 940 GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPT 987
Score = 89.0 bits (219), Expect = 1e-17
Identities = 58/163 (35%), Positives = 67/163 (41%), Gaps = 43/163 (26%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ + GP GP GP G G P G GP GP G+ G G G+ G+PGA G PG G
Sbjct: 449 GMLVEGPPGPAGPAGIMGPP------GLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPG 502
Query: 194 E------------------------------------KGDHGELGLQGNEGPPGQKGEKG 217
+G G +GL G GP G G G
Sbjct: 503 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 562
Query: 218 DKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
KG+ S D G +G QGPPGP G PG G PG G R G
Sbjct: 563 AKGE-SGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 604
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 183 PGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG 242
P PG E D E + G+ G G+KG+KG+ V +L+ G G GP G G
Sbjct: 409 PNEEFGPGVPAET-DITETSINGH-GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMG 466
Query: 243 PPGPPGPPGPPGSRRAKGP 261
PPG GP GPPG +GP
Sbjct: 467 PPGLQGPTGPPGDPGDRGP 485
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 124 bits (310), Expect = 3e-28
Identities = 66/125 (52%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---NGKRGKMGIPGAAGNPGERGEK 195
G +GP GP G G PG GL G PGP G +G GA +G G MG PG G G+ G K
Sbjct: 1351 GKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSK 1410
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G+ G GL G GPPG++GEKGD+G + GAKGD G PGP GP GPPGPPG PG
Sbjct: 1411 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1469
Query: 256 RRAKG 260
+ KG
Sbjct: 1470 QGPKG 1474
Score = 122 bits (305), Expect = 1e-27
Identities = 68/144 (47%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP G GEKG G+ G G PG AG G +
Sbjct: 1177 GPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPK 1236
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP--------- 243
GE+G+ GE G G GPPG KG GD G N + G GD GPPG PGP
Sbjct: 1237 GERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV-GFPGDPGPPGEPGPAGQDGVGGD 1295
Query: 244 ------PGPPGPPGPPGSRRAKGP 261
PG PGPPGP G GP
Sbjct: 1296 KGEDGDPGQPGPPGPSGEAGPPGP 1319
Score = 119 bits (299), Expect = 6e-27
Identities = 68/137 (49%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDG---QPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP G PGP G G+ G G DG QPGP GP GE G G GK G PGAAG G +GEK
Sbjct: 1279 GPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK 1338
Query: 196 GDHGE------------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
G GE +G QG G PG +G +G G V L GA G GPPGP GP
Sbjct: 1339 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQG-LPGAAGQDGPPGPMGP 1397
Query: 244 PGPPGPPGPPGSRRAKG 260
PG PG G PGS+ KG
Sbjct: 1398 PGLPGLKGDPGSKGEKG 1414
Score = 118 bits (296), Expect = 1e-26
Identities = 71/175 (40%), Positives = 84/175 (48%), Gaps = 44/175 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQP---------------GPQGPKGEKGANGKRGKMGIP 183
GP GPPGPPG GLPGH G G+ GPQGP GE G G+RG G P
Sbjct: 892 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPP 951
Query: 184 GAAGN------PGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQ 235
G G G+ G KGD G G+ G +GP G +G G++G L G +G Q
Sbjct: 952 GPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ 1011
Query: 236 GPPGP------------------PGPPGPPGPPGPPGSRRA---KGPRQPSMFNG 269
GPPGP PG PGP GPPGP G + A KGP+ P+ +G
Sbjct: 1012 GPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG 1066
Score = 115 bits (288), Expect = 1e-25
Identities = 61/129 (47%), Positives = 72/129 (55%), Gaps = 22/129 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
G G PGP G GLPG G DG PGP GP KG+ G+ G++G G+ G G PGE+
Sbjct: 1369 GLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ 1428
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GEKGD GL G +G PG KG+ G G GP GPPGPPG PGP GP
Sbjct: 1429 GEKGDR---GLPGTQGSPGAKGD-------------GGIPGPAGPLGPPGPPGLPGPQGP 1472
Query: 253 PGSRRAKGP 261
G++ + GP
Sbjct: 1473 KGNKGSTGP 1481
Score = 114 bits (286), Expect = 2e-25
Identities = 66/154 (42%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G GP GP GEKG GK G G+PGA G PG G++G
Sbjct: 643 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 702
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
GE G G GP G KGEKG+ KGD+ +V
Sbjct: 703 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEV 762
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G +G+ GP GP G GP G PGP G KG
Sbjct: 763 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKG 796
Score = 113 bits (282), Expect = 5e-25
Identities = 60/139 (43%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G G G G PG G G GP GP GE+G G +G +G PG G PG G+ G
Sbjct: 846 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGL 905
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 906 PGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE----TGPIGERGHPGPPGPPGEQGLPG 961
Query: 252 PPGSRRAKGPRQPSMFNGQ 270
G AKG P +G+
Sbjct: 962 AAGKEGAKGDPGPQGISGK 980
Score = 111 bits (278), Expect = 2e-24
Identities = 62/130 (47%), Positives = 70/130 (53%), Gaps = 20/130 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG PG G PG G G PG +GP+G G +G +G +G+PG AG G GE GD
Sbjct: 1030 GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1089
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+G PGQKG KGDKG+ GPPGPPG GP G PG G
Sbjct: 1090 GEIG------EPGQKGSKGDKGE-------------NGPPGPPGLQGPVGAPGIAGGDGE 1130
Query: 259 KGPR-QPSMF 267
GPR Q MF
Sbjct: 1131 PGPRGQQGMF 1140
Score = 110 bits (274), Expect = 4e-24
Identities = 62/137 (45%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---RGKMGIPGAAGNPGERG 193
L GP+GP G PG G G G GQ G +G KGE G G +G +G PG AG GE G
Sbjct: 1073 LPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG 1132
Query: 194 EKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+G G G +G+E GPPG G +G G G KG+ G GP GPPGPP
Sbjct: 1133 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGP-------PGEKGENGDVGPMGPPGPP 1185
Query: 248 GPPGPPGSRRAKGPRQP 264
GP GP G A GP+ P
Sbjct: 1186 GPRGPQGPNGADGPQGP 1202
Score = 109 bits (273), Expect = 6e-24
Identities = 55/110 (50%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG G G G G++G G+PG G+PG +G+ G
Sbjct: 1393 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1452
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPG 248
G G G GPPG G +G KG+ AG KGD G PGPPG PGPPG
Sbjct: 1453 GPAGPLGPPGPPGLPGPQGPKGN-KGSTGPAGQKGDSGLPGPPGSPGPPG 1501
Score = 108 bits (271), Expect = 1e-23
Identities = 66/162 (40%), Positives = 77/162 (47%), Gaps = 35/162 (21%)
Query: 135 ICLTGPSGPPGPPGAG---GLPGHNGLDGQ------------PGPQGPKGEKGANGKRGK 179
I L G GP GPPG G PG G G PGP GP G G +G +G+
Sbjct: 1032 IGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1091
Query: 180 MGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGD 234
+G PG G+ G++GE G G GLQG G PG G G+ G + GA+G
Sbjct: 1092 IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGF 1151
Query: 235 QGPPGP------PGPP---------GPPGPPGPPGSRRAKGP 261
GPPGP PGPP GP GPPGPPG R +GP
Sbjct: 1152 PGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1193
Score = 108 bits (270), Expect = 1e-23
Identities = 59/129 (45%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER---GEK 195
GP GPPGPPG G+ G DG+ GP+G GE G G G G PGA G PG G
Sbjct: 580 GPQGPPGPPGDDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPP 636
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
G G +G QG GPPGQ+G G +G + G KG QG PG G PG GPPG P
Sbjct: 637 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP 696
Query: 254 GSRRAKGPR 262
G G +
Sbjct: 697 GKEGQSGEK 705
Score = 108 bits (269), Expect = 2e-23
Identities = 59/122 (48%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 139 GPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANG---KRGKMGIPGAAGNPGER 192
GP+G PGP G G G GL G PG QGPKG G G G+ G G AG PG R
Sbjct: 781 GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR 840
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
G++G G G +G GP G+ G KG G G +G QGP GP G PGP GPPGP
Sbjct: 841 GQRGPTGPRGSRGARGPTGKPGPKGTSGG-DGPPGPPGERGPQGPQGPVGFPGPKGPPGP 899
Query: 253 PG 254
PG
Sbjct: 900 PG 901
Score = 107 bits (267), Expect = 3e-23
Identities = 64/144 (44%), Positives = 74/144 (51%), Gaps = 34/144 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---PGPQGPKGEKGANGK------RGKMGIPGAAGNP 189
GP G PGP G G PG +G G+ PG +G KG+KG NG +G +G PG AG
Sbjct: 1069 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGD 1128
Query: 190 GERG---------EKGDHGE---------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGA 231
GE G +KGD G +GLQG GPPG+KGE GD G + G
Sbjct: 1129 GEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM-------GP 1181
Query: 232 KGDQGPPGPPGPPGPPGPPGPPGS 255
G GP GP GP G GP GPPGS
Sbjct: 1182 PGPPGPRGPQGPNGADGPQGPPGS 1205
Score = 107 bits (266), Expect = 4e-23
Identities = 61/147 (41%), Positives = 76/147 (51%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGP---------------KGEKGANGKRGKMG 181
L G GPPG PG G G G G PGPQGP +G KG+ G++G+ G
Sbjct: 686 LPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 745
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
PG G+ G +G++G+ G++G +G +GP G KG G GD AG KG G PG P
Sbjct: 746 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG-QAGEKGKLGVPGLP 804
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 805 GYPGRQGPKGSTGFPGFPGANGEKGAR 831
Score = 106 bits (265), Expect = 5e-23
Identities = 66/165 (40%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GPPGPPG GLPG G +G G GP+G G +G G G PG G PG +G G
Sbjct: 946 GHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLK 1005
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP---------GPPGPPGP 249
G G QG GP G GE+G G + + L G G QGPPGP GP GP G
Sbjct: 1006 GGEGPQGPPGPVGSPGERGSAG-TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1064
Query: 250 PGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASE 294
G G GP P+ PGE D +G+ +K S+
Sbjct: 1065 DGVQGPVGLPGPAGPA----GSPGE----DGDKGEIGEPGQKGSK 1101
Score = 106 bits (265), Expect = 5e-23
Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 40/176 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG---EKGANGKRG------KMGIPGAAGNP 189
GP GPPG G G PG G DG+PGP+G +G +KG G RG +G+ G G P
Sbjct: 1108 GPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPP 1167
Query: 190 GERGEKGDHGEL---------------GLQGNEGPPGQ------KGEKGDKGDVSN---- 224
GE+GE GD G + G G +GPPG GEKG+ G+ N
Sbjct: 1168 GEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPP 1227
Query: 225 -DVLLAGAK---GDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGE 274
+ + G K G++G GPPG GPPG GPPG KG P F G PGE
Sbjct: 1228 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1283
Score = 106 bits (264), Expect = 6e-23
Identities = 60/143 (41%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE------------KGANGKRGKMGIPGAA 186
GP GP G PG G PG +G G PG G KG+ KG G+RG G PG
Sbjct: 529 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 588
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGDQGPPGPP 241
G+ G RGE G+ G GL G GP G G +G G + G KG+ GP G P
Sbjct: 589 GDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEP 648
Query: 242 GPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G +GP P
Sbjct: 649 GPPGQQGNPGPQGLPGPQGPIGP 671
Score = 105 bits (262), Expect = 1e-22
Identities = 69/175 (39%), Positives = 79/175 (45%), Gaps = 47/175 (26%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANG------KRGKMGI 182
I L GP GP PGP G G G G G PGPQGP+G +G G KRG+ G
Sbjct: 486 IALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGA 545
Query: 183 PGAAGNPGERGEKGDHG---------------ELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
G G PGE G KGD G E G QG GPPG G +G+ G++ L
Sbjct: 546 DGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL 605
Query: 228 --------LAGAKGDQGPPG---------PPGPP---GPPGPPGPPGSRRAKGPR 262
L G +G G PG PPGP GP G PGPPG + GP+
Sbjct: 606 PGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ 660
Score = 105 bits (261), Expect = 1e-22
Identities = 61/140 (43%), Positives = 71/140 (50%), Gaps = 25/140 (17%)
Query: 139 GPSGPPGPPGAGG---------LPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G G PG PGA G LPG G G+ GPQGP G G +G RG+ G G G P
Sbjct: 547 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLP 606
Query: 190 GE---------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
GE RG G G+ G+ G +GPPG KG G +G+ G G QG PGP
Sbjct: 607 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGE-------PGPPGQQGNPGP 659
Query: 241 PGPPGPPGPPGPPGSRRAKG 260
G PGP GP GPPG + +G
Sbjct: 660 QGLPGPQGPIGPPGEKGPQG 679
Score = 103 bits (256), Expect = 5e-22
Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 22/133 (16%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGK---MGIP---GAAG 187
L GP G PG PG PG G+DG PGP+ GP+GE G G++G G+P G G
Sbjct: 614 LLGPRGTPGAPGQ---PGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 670
Query: 188 NPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
PGE+G +G G GL G +GPPG G++G G+ KG GPPGP GP G P
Sbjct: 671 PPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE----------KGALGPPGPQGPIGYP 720
Query: 248 GPPGPPGSRRAKG 260
GP G G+ +G
Sbjct: 721 GPRGVKGADGVRG 733
Score = 102 bits (255), Expect = 7e-22
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQG---PKGEKGANGKRGK---MGIPGAAGN---P 189
G GP G PGA G PG G+DG PGP+G P+GE G G++G G+PG G P
Sbjct: 613 GLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPP 672
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
GE+G +G G GL G +GPPG G++G G+ G G QGP G PGP G G
Sbjct: 673 GEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG----ALGPPGPQGPIGYPGPRGVKGA 728
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
G G + +KG + F G
Sbjct: 729 DGVRGLKGSKGEKGEDGFPG 748
Score = 101 bits (251), Expect = 2e-21
Identities = 56/129 (43%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGEL 201
GPPGP G G PG G G G +G G+ G G RG G PG G PG+RG G G
Sbjct: 490 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 549
Query: 202 GLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G+ G PG KG++G G L G GD+G G GP GPPGPPG G R G
Sbjct: 550 GMPGE---PGAKGDRGFDG-------LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE 599
Query: 262 RQPSMFNGQ 270
P G+
Sbjct: 600 IGPRGLPGE 608
Score = 101 bits (251), Expect = 2e-21
Identities = 61/158 (38%), Positives = 72/158 (45%), Gaps = 43/158 (27%)
Query: 137 LTGPSGPPGPPGAGGL---------------PGHNGLD------------------GQPG 163
+ G G PGP G G+ PG GL G PG
Sbjct: 1124 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1183
Query: 164 PQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVS 223
P GP+G +G NG G G PG+ G+ G GEKG+ GE GN GPPG+ G G KG+
Sbjct: 1184 PPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE---AGNPGPPGEAGVGGPKGE-- 1238
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G KG+ GPPG GPPG GPPG G + GP
Sbjct: 1239 -----RGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1271
Score = 99.8 bits (247), Expect = 6e-21
Identities = 59/134 (44%), Positives = 65/134 (48%), Gaps = 28/134 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G GP G G PG G+ G GP GPKG G G+ G PG GNPG +G G
Sbjct: 610 GPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGP---PGQQGNPGPQGLPGPQ 666
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP------------GPPGP 246
G + GPPG+KG +G G LAG G GPPG P GPPGP
Sbjct: 667 GPI------GPPGEKGPQGKPG-------LAGLPGADGPPGHPGKEGQSGEKGALGPPGP 713
Query: 247 PGPPGPPGSRRAKG 260
GP G PG R KG
Sbjct: 714 QGPIGYPGPRGVKG 727
Score = 99.8 bits (247), Expect = 6e-21
Identities = 84/288 (29%), Positives = 113/288 (39%), Gaps = 65/288 (22%)
Query: 4 GAEGGRGDAGW----GLRGALAAVALLSALNAAGTVFALCQWRGLSSA--LRALEAQRGR 57
GA+G G G G +GAL + G RG+ A +R L+ +G
Sbjct: 688 GADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP-------RGVKGADGVRGLKGSKGE 740
Query: 58 EQRE-------DSALRSFLAELSR-APRGASAPPQDPASSARNKRSHSGEPAPHIRAESH 109
+ + D L+ E+ + PRG P + + +G+P P +A
Sbjct: 741 KGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGP-----EGPKGRAGPTGDPGPSGQAGEK 795
Query: 110 DMLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG 169
L + P R GP G G PG G G G G G GP+G
Sbjct: 796 GKLGVPGLPGYPGR--------------QGPKGSTGFPGFPGANGEKGARGVAGKPGPRG 841
Query: 170 EKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA 229
++G G RG G G G PG +G G G GPPG++G +G +G V
Sbjct: 842 QRGPTGPRGSRGARGPTGKPGPKGTSGGDGP------PGPPGERGPQGPQGPV------- 888
Query: 230 GAKGDQGPPGPPGPPGPPGPP------------GPPGSRRAKGPRQPS 265
G G +GPPGPPG G PG P GPPG GP+ P+
Sbjct: 889 GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPT 936
Score = 89.0 bits (219), Expect = 1e-17
Identities = 58/163 (35%), Positives = 67/163 (41%), Gaps = 43/163 (26%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ + GP GP GP G G P G GP GP G+ G G G+ G+PGA G PG G
Sbjct: 398 GMLVEGPPGPAGPAGIMGPP------GLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPG 451
Query: 194 E------------------------------------KGDHGELGLQGNEGPPGQKGEKG 217
+G G +GL G GP G G G
Sbjct: 452 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 511
Query: 218 DKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
KG+ S D G +G QGPPGP G PG G PG G R G
Sbjct: 512 AKGE-SGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 553
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 183 PGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG 242
P PG E D E + G+ G G+KG+KG+ V +L+ G G GP G G
Sbjct: 358 PNEEFGPGVPAET-DITETSINGH-GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMG 415
Query: 243 PPGPPGPPGPPGSRRAKGP 261
PPG GP GPPG +GP
Sbjct: 416 PPGLQGPTGPPGDPGDRGP 434
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 124 bits (310), Expect = 3e-28
Identities = 66/125 (52%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---NGKRGKMGIPGAAGNPGERGEK 195
G +GP GP G G PG GL G PGP G +G GA +G G MG PG G G+ G K
Sbjct: 1390 GKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSK 1449
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G+ G GL G GPPG++GEKGD+G + GAKGD G PGP GP GPPGPPG PG
Sbjct: 1450 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1508
Query: 256 RRAKG 260
+ KG
Sbjct: 1509 QGPKG 1513
Score = 122 bits (305), Expect = 1e-27
Identities = 68/144 (47%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP G GEKG G+ G G PG AG G +
Sbjct: 1216 GPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPK 1275
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP--------- 243
GE+G+ GE G G GPPG KG GD G N + G GD GPPG PGP
Sbjct: 1276 GERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV-GFPGDPGPPGEPGPAGQDGVGGD 1334
Query: 244 ------PGPPGPPGPPGSRRAKGP 261
PG PGPPGP G GP
Sbjct: 1335 KGEDGDPGQPGPPGPSGEAGPPGP 1358
Score = 119 bits (299), Expect = 6e-27
Identities = 68/137 (49%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDG---QPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP G PGP G G+ G G DG QPGP GP GE G G GK G PGAAG G +GEK
Sbjct: 1318 GPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK 1377
Query: 196 GDHGE------------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
G GE +G QG G PG +G +G G V L GA G GPPGP GP
Sbjct: 1378 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQG-LPGAAGQDGPPGPMGP 1436
Query: 244 PGPPGPPGPPGSRRAKG 260
PG PG G PGS+ KG
Sbjct: 1437 PGLPGLKGDPGSKGEKG 1453
Score = 118 bits (296), Expect = 1e-26
Identities = 71/175 (40%), Positives = 84/175 (48%), Gaps = 44/175 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQP---------------GPQGPKGEKGANGKRGKMGIP 183
GP GPPGPPG GLPGH G G+ GPQGP GE G G+RG G P
Sbjct: 931 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPP 990
Query: 184 GAAGN------PGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQ 235
G G G+ G KGD G G+ G +GP G +G G++G L G +G Q
Sbjct: 991 GPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ 1050
Query: 236 GPPGP------------------PGPPGPPGPPGPPGSRRA---KGPRQPSMFNG 269
GPPGP PG PGP GPPGP G + A KGP+ P+ +G
Sbjct: 1051 GPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG 1105
Score = 115 bits (288), Expect = 1e-25
Identities = 61/129 (47%), Positives = 72/129 (55%), Gaps = 22/129 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------KGEKGANGKRGKMGIPGAAGNPGER 192
G G PGP G GLPG G DG PGP GP KG+ G+ G++G G+ G G PGE+
Sbjct: 1408 GLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ 1467
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GEKGD GL G +G PG KG+ G G GP GPPGPPG PGP GP
Sbjct: 1468 GEKGDR---GLPGTQGSPGAKGD-------------GGIPGPAGPLGPPGPPGLPGPQGP 1511
Query: 253 PGSRRAKGP 261
G++ + GP
Sbjct: 1512 KGNKGSTGP 1520
Score = 114 bits (286), Expect = 2e-25
Identities = 66/154 (42%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G GP GP GEKG GK G G+PGA G PG G++G
Sbjct: 682 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 741
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
GE G G GP G KGEKG+ KGD+ +V
Sbjct: 742 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEV 801
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G +G+ GP GP G GP G PGP G KG
Sbjct: 802 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKG 835
Score = 113 bits (282), Expect = 5e-25
Identities = 60/139 (43%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G G G G PG G G GP GP GE+G G +G +G PG G PG G+ G
Sbjct: 885 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGL 944
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 945 PGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE----TGPIGERGHPGPPGPPGEQGLPG 1000
Query: 252 PPGSRRAKGPRQPSMFNGQ 270
G AKG P +G+
Sbjct: 1001 AAGKEGAKGDPGPQGISGK 1019
Score = 111 bits (278), Expect = 2e-24
Identities = 62/130 (47%), Positives = 70/130 (53%), Gaps = 20/130 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG PG G PG G G PG +GP+G G +G +G +G+PG AG G GE GD
Sbjct: 1069 GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1128
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+G PGQKG KGDKG+ GPPGPPG GP G PG G
Sbjct: 1129 GEIG------EPGQKGSKGDKGE-------------NGPPGPPGLQGPVGAPGIAGGDGE 1169
Query: 259 KGPR-QPSMF 267
GPR Q MF
Sbjct: 1170 PGPRGQQGMF 1179
Score = 110 bits (274), Expect = 4e-24
Identities = 62/137 (45%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---RGKMGIPGAAGNPGERG 193
L GP+GP G PG G G G GQ G +G KGE G G +G +G PG AG GE G
Sbjct: 1112 LPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG 1171
Query: 194 EKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+G G G +G+E GPPG G +G G G KG+ G GP GPPGPP
Sbjct: 1172 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGP-------PGEKGENGDVGPMGPPGPP 1224
Query: 248 GPPGPPGSRRAKGPRQP 264
GP GP G A GP+ P
Sbjct: 1225 GPRGPQGPNGADGPQGP 1241
Score = 109 bits (273), Expect = 6e-24
Identities = 55/110 (50%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG G G G G++G G+PG G+PG +G+ G
Sbjct: 1432 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1491
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPG 248
G G G GPPG G +G KG+ AG KGD G PGPPG PGPPG
Sbjct: 1492 GPAGPLGPPGPPGLPGPQGPKGN-KGSTGPAGQKGDSGLPGPPGSPGPPG 1540
Score = 108 bits (271), Expect = 1e-23
Identities = 66/162 (40%), Positives = 77/162 (47%), Gaps = 35/162 (21%)
Query: 135 ICLTGPSGPPGPPGAG---GLPGHNGLDGQ------------PGPQGPKGEKGANGKRGK 179
I L G GP GPPG G PG G G PGP GP G G +G +G+
Sbjct: 1071 IGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1130
Query: 180 MGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGD 234
+G PG G+ G++GE G G GLQG G PG G G+ G + GA+G
Sbjct: 1131 IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGF 1190
Query: 235 QGPPGP------PGPP---------GPPGPPGPPGSRRAKGP 261
GPPGP PGPP GP GPPGPPG R +GP
Sbjct: 1191 PGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1232
Score = 108 bits (270), Expect = 1e-23
Identities = 59/129 (45%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER---GEK 195
GP GPPGPPG G+ G DG+ GP+G GE G G G G PGA G PG G
Sbjct: 619 GPQGPPGPPGDDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPP 675
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
G G +G QG GPPGQ+G G +G + G KG QG PG G PG GPPG P
Sbjct: 676 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP 735
Query: 254 GSRRAKGPR 262
G G +
Sbjct: 736 GKEGQSGEK 744
Score = 108 bits (269), Expect = 2e-23
Identities = 59/122 (48%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 139 GPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANG---KRGKMGIPGAAGNPGER 192
GP+G PGP G G G GL G PG QGPKG G G G+ G G AG PG R
Sbjct: 820 GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR 879
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
G++G G G +G GP G+ G KG G G +G QGP GP G PGP GPPGP
Sbjct: 880 GQRGPTGPRGSRGARGPTGKPGPKGTSGG-DGPPGPPGERGPQGPQGPVGFPGPKGPPGP 938
Query: 253 PG 254
PG
Sbjct: 939 PG 940
Score = 107 bits (267), Expect = 3e-23
Identities = 64/144 (44%), Positives = 74/144 (51%), Gaps = 34/144 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---PGPQGPKGEKGANGK------RGKMGIPGAAGNP 189
GP G PGP G G PG +G G+ PG +G KG+KG NG +G +G PG AG
Sbjct: 1108 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGD 1167
Query: 190 GERG---------EKGDHGE---------LGLQGNEGPPGQKGEKGDKGDVSNDVLLAGA 231
GE G +KGD G +GLQG GPPG+KGE GD G + G
Sbjct: 1168 GEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM-------GP 1220
Query: 232 KGDQGPPGPPGPPGPPGPPGPPGS 255
G GP GP GP G GP GPPGS
Sbjct: 1221 PGPPGPRGPQGPNGADGPQGPPGS 1244
Score = 107 bits (266), Expect = 4e-23
Identities = 61/147 (41%), Positives = 76/147 (51%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGP---------------KGEKGANGKRGKMG 181
L G GPPG PG G G G G PGPQGP +G KG+ G++G+ G
Sbjct: 725 LPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 784
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
PG G+ G +G++G+ G++G +G +GP G KG G GD AG KG G PG P
Sbjct: 785 FPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG-QAGEKGKLGVPGLP 843
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 844 GYPGRQGPKGSTGFPGFPGANGEKGAR 870
Score = 106 bits (265), Expect = 5e-23
Identities = 66/165 (40%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GPPGPPG GLPG G +G G GP+G G +G G G PG G PG +G G
Sbjct: 985 GHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLK 1044
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP---------GPPGPPGP 249
G G QG GP G GE+G G + + L G G QGPPGP GP GP G
Sbjct: 1045 GGEGPQGPPGPVGSPGERGSAG-TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1103
Query: 250 PGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADEKASE 294
G G GP P+ PGE D +G+ +K S+
Sbjct: 1104 DGVQGPVGLPGPAGPA----GSPGE----DGDKGEIGEPGQKGSK 1140
Score = 106 bits (265), Expect = 5e-23
Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 40/176 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG---EKGANGKRG------KMGIPGAAGNP 189
GP GPPG G G PG G DG+PGP+G +G +KG G RG +G+ G G P
Sbjct: 1147 GPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPP 1206
Query: 190 GERGEKGDHGEL---------------GLQGNEGPPGQ------KGEKGDKGDVSN---- 224
GE+GE GD G + G G +GPPG GEKG+ G+ N
Sbjct: 1207 GEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPP 1266
Query: 225 -DVLLAGAK---GDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGE 274
+ + G K G++G GPPG GPPG GPPG KG P F G PGE
Sbjct: 1267 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1322
Score = 106 bits (264), Expect = 6e-23
Identities = 60/143 (41%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE------------KGANGKRGKMGIPGAA 186
GP GP G PG G PG +G G PG G KG+ KG G+RG G PG
Sbjct: 568 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 627
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA-----GAKGDQGPPGPP 241
G+ G RGE G+ G GL G GP G G +G G + G KG+ GP G P
Sbjct: 628 GDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEP 687
Query: 242 GPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G +GP P
Sbjct: 688 GPPGQQGNPGPQGLPGPQGPIGP 710
Score = 105 bits (262), Expect = 1e-22
Identities = 69/175 (39%), Positives = 79/175 (45%), Gaps = 47/175 (26%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANG------KRGKMGI 182
I L GP GP PGP G G G G G PGPQGP+G +G G KRG+ G
Sbjct: 525 IALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGA 584
Query: 183 PGAAGNPGERGEKGDHG---------------ELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
G G PGE G KGD G E G QG GPPG G +G+ G++ L
Sbjct: 585 DGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL 644
Query: 228 --------LAGAKGDQGPPG---------PPGPP---GPPGPPGPPGSRRAKGPR 262
L G +G G PG PPGP GP G PGPPG + GP+
Sbjct: 645 PGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ 699
Score = 105 bits (261), Expect = 1e-22
Identities = 61/140 (43%), Positives = 71/140 (50%), Gaps = 25/140 (17%)
Query: 139 GPSGPPGPPGAGG---------LPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G G PG PGA G LPG G G+ GPQGP G G +G RG+ G G G P
Sbjct: 586 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLP 645
Query: 190 GE---------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
GE RG G G+ G+ G +GPPG KG G +G+ G G QG PGP
Sbjct: 646 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGE-------PGPPGQQGNPGP 698
Query: 241 PGPPGPPGPPGPPGSRRAKG 260
G PGP GP GPPG + +G
Sbjct: 699 QGLPGPQGPIGPPGEKGPQG 718
Score = 103 bits (256), Expect = 5e-22
Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 22/133 (16%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGK---MGIP---GAAG 187
L GP G PG PG PG G+DG PGP+ GP+GE G G++G G+P G G
Sbjct: 653 LLGPRGTPGAPGQ---PGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 709
Query: 188 NPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
PGE+G +G G GL G +GPPG G++G G+ KG GPPGP GP G P
Sbjct: 710 PPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE----------KGALGPPGPQGPIGYP 759
Query: 248 GPPGPPGSRRAKG 260
GP G G+ +G
Sbjct: 760 GPRGVKGADGVRG 772
Score = 102 bits (255), Expect = 7e-22
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQG---PKGEKGANGKRGK---MGIPGAAGN---P 189
G GP G PGA G PG G+DG PGP+G P+GE G G++G G+PG G P
Sbjct: 652 GLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPP 711
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
GE+G +G G GL G +GPPG G++G G+ G G QGP G PGP G G
Sbjct: 712 GEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG----ALGPPGPQGPIGYPGPRGVKGA 767
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
G G + +KG + F G
Sbjct: 768 DGVRGLKGSKGEKGEDGFPG 787
Score = 101 bits (251), Expect = 2e-21
Identities = 56/129 (43%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGEL 201
GPPGP G G PG G G G +G G+ G G RG G PG G PG+RG G G
Sbjct: 529 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 588
Query: 202 GLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G+ G PG KG++G G L G GD+G G GP GPPGPPG G R G
Sbjct: 589 GMPGE---PGAKGDRGFDG-------LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE 638
Query: 262 RQPSMFNGQ 270
P G+
Sbjct: 639 IGPRGLPGE 647
Score = 101 bits (251), Expect = 2e-21
Identities = 61/158 (38%), Positives = 72/158 (45%), Gaps = 43/158 (27%)
Query: 137 LTGPSGPPGPPGAGGL---------------PGHNGLD------------------GQPG 163
+ G G PGP G G+ PG GL G PG
Sbjct: 1163 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1222
Query: 164 PQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVS 223
P GP+G +G NG G G PG+ G+ G GEKG+ GE GN GPPG+ G G KG+
Sbjct: 1223 PPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE---AGNPGPPGEAGVGGPKGE-- 1277
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
G KG+ GPPG GPPG GPPG G + GP
Sbjct: 1278 -----RGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP 1310
Score = 99.8 bits (247), Expect = 6e-21
Identities = 59/134 (44%), Positives = 65/134 (48%), Gaps = 28/134 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G GP G G PG G+ G GP GPKG G G+ G PG GNPG +G G
Sbjct: 649 GPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGP---PGQQGNPGPQGLPGPQ 705
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP------------GPPGP 246
G + GPPG+KG +G G LAG G GPPG P GPPGP
Sbjct: 706 GPI------GPPGEKGPQGKPG-------LAGLPGADGPPGHPGKEGQSGEKGALGPPGP 752
Query: 247 PGPPGPPGSRRAKG 260
GP G PG R KG
Sbjct: 753 QGPIGYPGPRGVKG 766
Score = 99.8 bits (247), Expect = 6e-21
Identities = 84/288 (29%), Positives = 113/288 (39%), Gaps = 65/288 (22%)
Query: 4 GAEGGRGDAGW----GLRGALAAVALLSALNAAGTVFALCQWRGLSSA--LRALEAQRGR 57
GA+G G G G +GAL + G RG+ A +R L+ +G
Sbjct: 727 GADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP-------RGVKGADGVRGLKGSKGE 779
Query: 58 EQRE-------DSALRSFLAELSR-APRGASAPPQDPASSARNKRSHSGEPAPHIRAESH 109
+ + D L+ E+ + PRG P + + +G+P P +A
Sbjct: 780 KGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGP-----EGPKGRAGPTGDPGPSGQAGEK 834
Query: 110 DMLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG 169
L + P R GP G G PG G G G G G GP+G
Sbjct: 835 GKLGVPGLPGYPGR--------------QGPKGSTGFPGFPGANGEKGARGVAGKPGPRG 880
Query: 170 EKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA 229
++G G RG G G G PG +G G G GPPG++G +G +G V
Sbjct: 881 QRGPTGPRGSRGARGPTGKPGPKGTSGGDGP------PGPPGERGPQGPQGPV------- 927
Query: 230 GAKGDQGPPGPPGPPGPPGPP------------GPPGSRRAKGPRQPS 265
G G +GPPGPPG G PG P GPPG GP+ P+
Sbjct: 928 GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPT 975
Score = 89.0 bits (219), Expect = 1e-17
Identities = 58/163 (35%), Positives = 67/163 (41%), Gaps = 43/163 (26%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ + GP GP GP G G P G GP GP G+ G G G+ G+PGA G PG G
Sbjct: 437 GMLVEGPPGPAGPAGIMGPP------GLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPG 490
Query: 194 E------------------------------------KGDHGELGLQGNEGPPGQKGEKG 217
+G G +GL G GP G G G
Sbjct: 491 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 550
Query: 218 DKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
KG+ S D G +G QGPPGP G PG G PG G R G
Sbjct: 551 AKGE-SGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 592
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 183 PGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG 242
P PG E D E + G+ G G+KG+KG+ V +L+ G G GP G G
Sbjct: 397 PNEEFGPGVPAET-DITETSINGH-GAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMG 454
Query: 243 PPGPPGPPGPPGSRRAKGP 261
PPG GP GPPG +GP
Sbjct: 455 PPGLQGPTGPPGDPGDRGP 473
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 124 bits (310), Expect = 3e-28
Identities = 71/145 (48%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ------GPKGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP GP GEKG G+ G GI G G G R
Sbjct: 1088 GPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPR 1147
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GE+G+ GE G G GPPG KG GD G KG+ GP G PG PGPPG GP
Sbjct: 1148 GERGEKGESGQPGEPGPPGPKGPTGDD----------GPKGNPGPVGFPGDPGPPGEGGP 1197
Query: 253 PGSRRAKGPRQPSMFNGQ--CPGET 275
G AKG R GQ PG T
Sbjct: 1198 RGQDGAKGDRGEDGEPGQPGSPGPT 1222
Score = 120 bits (302), Expect = 2e-27
Identities = 62/122 (50%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GPSGPPGP G+ G G G G GP G G +G G G+ G+PG G G G G
Sbjct: 920 GPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQ 979
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G +GL G GPPG GE GDKG+V D G KG++G GPPGPPGP GP G PG+ A
Sbjct: 980 GPVGLPGPAGPPGVAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGA 1038
Query: 259 KG 260
G
Sbjct: 1039 DG 1040
Score = 119 bits (298), Expect = 7e-27
Identities = 80/213 (37%), Positives = 97/213 (45%), Gaps = 42/213 (19%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGAN------GKRGKMGI 182
+ L GP GP PGP G G PG G G GPQGP+G +G G+RG+ G
Sbjct: 397 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGA 456
Query: 183 PGAAGNPGE---------------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
GA G PG+ GEKG G+ G QG GPPG+ GE+GD G++
Sbjct: 457 DGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP--- 513
Query: 228 LAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ-----CPGE-----TCA 277
G G+ GP G GP GPPG PGPPG R GP+ P G PG+ T
Sbjct: 514 -RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQG 572
Query: 278 IPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+P +G EK + P M S G P
Sbjct: 573 LPGPQGAIGPHGEKGPQ-GKPGLPGMPGSDGPP 604
Score = 119 bits (297), Expect = 9e-27
Identities = 61/132 (46%), Positives = 73/132 (55%), Gaps = 19/132 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---------PGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G +GPPGP G GLPG +G G+ PGP GP+G G NG G G PG GN
Sbjct: 1061 GFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL 1120
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
G GEKG+ GE G G +G PG KG +G++G+ KG+ G PG PGPPGP GP
Sbjct: 1121 GPPGEKGEPGESGSPGIQGEPGVKGPRGERGE----------KGESGQPGEPGPPGPKGP 1170
Query: 250 PGPPGSRRAKGP 261
G G + GP
Sbjct: 1171 TGDDGPKGNPGP 1182
Score = 115 bits (288), Expect = 1e-25
Identities = 61/127 (48%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD 197
TGP G G PG G PG GL G G +G KG+ G G GK G G G PGERG G
Sbjct: 850 TGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 909
Query: 198 HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRR 257
G GL+GNEGP G G G G+ GA G GP GPPG PGP GPPG G +
Sbjct: 910 AGGPGLKGNEGPSGPPGPAGSPGE-------RGAAGSGGPIGPPGRPGPQGPPGAAGEKG 962
Query: 258 AKGPRQP 264
G + P
Sbjct: 963 VPGEKGP 969
Score = 115 bits (288), Expect = 1e-25
Identities = 61/126 (48%), Positives = 70/126 (55%), Gaps = 19/126 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG +GP G G +G +G +G+PG AG PG GE GD
Sbjct: 941 GPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK 1000
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+ G PGQKG KG+ KG+ GPPGPPGP GP G PG G+
Sbjct: 1001 GEV------GDPGQKGTKGN-------------KGEHGPPGPPGPIGPVGQPGAAGADGE 1041
Query: 259 KGPRQP 264
G R P
Sbjct: 1042 PGARGP 1047
Score = 114 bits (286), Expect = 2e-25
Identities = 65/154 (42%), Positives = 76/154 (49%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G G GP GEKG GK G G+PG+ G PG G++G
Sbjct: 554 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPP 613
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
G G QG GP G KGEKG+ KGD+ +V
Sbjct: 614 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 673
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
+ G++G+ GP GP G GP G PGPPG KG
Sbjct: 674 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKG 707
Score = 114 bits (286), Expect = 2e-25
Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ GP G G PG G PG G G GP+G +GEKG +G+ G+ G PG G G+ G
Sbjct: 1116 GVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG 1175
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
KG+ G +G G+ GPPG+ G +G G G +G+ G PG PG PGP G GPP
Sbjct: 1176 PKGNPGPVGFPGDPGPPGEGGPRGQDG-------AKGDRGEDGEPGQPGSPGPTGENGPP 1228
Query: 254 GSRRAKGP 261
G +GP
Sbjct: 1229 GPLGKRGP 1236
Score = 114 bits (286), Expect = 2e-25
Identities = 64/135 (47%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE---K 195
G +GP GP G G PG +GL G PG G +G GA G+ G G G G PG RG+ K
Sbjct: 1262 GKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1321
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD------QGPPGPPGPPGPPGP 249
G+ G GL G GPPG++GEKGD+G + G KG+ GP GP GPPG PGP
Sbjct: 1322 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGP 1380
Query: 250 PGPPGSRRAKGPRQP 264
GP G++ A GP P
Sbjct: 1381 AGPKGAKGATGPGGP 1395
Score = 114 bits (285), Expect = 2e-25
Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ------------PGPQGPKGEKGANGKRGKMGIPGAA 186
GP GPPGPPG GLPGH G G+ PG GP+G G G G+ G PG
Sbjct: 803 GPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 862
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPP 244
G PGE+G G G+ G +G+ GPPG G+ G G + L G G G G GP
Sbjct: 863 GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 922
Query: 245 GPPGPPGPPGSRRAKGPRQP 264
GPPGP G PG R A G P
Sbjct: 923 GPPGPAGSPGERGAAGSGGP 942
Score = 113 bits (282), Expect = 5e-25
Identities = 65/158 (41%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G GP GA G G G G GP GP GE+G G +G G PG G PG G+ G
Sbjct: 757 TGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGL 816
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE+G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 817 PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGE----TGPMGERGHPGPPGPPGEQGLPG 872
Query: 252 PPGSRRAKG-PRQPSMFNGQCPGETCAIPNDDTLVGKA 288
G KG P P P P + L G A
Sbjct: 873 TAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTA 910
Score = 113 bits (282), Expect = 5e-25
Identities = 72/176 (40%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP GP G G G PG G G PGP GP+G+ GA G RG+ G PG G+PG GE
Sbjct: 1166 GPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGEN 1225
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G G LG +G G PG +G +G KG D GA G GP GP GP G PGP G G
Sbjct: 1226 GPPGPLGKRGPAGSPGSEGRQGGKG-AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGL 1284
Query: 256 RRAKGPRQPSMFNGQC-PGETCAIPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+ G + GQ P P L G A K + H +I IG P
Sbjct: 1285 PGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGH----PGLIGLIGPP 1336
Score = 111 bits (277), Expect = 2e-24
Identities = 62/159 (38%), Positives = 78/159 (49%), Gaps = 35/159 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---------NGKRGKMGIPGAAGNP 189
GP GPPGP G G PG G DG+PG +GP+G GA NG G +G+ G G
Sbjct: 1019 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPS 1078
Query: 190 GERGEKGDHGELGLQ------------------------GNEGPPGQKGEKGDKGD--VS 223
GE+GE GD G +G GN GPPG+KGE G+ G +
Sbjct: 1079 GEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1138
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
+ + G +G++G G G PG PGPPGP G GP+
Sbjct: 1139 GEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPK 1177
Score = 109 bits (273), Expect = 6e-24
Identities = 61/137 (44%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 137 LTGPSGPP------------GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPG 184
L GP+GPP G PG G G+ G G PGP GP G G G G G PG
Sbjct: 984 LPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG 1043
Query: 185 AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPP 244
A G G G KGD G G G GP G +G G G+ G GD GP GPPGPP
Sbjct: 1044 ARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE-------KGETGDVGPMGPPGPP 1096
Query: 245 GPPGPPGPPGSRRAKGP 261
GP GP GP G+ +GP
Sbjct: 1097 GPRGPAGPNGADGPQGP 1113
Score = 108 bits (271), Expect = 1e-23
Identities = 57/122 (46%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GP GPPG G PG G+DG GP+G G +G G G+ G PG G PG +G G H
Sbjct: 524 GLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPH 583
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE G QG G PG G G G + G KG+QGP GP GP G PGP G G
Sbjct: 584 GEKGPQGKPGLPGMPGSDGPPGHPGKEG-PPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 642
Query: 259 KG 260
+G
Sbjct: 643 RG 644
Score = 108 bits (270), Expect = 1e-23
Identities = 60/123 (48%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 138 TGPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
TGP+G PGPPG G G GL G PG QGPKG G G G G GA G G+ G
Sbjct: 691 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 750
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP---PGPPGPPG 251
+G+ G G +G GP G G+ G KG D G G++G PGP GP PGP GPPG
Sbjct: 751 RGERGPTGPRGQRGPRGATGKSGAKGTSGGDG-PHGPPGERGLPGPQGPNGFPGPKGPPG 809
Query: 252 PPG 254
PPG
Sbjct: 810 PPG 812
Score = 107 bits (268), Expect = 2e-23
Identities = 63/138 (45%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG---E 194
TG G PGPPG G G DG+ GP+G GE G G G G PG G PG RG
Sbjct: 490 TGAQGLPGPPGEDG---ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGP 546
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGDQGPPGPPG------PPGP 246
+G G LG QG GPPGQ+G G +G + G KG QG PG PG PPG
Sbjct: 547 QGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH 606
Query: 247 PGPPGPPGSRRAKGPRQP 264
PG GPPG++ +GP P
Sbjct: 607 PGKEGPPGTKGNQGPSGP 624
Score = 107 bits (267), Expect = 3e-23
Identities = 63/141 (44%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 139 GPSGPP---GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKR------GKMGIPGAAGNP 189
GP G P GPPG G G G G PG +G KG KG +G G +G PGAAG
Sbjct: 980 GPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGAD 1039
Query: 190 GERGEKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
GE G +G G G +G+E GPPG G +G G +G KG+ G GP GP
Sbjct: 1040 GEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGP-------SGEKGETGDVGPMGP 1092
Query: 244 PGPPGPPGPPGSRRAKGPRQP 264
PGPPGP GP G A GP+ P
Sbjct: 1093 PGPPGPRGPAGPNGADGPQGP 1113
Score = 105 bits (261), Expect = 1e-22
Identities = 64/147 (43%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE-- 194
+ G GPPG PG G PG G G GPQGP G G G +G GI G G+ GE+GE
Sbjct: 597 MPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDG 656
Query: 195 ----------KGDHGELGL---QGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
KGD GE+G+ +G +GP G KG G GD L+ G KG G PG P
Sbjct: 657 FPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM-GEKGKLGVPGLP 715
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 716 GYPGRQGPKGSLGFPGFPGASGEKGAR 742
Score = 101 bits (251), Expect = 2e-21
Identities = 61/148 (41%), Positives = 69/148 (46%), Gaps = 26/148 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PG PGA G G GL G+ GP+G +G G G+RG G G +G G G G H
Sbjct: 725 GSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPH 784
Query: 199 G---ELGLQGNEGPPGQKGEKGDKGDVSNDVL--------LAGAKGDQGPPGPPGPPGP- 246
G E GL G +GP G G KG G D L G +G GPPGPPG GP
Sbjct: 785 GPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQ 844
Query: 247 --------------PGPPGPPGSRRAKG 260
PGPPGPPG + G
Sbjct: 845 GAAGETGPMGERGHPGPPGPPGEQGLPG 872
Score = 100 bits (248), Expect = 5e-21
Identities = 56/144 (38%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
I + G G G PG+ G G G G+ GP G G G G++GK+G+PG G PG +G
Sbjct: 664 IGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGP 723
Query: 195 K------------GDHGELGLQGNEGPPGQKGEKGDKGD--VSNDVLLAGAKGDQGPPGP 240
K G+ G GL G GP G++G G +G +GAKG G GP
Sbjct: 724 KGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGP 783
Query: 241 PGPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G GP+ P
Sbjct: 784 HGPPGERGLPGPQGPNGFPGPKGP 807
Score = 97.4 bits (241), Expect = 3e-20
Identities = 59/134 (44%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG G GL G G G PGP G +G G G +G +G G G PG++G G
Sbjct: 512 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 571
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG---PP------GPPGP 249
G G QG GP G+KG +G G L G G GPPG PG PP GP GP
Sbjct: 572 GLPGPQGAIGPHGEKGPQGKPG-------LPGMPGSDGPPGHPGKEGPPGTKGNQGPSGP 624
Query: 250 PGP---PGSRRAKG 260
GP PG R KG
Sbjct: 625 QGPLGYPGPRGVKG 638
Score = 89.7 bits (221), Expect = 6e-18
Identities = 56/144 (38%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER--------- 192
GPPGP G GL G G+ G PGP G GE+G G+ G G GA G PG
Sbjct: 313 GPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGS 372
Query: 193 --GEKG--------------DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G+KG L L+G GP G G G G + L G GD G
Sbjct: 373 GGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPG-LKGESGDLG 431
Query: 237 PPGPPGPPGPPGPPGPPGSRRAKG 260
P GP GP G GPPG G R G
Sbjct: 432 PQGPRGPQGLTGPPGKAGRRGRAG 455
Score = 81.3 bits (199), Expect = 2e-15
Identities = 77/255 (30%), Positives = 106/255 (41%), Gaps = 60/255 (23%)
Query: 49 RALEAQRGREQREDSALRSFLAELSRAPRGASAPPQDPASSAR--NKRSHSGEPAPHIRA 106
+ LE + G+ +R + + R +P Q P+ R N+ S +P P
Sbjct: 224 KELECEGGQRERPQN---------QQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEE 274
Query: 107 ESHDMLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQG 166
E ++ S++P + + + +G L G G P G L ++G PGP+G
Sbjct: 275 E------ILESSLLP--PLEEAAHGPRG--LKGEKGEPAVLEPGML-----VEGPPGPEG 319
Query: 167 PKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK---------- 216
P G G G +G PG G+PGERG G GL G++G PG G
Sbjct: 320 PAGLIGPPGIQGN---PGPVGDPGERGPPG---RAGLPGSDGAPGPPGTSLMLPFRFGSG 373
Query: 217 -GDKGDV-------SNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAK--------- 259
GDKG V + +L +GPPGP G G PGP G PGS K
Sbjct: 374 GGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQ 433
Query: 260 GPRQPSMFNGQCPGE 274
GPR P G PG+
Sbjct: 434 GPRGPQGLTGP-PGK 447
Score = 74.3 bits (181), Expect = 3e-13
Identities = 51/116 (43%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G GPPG G G G PGPQG G+K G+MGIPGA+G G G
Sbjct: 1329 LIGLIGPPGE------QGEKGDRGLPGPQGSPGQK------GEMGIPGASGPIGPGGPP- 1375
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GL G GP G KG G G G KG QGPPG PGPPG P P
Sbjct: 1376 -----GLPGPAGPKGAKGATGPGGP-------KGEKGVQGPPGHPGPPGEVIQPLP 1419
Score = 60.8 bits (146), Expect = 3e-09
Identities = 59/202 (29%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP-----GER 192
+GP GP GPPG G G G G GP GPKGEKG G G G PG P ++
Sbjct: 1366 SGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKK 1425
Query: 193 GEKGDHGELGLQGNEGPP--GQKGEKGDKGDV--SNDVLLAGAKGDQGPPGPPGPPG--- 245
+ G +Q +E P G G G ++ S D L + + P G P
Sbjct: 1426 TRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQDSPARTC 1485
Query: 246 -------PPGPPGPPGSRRAKGPRQPS---MFNGQCPGETCAIPNDDTLVGKADEKASEH 295
P P G +G + + N GETC P DD
Sbjct: 1486 QDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDV------------ 1533
Query: 296 HSPQAESMITSIGNPVQVLKVT 317
S + S G+PV V+++T
Sbjct: 1534 ---TQFSYVDSEGSPVGVVQLT 1552
Score = 56.2 bits (134), Expect = 7e-08
Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGL---DGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
L GP G PG G G+PG +G G PG GP G KGA G G PG G
Sbjct: 1347 LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATG----PG--------G 1394
Query: 194 EKGDHGELGLQGNEGPPGQ-------KGEKGDKGDVSNDVLLAGAKGDQGPP--GPPGPP 244
KG+ G G G+ GPPG+ + K + V L+ + D+ P G PG P
Sbjct: 1395 PKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLM---QEDEAIPTGGAPGSP 1451
Query: 245 G 245
G
Sbjct: 1452 G 1452
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 124 bits (310), Expect = 3e-28
Identities = 71/145 (48%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ------GPKGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP GP GEKG G+ G GI G G G R
Sbjct: 1067 GPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPR 1126
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GE+G+ GE G G GPPG KG GD G KG+ GP G PG PGPPG GP
Sbjct: 1127 GERGEKGESGQPGEPGPPGPKGPTGDD----------GPKGNPGPVGFPGDPGPPGEGGP 1176
Query: 253 PGSRRAKGPRQPSMFNGQ--CPGET 275
G AKG R GQ PG T
Sbjct: 1177 RGQDGAKGDRGEDGEPGQPGSPGPT 1201
Score = 120 bits (302), Expect = 2e-27
Identities = 62/122 (50%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GPSGPPGP G+ G G G G GP G G +G G G+ G+PG G G G G
Sbjct: 899 GPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQ 958
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G +GL G GPPG GE GDKG+V D G KG++G GPPGPPGP GP G PG+ A
Sbjct: 959 GPVGLPGPAGPPGVAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGA 1017
Query: 259 KG 260
G
Sbjct: 1018 DG 1019
Score = 119 bits (298), Expect = 7e-27
Identities = 80/213 (37%), Positives = 97/213 (45%), Gaps = 42/213 (19%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGAN------GKRGKMGI 182
+ L GP GP PGP G G PG G G GPQGP+G +G G+RG+ G
Sbjct: 376 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGA 435
Query: 183 PGAAGNPGE---------------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
GA G PG+ GEKG G+ G QG GPPG+ GE+GD G++
Sbjct: 436 DGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP--- 492
Query: 228 LAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ-----CPGE-----TCA 277
G G+ GP G GP GPPG PGPPG R GP+ P G PG+ T
Sbjct: 493 -RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQG 551
Query: 278 IPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+P +G EK + P M S G P
Sbjct: 552 LPGPQGAIGPHGEKGPQ-GKPGLPGMPGSDGPP 583
Score = 119 bits (297), Expect = 9e-27
Identities = 61/132 (46%), Positives = 73/132 (55%), Gaps = 19/132 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---------PGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G +GPPGP G GLPG +G G+ PGP GP+G G NG G G PG GN
Sbjct: 1040 GFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL 1099
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
G GEKG+ GE G G +G PG KG +G++G+ KG+ G PG PGPPGP GP
Sbjct: 1100 GPPGEKGEPGESGSPGIQGEPGVKGPRGERGE----------KGESGQPGEPGPPGPKGP 1149
Query: 250 PGPPGSRRAKGP 261
G G + GP
Sbjct: 1150 TGDDGPKGNPGP 1161
Score = 115 bits (288), Expect = 1e-25
Identities = 61/127 (48%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD 197
TGP G G PG G PG GL G G +G KG+ G G GK G G G PGERG G
Sbjct: 829 TGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 888
Query: 198 HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRR 257
G GL+GNEGP G G G G+ GA G GP GPPG PGP GPPG G +
Sbjct: 889 AGGPGLKGNEGPSGPPGPAGSPGE-------RGAAGSGGPIGPPGRPGPQGPPGAAGEKG 941
Query: 258 AKGPRQP 264
G + P
Sbjct: 942 VPGEKGP 948
Score = 115 bits (288), Expect = 1e-25
Identities = 61/126 (48%), Positives = 70/126 (55%), Gaps = 19/126 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG +GP G G +G +G +G+PG AG PG GE GD
Sbjct: 920 GPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK 979
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+ G PGQKG KG+ KG+ GPPGPPGP GP G PG G+
Sbjct: 980 GEV------GDPGQKGTKGN-------------KGEHGPPGPPGPIGPVGQPGAAGADGE 1020
Query: 259 KGPRQP 264
G R P
Sbjct: 1021 PGARGP 1026
Score = 114 bits (286), Expect = 2e-25
Identities = 65/154 (42%), Positives = 76/154 (49%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G G GP GEKG GK G G+PG+ G PG G++G
Sbjct: 533 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPP 592
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
G G QG GP G KGEKG+ KGD+ +V
Sbjct: 593 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 652
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
+ G++G+ GP GP G GP G PGPPG KG
Sbjct: 653 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKG 686
Score = 114 bits (286), Expect = 2e-25
Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ GP G G PG G PG G G GP+G +GEKG +G+ G+ G PG G G+ G
Sbjct: 1095 GVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG 1154
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
KG+ G +G G+ GPPG+ G +G G G +G+ G PG PG PGP G GPP
Sbjct: 1155 PKGNPGPVGFPGDPGPPGEGGPRGQDG-------AKGDRGEDGEPGQPGSPGPTGENGPP 1207
Query: 254 GSRRAKGP 261
G +GP
Sbjct: 1208 GPLGKRGP 1215
Score = 114 bits (286), Expect = 2e-25
Identities = 64/135 (47%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE---K 195
G +GP GP G G PG +GL G PG G +G GA G+ G G G G PG RG+ K
Sbjct: 1241 GKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1300
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD------QGPPGPPGPPGPPGP 249
G+ G GL G GPPG++GEKGD+G + G KG+ GP GP GPPG PGP
Sbjct: 1301 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGP 1359
Query: 250 PGPPGSRRAKGPRQP 264
GP G++ A GP P
Sbjct: 1360 AGPKGAKGATGPGGP 1374
Score = 114 bits (285), Expect = 2e-25
Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ------------PGPQGPKGEKGANGKRGKMGIPGAA 186
GP GPPGPPG GLPGH G G+ PG GP+G G G G+ G PG
Sbjct: 782 GPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 841
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPP 244
G PGE+G G G+ G +G+ GPPG G+ G G + L G G G G GP
Sbjct: 842 GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 901
Query: 245 GPPGPPGPPGSRRAKGPRQP 264
GPPGP G PG R A G P
Sbjct: 902 GPPGPAGSPGERGAAGSGGP 921
Score = 113 bits (282), Expect = 5e-25
Identities = 65/158 (41%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G GP GA G G G G GP GP GE+G G +G G PG G PG G+ G
Sbjct: 736 TGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGL 795
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE+G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 796 PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGE----TGPMGERGHPGPPGPPGEQGLPG 851
Query: 252 PPGSRRAKG-PRQPSMFNGQCPGETCAIPNDDTLVGKA 288
G KG P P P P + L G A
Sbjct: 852 TAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTA 889
Score = 113 bits (282), Expect = 5e-25
Identities = 72/176 (40%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP GP G G G PG G G PGP GP+G+ GA G RG+ G PG G+PG GE
Sbjct: 1145 GPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGEN 1204
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G G LG +G G PG +G +G KG D GA G GP GP GP G PGP G G
Sbjct: 1205 GPPGPLGKRGPAGSPGSEGRQGGKG-AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGL 1263
Query: 256 RRAKGPRQPSMFNGQC-PGETCAIPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+ G + GQ P P L G A K + H +I IG P
Sbjct: 1264 PGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGH----PGLIGLIGPP 1315
Score = 111 bits (277), Expect = 2e-24
Identities = 62/159 (38%), Positives = 78/159 (49%), Gaps = 35/159 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---------NGKRGKMGIPGAAGNP 189
GP GPPGP G G PG G DG+PG +GP+G GA NG G +G+ G G
Sbjct: 998 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPS 1057
Query: 190 GERGEKGDHGELGLQ------------------------GNEGPPGQKGEKGDKGD--VS 223
GE+GE GD G +G GN GPPG+KGE G+ G +
Sbjct: 1058 GEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1117
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
+ + G +G++G G G PG PGPPGP G GP+
Sbjct: 1118 GEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPK 1156
Score = 109 bits (273), Expect = 6e-24
Identities = 61/137 (44%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 137 LTGPSGPP------------GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPG 184
L GP+GPP G PG G G+ G G PGP GP G G G G G PG
Sbjct: 963 LPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG 1022
Query: 185 AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPP 244
A G G G KGD G G G GP G +G G G+ G GD GP GPPGPP
Sbjct: 1023 ARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE-------KGETGDVGPMGPPGPP 1075
Query: 245 GPPGPPGPPGSRRAKGP 261
GP GP GP G+ +GP
Sbjct: 1076 GPRGPAGPNGADGPQGP 1092
Score = 108 bits (271), Expect = 1e-23
Identities = 57/122 (46%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GP GPPG G PG G+DG GP+G G +G G G+ G PG G PG +G G H
Sbjct: 503 GLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPH 562
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE G QG G PG G G G + G KG+QGP GP GP G PGP G G
Sbjct: 563 GEKGPQGKPGLPGMPGSDGPPGHPGKEG-PPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 621
Query: 259 KG 260
+G
Sbjct: 622 RG 623
Score = 108 bits (270), Expect = 1e-23
Identities = 60/123 (48%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 138 TGPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
TGP+G PGPPG G G GL G PG QGPKG G G G G GA G G+ G
Sbjct: 670 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 729
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP---PGPPGPPG 251
+G+ G G +G GP G G+ G KG D G G++G PGP GP PGP GPPG
Sbjct: 730 RGERGPTGPRGQRGPRGATGKSGAKGTSGGDG-PHGPPGERGLPGPQGPNGFPGPKGPPG 788
Query: 252 PPG 254
PPG
Sbjct: 789 PPG 791
Score = 107 bits (268), Expect = 2e-23
Identities = 63/138 (45%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG---E 194
TG G PGPPG G G DG+ GP+G GE G G G G PG G PG RG
Sbjct: 469 TGAQGLPGPPGEDG---ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGP 525
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGDQGPPGPPG------PPGP 246
+G G LG QG GPPGQ+G G +G + G KG QG PG PG PPG
Sbjct: 526 QGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH 585
Query: 247 PGPPGPPGSRRAKGPRQP 264
PG GPPG++ +GP P
Sbjct: 586 PGKEGPPGTKGNQGPSGP 603
Score = 107 bits (267), Expect = 3e-23
Identities = 63/141 (44%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 139 GPSGPP---GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKR------GKMGIPGAAGNP 189
GP G P GPPG G G G G PG +G KG KG +G G +G PGAAG
Sbjct: 959 GPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGAD 1018
Query: 190 GERGEKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
GE G +G G G +G+E GPPG G +G G +G KG+ G GP GP
Sbjct: 1019 GEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGP-------SGEKGETGDVGPMGP 1071
Query: 244 PGPPGPPGPPGSRRAKGPRQP 264
PGPPGP GP G A GP+ P
Sbjct: 1072 PGPPGPRGPAGPNGADGPQGP 1092
Score = 105 bits (261), Expect = 1e-22
Identities = 64/147 (43%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE-- 194
+ G GPPG PG G PG G G GPQGP G G G +G GI G G+ GE+GE
Sbjct: 576 MPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDG 635
Query: 195 ----------KGDHGELGL---QGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
KGD GE+G+ +G +GP G KG G GD L+ G KG G PG P
Sbjct: 636 FPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM-GEKGKLGVPGLP 694
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 695 GYPGRQGPKGSLGFPGFPGASGEKGAR 721
Score = 101 bits (251), Expect = 2e-21
Identities = 61/148 (41%), Positives = 69/148 (46%), Gaps = 26/148 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PG PGA G G GL G+ GP+G +G G G+RG G G +G G G G H
Sbjct: 704 GSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPH 763
Query: 199 G---ELGLQGNEGPPGQKGEKGDKGDVSNDVL--------LAGAKGDQGPPGPPGPPGP- 246
G E GL G +GP G G KG G D L G +G GPPGPPG GP
Sbjct: 764 GPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQ 823
Query: 247 --------------PGPPGPPGSRRAKG 260
PGPPGPPG + G
Sbjct: 824 GAAGETGPMGERGHPGPPGPPGEQGLPG 851
Score = 100 bits (248), Expect = 5e-21
Identities = 56/144 (38%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
I + G G G PG+ G G G G+ GP G G G G++GK+G+PG G PG +G
Sbjct: 643 IGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGP 702
Query: 195 K------------GDHGELGLQGNEGPPGQKGEKGDKGD--VSNDVLLAGAKGDQGPPGP 240
K G+ G GL G GP G++G G +G +GAKG G GP
Sbjct: 703 KGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGP 762
Query: 241 PGPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G GP+ P
Sbjct: 763 HGPPGERGLPGPQGPNGFPGPKGP 786
Score = 97.4 bits (241), Expect = 3e-20
Identities = 59/134 (44%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG G GL G G G PGP G +G G G +G +G G G PG++G G
Sbjct: 491 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 550
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG---PP------GPPGP 249
G G QG GP G+KG +G G L G G GPPG PG PP GP GP
Sbjct: 551 GLPGPQGAIGPHGEKGPQGKPG-------LPGMPGSDGPPGHPGKEGPPGTKGNQGPSGP 603
Query: 250 PGP---PGSRRAKG 260
GP PG R KG
Sbjct: 604 QGPLGYPGPRGVKG 617
Score = 90.5 bits (223), Expect = 4e-18
Identities = 73/235 (31%), Positives = 92/235 (39%), Gaps = 58/235 (24%)
Query: 52 EAQRGREQREDSALRSFLAELSRAPRGASAPPQDPASSA-RNKRSHSGEPAPHIRAESHD 110
+ +R + Q+ A RS + SR R + PQ A+ R + GEPA
Sbjct: 232 QRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPA--------- 282
Query: 111 MLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE 170
++ ++V+ GPPGP G GL G G+ G PGP G GE
Sbjct: 283 --------VLEPGMLVE--------------GPPGPEGPAGLIGPPGIQGNPGPVGDPGE 320
Query: 171 KGANGKRGKMGIPGAAGNPGER-----------GEKG--------------DHGELGLQG 205
+G G+ G G GA G PG G+KG L L+G
Sbjct: 321 RGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRG 380
Query: 206 NEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
GP G G G G + L G GD GP GP GP G GPPG G R G
Sbjct: 381 PPGPMGYTGRPGPLGQPGSPG-LKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAG 434
Score = 77.0 bits (188), Expect = 4e-14
Identities = 60/168 (35%), Positives = 69/168 (41%), Gaps = 41/168 (24%)
Query: 144 PGPPGAGGLPGHNGLDGQP----------GPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
P A G G G G+P GP GP+G G G G G PG G+PGERG
Sbjct: 263 PQSQAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERG 322
Query: 194 EKGDHGELGLQGNEGPPGQKGEK-----------GDKGDV-------SNDVLLAGAKGDQ 235
G GL G++G PG G GDKG V + +L +
Sbjct: 323 PPG---RAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALR 379
Query: 236 GPPGPPGPPGPPGPPGPPGSRRAK---------GPRQPSMFNGQCPGE 274
GPPGP G G PGP G PGS K GPR P G PG+
Sbjct: 380 GPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP-PGK 426
Score = 74.3 bits (181), Expect = 3e-13
Identities = 51/116 (43%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G GPPG G G G PGPQG G+K G+MGIPGA+G G G
Sbjct: 1308 LIGLIGPPGE------QGEKGDRGLPGPQGSPGQK------GEMGIPGASGPIGPGGPP- 1354
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GL G GP G KG G G G KG QGPPG PGPPG P P
Sbjct: 1355 -----GLPGPAGPKGAKGATGPGGP-------KGEKGVQGPPGHPGPPGEVIQPLP 1398
Score = 60.8 bits (146), Expect = 3e-09
Identities = 59/202 (29%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP-----GER 192
+GP GP GPPG G G G G GP GPKGEKG G G G PG P ++
Sbjct: 1345 SGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKK 1404
Query: 193 GEKGDHGELGLQGNEGPP--GQKGEKGDKGDV--SNDVLLAGAKGDQGPPGPPGPPG--- 245
+ G +Q +E P G G G ++ S D L + + P G P
Sbjct: 1405 TRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQDSPARTC 1464
Query: 246 -------PPGPPGPPGSRRAKGPRQPS---MFNGQCPGETCAIPNDDTLVGKADEKASEH 295
P P G +G + + N GETC P DD
Sbjct: 1465 QDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDV------------ 1512
Query: 296 HSPQAESMITSIGNPVQVLKVT 317
S + S G+PV V+++T
Sbjct: 1513 ---TQFSYVDSEGSPVGVVQLT 1531
Score = 56.2 bits (134), Expect = 7e-08
Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGL---DGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
L GP G PG G G+PG +G G PG GP G KGA G G PG G
Sbjct: 1326 LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATG----PG--------G 1373
Query: 194 EKGDHGELGLQGNEGPPGQ-------KGEKGDKGDVSNDVLLAGAKGDQGPP--GPPGPP 244
KG+ G G G+ GPPG+ + K + V L+ + D+ P G PG P
Sbjct: 1374 PKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLM---QEDEAIPTGGAPGSP 1430
Query: 245 G 245
G
Sbjct: 1431 G 1431
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 124 bits (310), Expect = 3e-28
Identities = 71/145 (48%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ------GPKGEKGANGKRGKMGIPGAAGNPGER 192
GP GPPGPPG G G NG DG GP GP GEKG G+ G GI G G G R
Sbjct: 1174 GPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPR 1233
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GE+G+ GE G G GPPG KG GD G KG+ GP G PG PGPPG GP
Sbjct: 1234 GERGEKGESGQPGEPGPPGPKGPTGDD----------GPKGNPGPVGFPGDPGPPGEGGP 1283
Query: 253 PGSRRAKGPRQPSMFNGQ--CPGET 275
G AKG R GQ PG T
Sbjct: 1284 RGQDGAKGDRGEDGEPGQPGSPGPT 1308
Score = 120 bits (302), Expect = 2e-27
Identities = 63/127 (49%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE---KGANGKRGKMGIPGAAGNPGERG 193
L G GP GPPG G PG G G GP GP G +G G G+ G+PG G G G
Sbjct: 1001 LKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTG 1060
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
G G +GL G GPPG GE GDKG+V D G KG++G GPPGPPGP GP G P
Sbjct: 1061 RDGVQGPVGLPGPAGPPGVAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQP 1119
Query: 254 GSRRAKG 260
G+ A G
Sbjct: 1120 GAAGADG 1126
Score = 119 bits (298), Expect = 7e-27
Identities = 80/213 (37%), Positives = 97/213 (45%), Gaps = 42/213 (19%)
Query: 135 ICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGAN------GKRGKMGI 182
+ L GP GP PGP G G PG G G GPQGP+G +G G+RG+ G
Sbjct: 483 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGA 542
Query: 183 PGAAGNPGE---------------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
GA G PG+ GEKG G+ G QG GPPG+ GE+GD G++
Sbjct: 543 DGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP--- 599
Query: 228 LAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ-----CPGE-----TCA 277
G G+ GP G GP GPPG PGPPG R GP+ P G PG+ T
Sbjct: 600 -RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQG 658
Query: 278 IPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+P +G EK + P M S G P
Sbjct: 659 LPGPQGAIGPHGEKGPQ-GKPGLPGMPGSDGPP 690
Score = 119 bits (297), Expect = 9e-27
Identities = 61/132 (46%), Positives = 73/132 (55%), Gaps = 19/132 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---------PGPQGPKGEKGANGKRGKMGIPGAAGNP 189
G +GPPGP G GLPG +G G+ PGP GP+G G NG G G PG GN
Sbjct: 1147 GFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL 1206
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGP 249
G GEKG+ GE G G +G PG KG +G++G+ KG+ G PG PGPPGP GP
Sbjct: 1207 GPPGEKGEPGESGSPGIQGEPGVKGPRGERGE----------KGESGQPGEPGPPGPKGP 1256
Query: 250 PGPPGSRRAKGP 261
G G + GP
Sbjct: 1257 TGDDGPKGNPGP 1268
Score = 115 bits (288), Expect = 1e-25
Identities = 61/127 (48%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD 197
TGP G G PG G PG GL G G +G KG+ G G GK G G G PGERG G
Sbjct: 936 TGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 995
Query: 198 HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRR 257
G GL+GNEGP G G G G+ GA G GP GPPG PGP GPPG G +
Sbjct: 996 AGGPGLKGNEGPSGPPGPAGSPGE-------RGAAGSGGPIGPPGRPGPQGPPGAAGEKG 1048
Query: 258 AKGPRQP 264
G + P
Sbjct: 1049 VPGEKGP 1055
Score = 115 bits (288), Expect = 1e-25
Identities = 61/126 (48%), Positives = 70/126 (55%), Gaps = 19/126 (15%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GPPG PG G PG G G PG +GP G G +G +G +G+PG AG PG GE GD
Sbjct: 1027 GPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK 1086
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE+ G PGQKG KG+ KG+ GPPGPPGP GP G PG G+
Sbjct: 1087 GEV------GDPGQKGTKGN-------------KGEHGPPGPPGPIGPVGQPGAAGADGE 1127
Query: 259 KGPRQP 264
G R P
Sbjct: 1128 PGARGP 1133
Score = 114 bits (286), Expect = 2e-25
Identities = 65/154 (42%), Positives = 76/154 (49%), Gaps = 32/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGPPG G PG GL G G GP GEKG GK G G+PG+ G PG G++G
Sbjct: 640 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPP 699
Query: 199 GELGLQGNEGP---------------------PGQKGEKGD------KGDVS-----NDV 226
G G QG GP G KGEKG+ KGD+ +V
Sbjct: 700 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 759
Query: 227 LLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
+ G++G+ GP GP G GP G PGPPG KG
Sbjct: 760 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKG 793
Score = 114 bits (286), Expect = 2e-25
Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G+ GP G G PG G PG G G GP+G +GEKG +G+ G+ G PG G G+ G
Sbjct: 1202 GVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG 1261
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
KG+ G +G G+ GPPG+ G +G G G +G+ G PG PG PGP G GPP
Sbjct: 1262 PKGNPGPVGFPGDPGPPGEGGPRGQDG-------AKGDRGEDGEPGQPGSPGPTGENGPP 1314
Query: 254 GSRRAKGP 261
G +GP
Sbjct: 1315 GPLGKRGP 1322
Score = 114 bits (286), Expect = 2e-25
Identities = 64/135 (47%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE---K 195
G +GP GP G G PG +GL G PG G +G GA G+ G G G G PG RG+ K
Sbjct: 1348 GKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1407
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD------QGPPGPPGPPGPPGP 249
G+ G GL G GPPG++GEKGD+G + G KG+ GP GP GPPG PGP
Sbjct: 1408 GEKGHPGLIGLIGPPGEQGEKGDRG-LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGP 1466
Query: 250 PGPPGSRRAKGPRQP 264
GP G++ A GP P
Sbjct: 1467 AGPKGAKGATGPGGP 1481
Score = 114 bits (285), Expect = 2e-25
Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ------------PGPQGPKGEKGANGKRGKMGIPGAA 186
GP GPPGPPG GLPGH G G+ PG GP+G G G G+ G PG
Sbjct: 889 GPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 948
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKG--DVSNDVLLAGAKGDQGPPGPPGPP 244
G PGE+G G G+ G +G+ GPPG G+ G G + L G G G G GP
Sbjct: 949 GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 1008
Query: 245 GPPGPPGPPGSRRAKGPRQP 264
GPPGP G PG R A G P
Sbjct: 1009 GPPGPAGSPGERGAAGSGGP 1028
Score = 113 bits (282), Expect = 5e-25
Identities = 65/158 (41%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG- 196
TGP G GP GA G G G G GP GP GE+G G +G G PG G PG G+ G
Sbjct: 843 TGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGL 902
Query: 197 -----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
GE+G QG GPPG G G +G G G++G PGPPGPPG G PG
Sbjct: 903 PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGE----TGPMGERGHPGPPGPPGEQGLPG 958
Query: 252 PPGSRRAKG-PRQPSMFNGQCPGETCAIPNDDTLVGKA 288
G KG P P P P + L G A
Sbjct: 959 TAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTA 996
Score = 113 bits (282), Expect = 5e-25
Identities = 72/176 (40%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ---GPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
GP GP G G G PG G G PGP GP+G+ GA G RG+ G PG G+PG GE
Sbjct: 1252 GPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGEN 1311
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G G LG +G G PG +G +G KG D GA G GP GP GP G PGP G G
Sbjct: 1312 GPPGPLGKRGPAGSPGSEGRQGGKG-AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGL 1370
Query: 256 RRAKGPRQPSMFNGQC-PGETCAIPNDDTLVGKADEKASEHHSPQAESMITSIGNP 310
+ G + GQ P P L G A K + H +I IG P
Sbjct: 1371 PGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGH----PGLIGLIGPP 1422
Score = 111 bits (277), Expect = 2e-24
Identities = 62/159 (38%), Positives = 78/159 (49%), Gaps = 35/159 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA---------NGKRGKMGIPGAAGNP 189
GP GPPGP G G PG G DG+PG +GP+G GA NG G +G+ G G
Sbjct: 1105 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPS 1164
Query: 190 GERGEKGDHGELGLQ------------------------GNEGPPGQKGEKGDKGD--VS 223
GE+GE GD G +G GN GPPG+KGE G+ G +
Sbjct: 1165 GEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQ 1224
Query: 224 NDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
+ + G +G++G G G PG PGPPGP G GP+
Sbjct: 1225 GEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPK 1263
Score = 109 bits (273), Expect = 6e-24
Identities = 61/137 (44%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 137 LTGPSGPP------------GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPG 184
L GP+GPP G PG G G+ G G PGP GP G G G G G PG
Sbjct: 1070 LPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG 1129
Query: 185 AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPP 244
A G G G KGD G G G GP G +G G G+ G GD GP GPPGPP
Sbjct: 1130 ARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE-------KGETGDVGPMGPPGPP 1182
Query: 245 GPPGPPGPPGSRRAKGP 261
GP GP GP G+ +GP
Sbjct: 1183 GPRGPAGPNGADGPQGP 1199
Score = 108 bits (271), Expect = 1e-23
Identities = 57/122 (46%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GP GPPG G PG G+DG GP+G G +G G G+ G PG G PG +G G H
Sbjct: 610 GLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPH 669
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
GE G QG G PG G G G + G KG+QGP GP GP G PGP G G
Sbjct: 670 GEKGPQGKPGLPGMPGSDGPPGHPGKEG-PPGTKGNQGPSGPQGPLGYPGPRGVKGVDGI 728
Query: 259 KG 260
+G
Sbjct: 729 RG 730
Score = 108 bits (270), Expect = 1e-23
Identities = 60/123 (48%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 138 TGPSGPPGPPGAGGLPGH---NGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
TGP+G PGPPG G G GL G PG QGPKG G G G G GA G G+ G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP---PGPPGPPG 251
+G+ G G +G GP G G+ G KG D G G++G PGP GP PGP GPPG
Sbjct: 837 RGERGPTGPRGQRGPRGATGKSGAKGTSGGDG-PHGPPGERGLPGPQGPNGFPGPKGPPG 895
Query: 252 PPG 254
PPG
Sbjct: 896 PPG 898
Score = 107 bits (268), Expect = 2e-23
Identities = 63/138 (45%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG---E 194
TG G PGPPG G G DG+ GP+G GE G G G G PG G PG RG
Sbjct: 576 TGAQGLPGPPGEDG---ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGP 632
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA--GAKGDQGPPGPPG------PPGP 246
+G G LG QG GPPGQ+G G +G + G KG QG PG PG PPG
Sbjct: 633 QGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH 692
Query: 247 PGPPGPPGSRRAKGPRQP 264
PG GPPG++ +GP P
Sbjct: 693 PGKEGPPGTKGNQGPSGP 710
Score = 107 bits (267), Expect = 3e-23
Identities = 63/141 (44%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 139 GPSGPP---GPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKR------GKMGIPGAAGNP 189
GP G P GPPG G G G G PG +G KG KG +G G +G PGAAG
Sbjct: 1066 GPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGAD 1125
Query: 190 GERGEKGDHGELGLQGNE------GPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP 243
GE G +G G G +G+E GPPG G +G G +G KG+ G GP GP
Sbjct: 1126 GEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGP-------SGEKGETGDVGPMGP 1178
Query: 244 PGPPGPPGPPGSRRAKGPRQP 264
PGPPGP GP G A GP+ P
Sbjct: 1179 PGPPGPRGPAGPNGADGPQGP 1199
Score = 105 bits (261), Expect = 1e-22
Identities = 64/147 (43%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE-- 194
+ G GPPG PG G PG G G GPQGP G G G +G GI G G+ GE+GE
Sbjct: 683 MPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDG 742
Query: 195 ----------KGDHGELGL---QGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
KGD GE+G+ +G +GP G KG G GD L+ G KG G PG P
Sbjct: 743 FPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM-GEKGKLGVPGLP 801
Query: 242 GPPGPPGP------PGPPGSRRAKGPR 262
G PG GP PG PG+ KG R
Sbjct: 802 GYPGRQGPKGSLGFPGFPGASGEKGAR 828
Score = 101 bits (251), Expect = 2e-21
Identities = 61/148 (41%), Positives = 69/148 (46%), Gaps = 26/148 (17%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PG PGA G G GL G+ GP+G +G G G+RG G G +G G G G H
Sbjct: 811 GSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPH 870
Query: 199 G---ELGLQGNEGPPGQKGEKGDKGDVSNDVL--------LAGAKGDQGPPGPPGPPGP- 246
G E GL G +GP G G KG G D L G +G GPPGPPG GP
Sbjct: 871 GPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQ 930
Query: 247 --------------PGPPGPPGSRRAKG 260
PGPPGPPG + G
Sbjct: 931 GAAGETGPMGERGHPGPPGPPGEQGLPG 958
Score = 100 bits (248), Expect = 5e-21
Identities = 56/144 (38%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
I + G G G PG+ G G G G+ GP G G G G++GK+G+PG G PG +G
Sbjct: 750 IGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGP 809
Query: 195 K------------GDHGELGLQGNEGPPGQKGEKGDKGD--VSNDVLLAGAKGDQGPPGP 240
K G+ G GL G GP G++G G +G +GAKG G GP
Sbjct: 810 KGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGP 869
Query: 241 PGPPGPPGPPGPPGSRRAKGPRQP 264
GPPG G PGP G GP+ P
Sbjct: 870 HGPPGERGLPGPQGPNGFPGPKGP 893
Score = 97.4 bits (241), Expect = 3e-20
Identities = 59/134 (44%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PG G GL G G G PGP G +G G G +G +G G G PG++G G
Sbjct: 598 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 657
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG---PP------GPPGP 249
G G QG GP G+KG +G G L G G GPPG PG PP GP GP
Sbjct: 658 GLPGPQGAIGPHGEKGPQGKPG-------LPGMPGSDGPPGHPGKEGPPGTKGNQGPSGP 710
Query: 250 PGP---PGSRRAKG 260
GP PG R KG
Sbjct: 711 QGPLGYPGPRGVKG 724
Score = 89.7 bits (221), Expect = 6e-18
Identities = 56/144 (38%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER--------- 192
GPPGP G GL G G+ G PGP G GE+G G+ G G GA G PG
Sbjct: 399 GPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGS 458
Query: 193 --GEKG--------------DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G+KG L L+G GP G G G G + L G GD G
Sbjct: 459 GGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPG-LKGESGDLG 517
Query: 237 PPGPPGPPGPPGPPGPPGSRRAKG 260
P GP GP G GPPG G R G
Sbjct: 518 PQGPRGPQGLTGPPGKAGRRGRAG 541
Score = 77.8 bits (190), Expect = 2e-14
Identities = 62/170 (36%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 134 GICLTGPSGPPGPPGAGGL--PGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
G GP G G G + PG ++G PGP+GP G G G +G PG G+PGE
Sbjct: 372 GAAAHGPRGLKGEKGEPAVLEPGML-VEGPPGPEGPAGLIGPPGIQGN---PGPVGDPGE 427
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEK-----------GDKGDV-------SNDVLLAGAKG 233
RG G GL G++G PG G GDKG V + +L
Sbjct: 428 RGPPG---RAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLA 484
Query: 234 DQGPPGPPGPPGPPGPPGPPGSRRAK---------GPRQPSMFNGQCPGE 274
+GPPGP G G PGP G PGS K GPR P G PG+
Sbjct: 485 LRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP-PGK 533
Score = 74.3 bits (181), Expect = 3e-13
Identities = 51/116 (43%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G GPPG G G G PGPQG G+K G+MGIPGA+G G G
Sbjct: 1415 LIGLIGPPGE------QGEKGDRGLPGPQGSPGQK------GEMGIPGASGPIGPGGPP- 1461
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GL G GP G KG G G G KG QGPPG PGPPG P P
Sbjct: 1462 -----GLPGPAGPKGAKGATGPGGP-------KGEKGVQGPPGHPGPPGEVIQPLP 1505
Score = 60.8 bits (146), Expect = 3e-09
Identities = 59/202 (29%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP-----GER 192
+GP GP GPPG G G G G GP GPKGEKG G G G PG P ++
Sbjct: 1452 SGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKK 1511
Query: 193 GEKGDHGELGLQGNEGPP--GQKGEKGDKGDV--SNDVLLAGAKGDQGPPGPPGPPG--- 245
+ G +Q +E P G G G ++ S D L + + P G P
Sbjct: 1512 TRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQDSPARTC 1571
Query: 246 -------PPGPPGPPGSRRAKGPRQPS---MFNGQCPGETCAIPNDDTLVGKADEKASEH 295
P P G +G + + N GETC P DD
Sbjct: 1572 QDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDV------------ 1619
Query: 296 HSPQAESMITSIGNPVQVLKVT 317
S + S G+PV V+++T
Sbjct: 1620 ---TQFSYVDSEGSPVGVVQLT 1638
Score = 56.2 bits (134), Expect = 7e-08
Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGL---DGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
L GP G PG G G+PG +G G PG GP G KGA G G PG G
Sbjct: 1433 LPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATG----PG--------G 1480
Query: 194 EKGDHGELGLQGNEGPPGQ-------KGEKGDKGDVSNDVLLAGAKGDQGPP--GPPGPP 244
KG+ G G G+ GPPG+ + K + V L+ + D+ P G PG P
Sbjct: 1481 PKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLM---QEDEAIPTGGAPGSP 1537
Query: 245 G 245
G
Sbjct: 1538 G 1538
>gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]
Length = 610
Score = 124 bits (310), Expect = 3e-28
Identities = 74/215 (34%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 78 GASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMVPIRVMVDLCNSTKGICL 137
G + PP P + PH S + + ++ ++ +
Sbjct: 164 GLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK------GEQSQASI 217
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG---- 184
GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 218 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 277
Query: 185 ----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD 234
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G+
Sbjct: 278 HGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRGE 335
Query: 235 QGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
GPPG PGPPGP GPPG PG + +G
Sbjct: 336 PGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 370
Score = 122 bits (307), Expect = 7e-28
Identities = 66/131 (50%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 409 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 468
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G G GE G+ G PG+KGEKG+ G + V G G +GPPGPPG G PGP G
Sbjct: 469 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPV--PGLPGPEGPPGPPGLQGVPGPKG 523
Query: 252 PPGSRRAKGPR 262
G AKG +
Sbjct: 524 EAGLDGAKGEK 534
Score = 107 bits (268), Expect = 2e-23
Identities = 61/148 (41%), Positives = 71/148 (47%), Gaps = 33/148 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
GP GP GPPG G PG G +G PG G KGEKG G+
Sbjct: 458 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQG 517
Query: 177 ----RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAK 232
+G+ G+ GA G G +GEKGD G LGL G GP G G G KG+ G+K
Sbjct: 518 VPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGE-------RGSK 570
Query: 233 GDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
GD G GP G G PG GPPG + +G
Sbjct: 571 GDPGMTGPTGAAGLPGLHGPPGDKGNRG 598
Score = 99.0 bits (245), Expect = 1e-20
Identities = 58/155 (37%), Positives = 69/155 (44%), Gaps = 32/155 (20%)
Query: 136 CLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
C GP G PG G PG G G PGP G G+ G G +G MG+ G G PG +G+K
Sbjct: 119 CPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 178
Query: 196 GDHGELG----------------------LQGN------EGPPGQKGEKGDKGDVSNDVL 227
G+ G+ G L+G +GPPG G G G + +
Sbjct: 179 GEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGH--- 235
Query: 228 LAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 236 -PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 269
Score = 99.0 bits (245), Expect = 1e-20
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 326 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 385
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 386 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 443
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
G++GP G PG GPPGP GPPG G + + G PGE
Sbjct: 444 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGE 486
Score = 96.7 bits (239), Expect = 5e-20
Identities = 60/150 (40%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 352 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 411
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G PPG GEKG +G G G G
Sbjct: 412 MGPPGLPGQIGPPGAPGIPGQKGEIGLPG---PPGHDGEKGPRGK-------PGDMGPPG 461
Query: 237 PPGPPGPPGPP------GPPGPPGSRRAKG 260
P GPPG GPP G PG PG + KG
Sbjct: 462 PQGPPGKDGPPGVKGENGHPGSPGEKGEKG 491
Score = 94.7 bits (234), Expect = 2e-19
Identities = 69/201 (34%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 315 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 371
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------------------------LA 229
G+ G G +G++G PG KGE D N+ L +
Sbjct: 372 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 430
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKAD 289
G KG+ G PGPPG G GP G PG GP+ P +G PG + ++ G
Sbjct: 431 GQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGP-PG----VKGENGHPGSPG 485
Query: 290 EKASEHHSPQAESMITSIGNP 310
EK + + QA S + + P
Sbjct: 486 EKGEKGETGQAGSPVPGLPGP 506
Score = 92.8 bits (229), Expect = 7e-19
Identities = 56/137 (40%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 143 PPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELG 202
P PG P G G+PG G G +G G G +G+ G G+P G KGD G G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHP---GPKGDMGLTG 167
Query: 203 LQGNEGPPGQKGEKGDKGDVSNDVLLA------------GAKGD------QGPPGPPGPP 244
G GP GQKGEKG G+ + L+ KG+ QGPPGPPGPP
Sbjct: 168 PPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPP 227
Query: 245 GPPGPPGPPGSRRAKGP 261
GP GP G PG GP
Sbjct: 228 GPSGPLGHPGLPGPMGP 244
Score = 90.1 bits (222), Expect = 5e-18
Identities = 50/100 (50%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 137 LTGPSGPPGPPGAGGLPGHNG---LDGQPGPQGPKGEKGANGKRG------KMGIPGAAG 187
L GP GPPGPPG G+PG G LDG G +G +GEKG G G +G+PG AG
Sbjct: 503 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAG 562
Query: 188 NPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL 227
GERG KGD G G G G PG G GDKG+ D L
Sbjct: 563 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGEDGL 602
Score = 48.1 bits (113), Expect = 2e-05
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G PGP G G +G KG+ G G G G+PG G PG++G +G+
Sbjct: 553 GPIGVPGPA------------GPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGED 600
Query: 199 GELGLQG 205
G L +QG
Sbjct: 601 G-LPVQG 606
Score = 42.4 bits (98), Expect = 0.001
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 19/74 (25%)
Query: 204 QGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGP------PGPPGPPGSRR 257
QG G PG G+ G +G G G G G PG PGP GPPG PG +
Sbjct: 124 QGPTGRPGLPGQPGTRG-------FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQG 176
Query: 258 AKGPRQPSMFNGQC 271
KG + GQC
Sbjct: 177 QKGEK------GQC 184
Score = 41.6 bits (96), Expect = 0.002
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIP 183
I + GP+GP G G+ G PG G G G G G G G RG+ G+P
Sbjct: 555 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGEDGLP 603
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 237 PPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPG 273
PP GP G PG PG PG+R G P +G+ PG
Sbjct: 120 PPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGK-PG 155
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 124 bits (310), Expect = 3e-28
Identities = 74/215 (34%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 78 GASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMVPIRVMVDLCNSTKGICL 137
G + PP P + PH S + + ++ ++ +
Sbjct: 155 GLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK------GEQSQASI 208
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG---- 184
GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 209 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 268
Query: 185 ----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD 234
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G+
Sbjct: 269 HGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRGE 326
Query: 235 QGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
GPPG PGPPGP GPPG PG + +G
Sbjct: 327 PGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 361
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 400 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 459
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 460 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 515
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 516 PGPPGLQGVPGPKGEAGLDG 535
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 509 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 568
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 569 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 621
Query: 257 RAKGPR 262
++GP+
Sbjct: 622 GSRGPK 627
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 317 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 376
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 377 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 434
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 435 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 492
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 493 KGEAGEKGNPGAE 505
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 484 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 543
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 544 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 596
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 597 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 643
Score = 94.4 bits (233), Expect = 2e-19
Identities = 62/141 (43%), Positives = 71/141 (50%), Gaps = 19/141 (13%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 306 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 362
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------LAGAKGDQGPPGPPGPPGPP 247
G+ G G +G++G PG KGE D N+ L L G G G GPPG PG P
Sbjct: 363 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 421
Query: 248 GP------PGPPGSRRAKGPR 262
G PGPPG KGPR
Sbjct: 422 GQKGEIGLPGPPGHDGEKGPR 442
Score = 92.8 bits (229), Expect = 7e-19
Identities = 57/146 (39%), Positives = 66/146 (45%), Gaps = 35/146 (23%)
Query: 142 GPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGE- 200
G PG G G PG GLDG+PG GPKG+ G G PG G G++GEKG GE
Sbjct: 125 GQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGP------PGQPGPQGQKGEKGQCGEY 178
Query: 201 ------------------LGLQGN------EGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
+ L+G +GPPG G G G + + G G G
Sbjct: 179 PHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGH----PGLPGPMG 234
Query: 237 PPGPPGPPGPPGPPGPPGSRRAKGPR 262
PPG PGPPGP G PG G KG R
Sbjct: 235 PPGLPGPPGPKGDPGIQGYHGRKGER 260
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 343 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 402
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 403 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 455
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 456 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 513
Score = 75.5 bits (184), Expect = 1e-13
Identities = 49/127 (38%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 165 QGPKGEKGANGKRGKMGIPGAA------------GNPGERGEKGDHGELGLQGNEGPPGQ 212
+ PK G N G PG G PG G KGD G G G GP GQ
Sbjct: 109 EAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQ 168
Query: 213 KGEKGDKGDVSNDVLLA------------GAKGD------QGPPGPPGPPGPPGPPGPPG 254
KGEKG G+ + L+ KG+ QGPPGPPGPPGP GP G PG
Sbjct: 169 KGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPG 228
Query: 255 SRRAKGP 261
GP
Sbjct: 229 LPGPMGP 235
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 573 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 626
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 627 KGDKGDQGAPGLDAPCPLGEDGLPVQ 652
>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
Length = 668
Score = 124 bits (310), Expect = 3e-28
Identities = 74/215 (34%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 78 GASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMVPIRVMVDLCNSTKGICL 137
G + PP P + PH S + + ++ ++ +
Sbjct: 193 GLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK------GEQSQASI 246
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG---- 184
GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 247 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 306
Query: 185 ----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD 234
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G+
Sbjct: 307 HGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRGE 364
Query: 235 QGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
GPPG PGPPGP GPPG PG + +G
Sbjct: 365 PGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 399
Score = 122 bits (307), Expect = 7e-28
Identities = 66/131 (50%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 438 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 497
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G G GE G+ G PG+KGEKG+ G + V G G +GPPGPPG G PGP G
Sbjct: 498 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPV--PGLPGPEGPPGPPGLQGVPGPKG 552
Query: 252 PPGSRRAKGPR 262
G AKG +
Sbjct: 553 EAGLDGAKGEK 563
Score = 109 bits (272), Expect = 7e-24
Identities = 62/150 (41%), Positives = 72/150 (48%), Gaps = 33/150 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
GP GP GPPG G PG G +G PG G KGEKG G+
Sbjct: 487 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQG 546
Query: 177 ----RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAK 232
+G+ G+ GA G G +GEKGD G LGL G GP G G G KG+ G+K
Sbjct: 547 VPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGE-------RGSK 599
Query: 233 GDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GD G GP G G PG GPPG + +G R
Sbjct: 600 GDPGMTGPTGAAGLPGLHGPPGDKGNRGER 629
Score = 107 bits (266), Expect = 4e-23
Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE----------------------KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLL 228
+ GE KG+ + +QG GPPG G G G
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGH------- 264
Query: 229 AGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 265 PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 298
Score = 105 bits (262), Expect = 1e-22
Identities = 65/149 (43%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 139 GPSGPPGPP---GAGGLPGHNGLDGQP-----GPQGPKGEKGANGKRGKMGIPGAAGNPG 190
GP+G PG P GA G+PG G G GP+GP G+ G G G G G G PG
Sbjct: 125 GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPG 184
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA------------GAKGD---- 234
G KGD G G G GP GQKGEKG G+ + L+ KG+
Sbjct: 185 HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQA 244
Query: 235 --QGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 245 SIQGPPGPPGPPGPSGPLGHPGLPGPMGP 273
Score = 105 bits (261), Expect = 1e-22
Identities = 62/147 (42%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDV---------------SNDVLLAGAKGDQGP 237
G KGD G G G GP GQKGEKG G+ S + L G +
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASI 246
Query: 238 PGPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGPPGPPGP GP G GP P
Sbjct: 247 QGPPGPPGPPGPSGPLGHPGLPGPMGP 273
Score = 103 bits (258), Expect = 3e-22
Identities = 62/134 (46%), Positives = 72/134 (53%), Gaps = 21/134 (15%)
Query: 137 LTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGAN------GKRGKMGIPGAAG 187
L GP GPPGPPG G+P G GLDG G +G +GEKG G G +G+PG AG
Sbjct: 532 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAG 591
Query: 188 NPGERGEKGD------HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
GERG KGD G GL G GPPG KG +G++G + G KGD+G G P
Sbjct: 592 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS----RGPKGDKGDQGAP 647
Query: 242 G--PPGPPGPPGPP 253
G P P G G P
Sbjct: 648 GLDAPCPLGEDGLP 661
Score = 99.0 bits (245), Expect = 1e-20
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 355 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 414
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 415 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 472
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
G++GP G PG GPPGP GPPG G + + G PGE
Sbjct: 473 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGE 515
Score = 96.7 bits (239), Expect = 5e-20
Identities = 60/150 (40%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 381 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 440
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G PPG GEKG +G G G G
Sbjct: 441 MGPPGLPGQIGPPGAPGIPGQKGEIGLPG---PPGHDGEKGPRGK-------PGDMGPPG 490
Query: 237 PPGPPGPPGPP------GPPGPPGSRRAKG 260
P GPPG GPP G PG PG + KG
Sbjct: 491 PQGPPGKDGPPGVKGENGHPGSPGEKGEKG 520
Score = 94.7 bits (234), Expect = 2e-19
Identities = 69/201 (34%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 344 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 400
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------------------------LA 229
G+ G G +G++G PG KGE D N+ L +
Sbjct: 401 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 459
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKAD 289
G KG+ G PGPPG G GP G PG GP+ P +G PG + ++ G
Sbjct: 460 GQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGP-PG----VKGENGHPGSPG 514
Query: 290 EKASEHHSPQAESMITSIGNP 310
EK + + QA S + + P
Sbjct: 515 EKGEKGETGQAGSPVPGLPGP 535
>gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]
Length = 695
Score = 124 bits (310), Expect = 3e-28
Identities = 74/215 (34%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 78 GASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMVPIRVMVDLCNSTKGICL 137
G + PP P + PH S + + ++ ++ +
Sbjct: 193 GLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK------GEQSQASI 246
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG---- 184
GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 247 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 306
Query: 185 ----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGD 234
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G+
Sbjct: 307 HGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRGE 364
Query: 235 QGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
GPPG PGPPGP GPPG PG + +G
Sbjct: 365 PGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 399
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 438 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 497
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 498 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 553
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 554 PGPPGLQGVPGPKGEAGLDG 573
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 547 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 606
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 607 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 659
Query: 257 RAKGPR 262
++GP+
Sbjct: 660 GSRGPK 665
Score = 107 bits (266), Expect = 4e-23
Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE----------------------KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLL 228
+ GE KG+ + +QG GPPG G G G
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGH------- 264
Query: 229 AGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 265 PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 298
Score = 105 bits (262), Expect = 1e-22
Identities = 65/149 (43%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 139 GPSGPPGPP---GAGGLPGHNGLDGQP-----GPQGPKGEKGANGKRGKMGIPGAAGNPG 190
GP+G PG P GA G+PG G G GP+GP G+ G G G G G G PG
Sbjct: 125 GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPG 184
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLA------------GAKGD---- 234
G KGD G G G GP GQKGEKG G+ + L+ KG+
Sbjct: 185 HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQA 244
Query: 235 --QGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 245 SIQGPPGPPGPPGPSGPLGHPGLPGPMGP 273
Score = 105 bits (261), Expect = 1e-22
Identities = 62/147 (42%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDV---------------SNDVLLAGAKGDQGP 237
G KGD G G G GP GQKGEKG G+ S + L G +
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASI 246
Query: 238 PGPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGPPGPPGP GP G GP P
Sbjct: 247 QGPPGPPGPPGPSGPLGHPGLPGPMGP 273
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 355 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 414
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 415 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 472
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 473 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 530
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 531 KGEAGEKGNPGAE 543
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 522 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 581
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 582 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 634
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 635 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 681
Score = 94.4 bits (233), Expect = 2e-19
Identities = 62/141 (43%), Positives = 71/141 (50%), Gaps = 19/141 (13%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 344 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 400
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------LAGAKGDQGPPGPPGPPGPP 247
G+ G G +G++G PG KGE D N+ L L G G G GPPG PG P
Sbjct: 401 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 459
Query: 248 GP------PGPPGSRRAKGPR 262
G PGPPG KGPR
Sbjct: 460 GQKGEIGLPGPPGHDGEKGPR 480
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 381 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 440
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 441 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 493
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 494 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 551
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 611 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 664
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 665 KGDKGDQGAPGLDAPCPLGEDGLPVQ 690
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 123 bits (309), Expect = 4e-28
Identities = 64/124 (51%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP G G PG G+ G G G PGP G G+KG +G G G GA G PG+RGE G
Sbjct: 749 GPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPP 808
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G G G GQ G KG+ GD AGAKGD GPPGP GP GPPGP G G+ A
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGD-------AGAKGDAGPPGPAGPAGPPGPIGNVGAPGA 861
Query: 259 KGPR 262
KG R
Sbjct: 862 KGAR 865
Score = 122 bits (306), Expect = 9e-28
Identities = 73/162 (45%), Positives = 84/162 (51%), Gaps = 29/162 (17%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAA------GNPG 190
LTGP GPPGP GA PG G G GP GP G +GA G RG+ G PG A G G
Sbjct: 765 LTGPIGPPGPAGA---PGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADG 821
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQ--------------- 235
+ G KG+ G+ G +G+ GPPG G G G + N V GAKG +
Sbjct: 822 QPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGN-VGAPGAKGARGSAGPPGATGFPGAA 880
Query: 236 ---GPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
GPPGP G GPPGPPGP G KGPR + G+ PGE
Sbjct: 881 GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGR-PGE 921
Score = 119 bits (297), Expect = 9e-27
Identities = 75/165 (45%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 131 STKGICLTGPSGP------PGPPGAGGLPGHNGLDGQP------GPQGPKGEKGANGKRG 178
ST GI + GP GP PGPPGA G G G G+P GP GP+G G GK G
Sbjct: 171 STGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNG 230
Query: 179 KMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPP 238
G G G PGERG G G GL G G PG KG +G G L GAKGD GP
Sbjct: 231 DDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSG-------LDGAKGDAGPA 283
Query: 239 GPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIPND 281
GP G PG PG G PG GPR G+ PG A ND
Sbjct: 284 GPKGEPGSPGENGAPGQ---MGPRGLPGERGRPGAPGPAGARGND 325
Score = 114 bits (286), Expect = 2e-25
Identities = 67/155 (43%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 139 GPSGPPGP------PGAGGLPGHNGLDGQPGP------QGPKGEKGANGKRGKMGIPGAA 186
GP GPPGP PGA G G G G+PGP GP GE+G G RG+ G G
Sbjct: 422 GPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLP 481
Query: 187 GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVS-----------NDVLLAGAKGDQ 235
G PGERG G G G G GP G GE+G G + L GAKG
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLT 541
Query: 236 GPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ 270
G PG PGP G GPPGP G GP P GQ
Sbjct: 542 GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQ 576
Score = 114 bits (285), Expect = 2e-25
Identities = 68/152 (44%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK- 195
LTG G PGP G G PG G DG+PGP GP G +G G G G GAAG PG+ GE+
Sbjct: 540 LTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERG 599
Query: 196 -----------GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPP 244
G GE G QG GP G GE+G++G AG+ G QG PGP GPP
Sbjct: 600 VPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP-------AGSPGFQGLPGPAGPP 652
Query: 245 GPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGE 274
G G PG G G PS G+ PGE
Sbjct: 653 GEAGKPGEQGVPGDLGAPGPSGARGERGFPGE 684
Score = 114 bits (285), Expect = 2e-25
Identities = 66/156 (42%), Positives = 73/156 (46%), Gaps = 38/156 (24%)
Query: 138 TGPSGPPGPPGAGGLPG------------HNGLDGQPGPQGPKGEKGANGKRGKMGIPGA 185
TGP+GPPG PGA G PG G G GP GP G +G G +G G G
Sbjct: 1039 TGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGE 1098
Query: 186 AGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKG-------------------DVSNDV 226
G G+RG KG G GLQG GPPG GE+G G D N +
Sbjct: 1099 TGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGL 1158
Query: 227 L-------LAGAKGDQGPPGPPGPPGPPGPPGPPGS 255
G GD GP GPPGPPGPPGPPGPP +
Sbjct: 1159 PGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSA 1194
Score = 113 bits (282), Expect = 5e-25
Identities = 70/171 (40%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 139 GPSGPPGPPGAGGLPGHN------------GLDGQPGPQGPKGEKGANGKRGKMGIPGAA 186
GP GP GPPG G PG + G DG PG +G +GE G G G G PGA
Sbjct: 995 GPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAP 1054
Query: 187 GNPGERGEKGDHGE---------LGLQGNEGPPGQKGEKGDKGDV--SNDVLLAGAKGDQ 235
G G G+ GD GE +G G GP G +G +GDKG+ D + G +G
Sbjct: 1055 GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFS 1114
Query: 236 GPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVG 286
G GPPGPPG PG GP G+ GPR P PG A P D L G
Sbjct: 1115 GLQGPPGPPGSPGEQGPSGASGPAGPRGP-------PGSAGA-PGKDGLNG 1157
Score = 112 bits (280), Expect = 9e-25
Identities = 67/174 (38%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPG---------------------PQGPKGEKGANGKR 177
G GPPGP GA G G+ G DGQPG P GP+G G G +
Sbjct: 371 GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPK 430
Query: 178 GKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGP 237
G G PGA G+ G+ G KG+ G +G+QG GP G++G++G +G+ L G G++G
Sbjct: 431 GNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE-PGPTGLPGPPGERGG 489
Query: 238 PGP---PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQC--PGETCAIPNDDTLVG 286
PG PG G GP GP G R + GP P G+ PGE +P L G
Sbjct: 490 PGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE-AGLPGAKGLTG 542
Score = 112 bits (280), Expect = 9e-25
Identities = 64/149 (42%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGP------------KGEKGANGKRGKMGIPGAA 186
G GP G G G PG G+ G PGP GP KG+ GA G G G PG
Sbjct: 668 GAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQ 727
Query: 187 GNPGER------GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP 240
G PGER G KGD G+ G +G +G PG+ G +G G + AGA GD+G GP
Sbjct: 728 GMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPG-PAGAPGDKGESGP 786
Query: 241 PGPPGPPGPPGPPGSRRAKGPRQPSMFNG 269
GP GP G G PG R GP P+ F G
Sbjct: 787 SGPAGPTGARGAPGDRGEPGPPGPAGFAG 815
Score = 112 bits (279), Expect = 1e-24
Identities = 63/146 (43%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G SGP GP G G PG NG DG+ G G GE+G G +G G+PG AG PG +G +G
Sbjct: 212 GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS 271
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLL-----------------AGAKGDQ---GPP 238
G G +G+ GP G KGE G G+ + AGA+G+ G
Sbjct: 272 GLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAA 331
Query: 239 GPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGP GP GPPG PG+ AKG P
Sbjct: 332 GPPGPTGPAGPPGFPGAVGAKGEAGP 357
Score = 112 bits (279), Expect = 1e-24
Identities = 59/122 (48%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP+GP G G G G G G PGP GP GE GK G+ G+PG G PG G +G+
Sbjct: 623 GPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEA---GKPGEQGVPGDLGAPGPSGARGER 679
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G +G +GPPG G +G G ND GAKGD G PG PG G PG G PG R A
Sbjct: 680 GFPGERGVQGPPGPAGPRGANGAPGND----GAKGDAGAPGAPGSQGAPGLQGMPGERGA 735
Query: 259 KG 260
G
Sbjct: 736 AG 737
Score = 111 bits (277), Expect = 2e-24
Identities = 57/124 (45%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GP GP G G PG G G+ GPQGP+G +G G RG+ G PG AG G G G
Sbjct: 332 GPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGAD 391
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G+ G +G G PG G G G G G QGP GPPGP G G PG PGS+
Sbjct: 392 GQPGAKGANGAPGIAGAPGFPG-------ARGPSGPQGPGGPPGPKGNSGEPGAPGSKGD 444
Query: 259 KGPR 262
G +
Sbjct: 445 TGAK 448
Score = 110 bits (276), Expect = 3e-24
Identities = 63/151 (41%), Positives = 75/151 (49%), Gaps = 28/151 (18%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAA------GNP 189
G GP GPPG G PG G+ G PGP G +GE+G G+RG G PG A G P
Sbjct: 644 GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAP 703
Query: 190 GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--------- 240
G G KGD G G G++G PG +G G++G L G KGD+G GP
Sbjct: 704 GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAG----LPGPKGDRGDAGPKGADGSPGK 759
Query: 241 ------PGPPGPPGPPGPPGSRRAKGPRQPS 265
GP GPPGP G PG + GP P+
Sbjct: 760 DGVRGLTGPIGPPGPAGAPGDKGESGPSGPA 790
Score = 110 bits (274), Expect = 4e-24
Identities = 61/127 (48%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PGP GA G PG G G PGP G G G +G+ G G PG AG GERGE+G
Sbjct: 578 GVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPA 637
Query: 199 GELGLQGNEGPPGQKGEKGDKGD--VSNDVLL---AGAKGDQGPPGPPGPPGPPGPPGPP 253
G G QG GP G GE G G+ V D+ +GA+G++G PG G GPPGP GP
Sbjct: 638 GSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPR 697
Query: 254 GSRRAKG 260
G+ A G
Sbjct: 698 GANGAPG 704
Score = 109 bits (273), Expect = 6e-24
Identities = 57/127 (44%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PG G G PG G G+PG QGP G G G G MG PG AG PGE G +G
Sbjct: 959 GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAP 1018
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G G +G PG KG++G+ G G G PG PG PGP GP G G R
Sbjct: 1019 GAEGSPGRDGSPGAKGDRGE----------TGPAGPPGAPGAPGAPGPVGPAGKSGDRGE 1068
Query: 259 KGPRQPS 265
GP P+
Sbjct: 1069 TGPAGPA 1075
Score = 108 bits (270), Expect = 1e-23
Identities = 59/137 (43%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANG-------------KRGKMGIPGA 185
GP GP GPPG G+PG GL G PGP GP G G G G + +PG
Sbjct: 121 GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP 180
Query: 186 AGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVS--NDVLLAGAKGDQGPPGPPGP 243
G G RG G G G QG +GPPG+ GE G G + G GD G G PG
Sbjct: 181 MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR 240
Query: 244 PGPPGPPGPPGSRRAKG 260
PG GPPGP G+R G
Sbjct: 241 PGERGPPGPQGARGLPG 257
Score = 108 bits (270), Expect = 1e-23
Identities = 60/138 (43%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 138 TGPSGPPGPP---------------GAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGI 182
+G +GPPGPP G G PG G G PGP G KG GA+G G G
Sbjct: 889 SGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGT 948
Query: 183 PGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG 242
PG G G+RG G G+ G +G G PG GE G +G +GA G++GPPGP G
Sbjct: 949 PGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGP-------SGASGERGPPGPMG 1001
Query: 243 PPGPPGPPGPPGSRRAKG 260
PPG GPPG G A G
Sbjct: 1002 PPGLAGPPGESGREGAPG 1019
Score = 108 bits (269), Expect = 2e-23
Identities = 61/137 (44%), Positives = 72/137 (52%), Gaps = 22/137 (16%)
Query: 139 GPSGPPGPPGAGGLPGHNGLD------GQPGPQGPKGEKGA------NGKRGKMGIPGAA 186
G GPPGPPG G G G D G PGPQG G++G G+RG G+PG +
Sbjct: 920 GEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPS 979
Query: 187 GNPGERGEKGDHGELGLQGNEGPP---------GQKGEKGDKGDVSNDVLLAGAKGDQGP 237
G PG++G G GE G G GPP G++G G +G D GAKGD+G
Sbjct: 980 GEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDG-SPGAKGDRGE 1038
Query: 238 PGPPGPPGPPGPPGPPG 254
GP GPPG PG PG PG
Sbjct: 1039 TGPAGPPGAPGAPGAPG 1055
Score = 107 bits (268), Expect = 2e-23
Identities = 67/155 (43%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPG---------------PQGPKGEKGANGKRGKMGIP 183
G GPPGP GA GLPG GL G G P GPKGE G+ G+ G G
Sbjct: 242 GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM 301
Query: 184 GAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL--LAGAKGDQGPPGPP 241
G G PGERG G G G +GN+G G G G G GAKG+ GP GP
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPR 361
Query: 242 GPPGPP---GPPGPPGSRRAKGPRQPSMFNGQCPG 273
G GP G PGPPG A GP +GQ PG
Sbjct: 362 GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQ-PG 395
Score = 107 bits (268), Expect = 2e-23
Identities = 65/151 (43%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP---GERGE 194
TGP+GPPG PGA G G G G G +GP+G +G G G G G AGNP G+ G
Sbjct: 337 TGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGA 396
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKG--------DVSNDVLLAGAKGD---QGPPGPPGP 243
KG +G G+ G G PG +G G +G S + G+KGD +G PGP G
Sbjct: 397 KGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGV 456
Query: 244 PGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
GPPGP G G R A+G P+ G PGE
Sbjct: 457 QGPPGPAGEEGKRGARGEPGPTGLPGP-PGE 486
Score = 107 bits (267), Expect = 3e-23
Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G GPPGP G G PG G G+ G +GP+GE G G+ G++G PG G GE+G G
Sbjct: 881 GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGAD 940
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G G GP G G++G G L G +G++G PG PGP G PG GP G+
Sbjct: 941 GPAGAPGTPGPQGIAGQRGVVG-------LPGQRGERGFPGLPGPSGEPGKQGPSGASGE 993
Query: 259 KGPRQP 264
+GP P
Sbjct: 994 RGPPGP 999
Score = 107 bits (267), Expect = 3e-23
Identities = 58/126 (46%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GPSG PG G G G G PGP GP G G G+ G+ G PGA G+PG G G
Sbjct: 975 LPGPSGEPGKQGPSGASGER---GPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPG 1031
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G+ G G GPPG G G G V AG GD+G GP GP GP GP G G
Sbjct: 1032 AKGDRGETGPAGPPGAPGAPGAPGPVGP----AGKSGDRGETGPAGPAGPVGPVGARGPA 1087
Query: 257 RAKGPR 262
+GPR
Sbjct: 1088 GPQGPR 1093
Score = 106 bits (265), Expect = 5e-23
Identities = 65/169 (38%), Positives = 75/169 (44%), Gaps = 38/169 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGL---DGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER--- 192
GP+G PGPPG G PG G DG GP+GP GE+G+ G G G PG AG PGE
Sbjct: 476 GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
Query: 193 ---------------GEKGDHGELGLQGNEGPPGQKGEKGDKG--------DVSNDVLLA 229
G+ G G G G GPPG G +G G + + A
Sbjct: 536 GAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKA 595
Query: 230 GAKGDQGPPGPPGP---------PGPPGPPGPPGSRRAKGPRQPSMFNG 269
G +G GPPG GP GPPGP GP G R +GP F G
Sbjct: 596 GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQG 644
Score = 100 bits (250), Expect = 3e-21
Identities = 60/147 (40%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNP--------- 189
G +G PG G GLPG G G PGP G +G GA G G G G AG P
Sbjct: 293 GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAK 352
Query: 190 ---GERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGP 246
G +G +G G G++G GPPG G G G+ D GAKG G PG G PG
Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG-QPGAKGANGAPGIAGAPGF 411
Query: 247 PGPPGPPGSRRAKGPRQPSMFNGQCPG 273
PG GP G + GP P +G+ PG
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGE-PG 437
Score = 100 bits (249), Expect = 3e-21
Identities = 58/132 (43%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
GP GP GP G PGP G G GA G RG G PGA G PG G G
Sbjct: 839 GPPGPAGPA------------GPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPP 886
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G G GPPG G++G KG + AG G+ GPPGPPGP G G PG G A
Sbjct: 887 GPSGNAGPPGPPGPAGKEGGKGP-RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGA 945
Query: 259 KGPRQPSMFNGQ 270
G P GQ
Sbjct: 946 PGTPGPQGIAGQ 957
Score = 99.0 bits (245), Expect = 1e-20
Identities = 60/135 (44%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G +GP GP G G PG NG GQ GP+G GE RG+ G PG AG G G G
Sbjct: 278 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE------RGRPGAPGPAGARGNDGATGAA 331
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRA 258
G G G GPPG G G KG+ G++G QG G PGPPGP G GP G+ A
Sbjct: 332 GPPGPTGPAGPPGFPGAVGAKGEAGPQG-PRGSEGPQGVRGEPGPPGPAGAAGPAGNPGA 390
Query: 259 KGPRQPSMFNGQCPG 273
G NG PG
Sbjct: 391 DGQPGAKGANG-APG 404
Score = 82.0 bits (201), Expect = 1e-15
Identities = 49/116 (42%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKG-- 214
G++G G GP+G +G G G+ GIPG G PG G G G GL GN P G
Sbjct: 109 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYD 168
Query: 215 EKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP------GPPGPPGSRRAKGPRQP 264
EK G + + G G GP G PGPPG P GPPG PG A GP P
Sbjct: 169 EKSTGG-----ISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGP 219
Score = 59.3 bits (142), Expect = 9e-09
Identities = 48/141 (34%), Positives = 53/141 (37%), Gaps = 43/141 (30%)
Query: 162 PGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGD 221
PG + P+GE G P G G KGD G G +G GPPG+ G
Sbjct: 82 PGAEVPEGECCPVCPDGSES-PTDQETTGVEGPKGDTGPRGPRGPAGPPGRDG------- 133
Query: 222 VSNDVLLAGAKGDQGPPGPPGPPGP-------------------------PGPPGPPGSR 256
+ G G GPPGPPGPPGP PGP GP G R
Sbjct: 134 ------IPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPR 187
Query: 257 RAKGP---RQPSMFNGQCPGE 274
GP P F G PGE
Sbjct: 188 GLPGPPGAPGPQGFQGP-PGE 207
Score = 41.6 bits (96), Expect = 0.002
Identities = 20/37 (54%), Positives = 20/37 (54%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGA 173
L GP GPPGP G G G G G PGP GP G A
Sbjct: 1158 LPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSA 1194
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 122 bits (307), Expect = 7e-28
Identities = 71/149 (47%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G L GP G PGP G G PG G G PGP+GP G G G +G+ G PG G PG G
Sbjct: 1244 GPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPG 1303
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKG--------DVSNDVLLAGAKGDQGPPGPPGPPG 245
KGD G GLQGN G PG G KGD G + + G+ G +G PG GPPG
Sbjct: 1304 LKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPG 1363
Query: 246 PPGPPGPPG-SRRAKGPRQPSMFNGQCPG 273
PPG PGP G S KG P GQ PG
Sbjct: 1364 PPGLPGPSGQSIIIKGDAGPPGIPGQ-PG 1391
Score = 115 bits (287), Expect = 1e-25
Identities = 64/126 (50%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE--RGE 194
L GP G PG PG G+ G G G PGP GP G G G G G+PG GN G +G
Sbjct: 166 LPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGP 225
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPG 254
KG+ GE GLQG GPPGQ E+ DV G GD+GPPGPPG GPPGPPG G
Sbjct: 226 KGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPG--G 283
Query: 255 SRRAKG 260
+ KG
Sbjct: 284 EKGEKG 289
Score = 114 bits (284), Expect = 3e-25
Identities = 67/149 (44%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDH 198
G G PGPPG G+ G GL G PG G G G +G G GIPG G GERG G
Sbjct: 78 GDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSP 137
Query: 199 GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP---------------GP 243
G GLQG GPPG G KG+ G + L G KG+ G PGPP GP
Sbjct: 138 GFPGLQGPPGPPGIPGMKGEPGSIIMS-SLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGP 196
Query: 244 PGPPGPPGPPGSRRAKGPRQPSMFNGQCP 272
PGPPG GPPG GP+ N Q P
Sbjct: 197 PGPPGLMGPPGPPGLPGPKGNMGLNFQGP 225
Score = 110 bits (275), Expect = 3e-24
Identities = 72/153 (47%), Positives = 76/153 (49%), Gaps = 25/153 (16%)
Query: 134 GICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAG 187
GI L GP GP PGPPGA G PG GL+G PGP G G KG G +PG G
Sbjct: 705 GIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPG----FALPGPPG 760
Query: 188 NPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
PG G KG G G +G GPPG G G G L G KGD GP G PGP GPP
Sbjct: 761 PPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG-------LPGPKGDVGPNGQPGPMGPP 813
Query: 248 GPP-----GPPGSRRAKGP-RQPSMFNGQCPGE 274
G P GPPG GP QP + PGE
Sbjct: 814 GLPGIGVQGPPGPPGIPGPIGQPGLHG--IPGE 844
Score = 109 bits (272), Expect = 7e-24
Identities = 65/157 (41%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
+ G GP GPPG+ GLPG G G PG +G G G G G +GIPG +G PG +G+ G
Sbjct: 867 IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDG 926
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVS-NDVLLAGAKGDQGPPGPPGPPGPPGP------ 249
G+ GL G G G KGE G G D L G+KG++G PG PG PG GP
Sbjct: 927 LQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGL 986
Query: 250 PGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVG 286
PG PG G QP + P +P L+G
Sbjct: 987 PGDPGQPGLSG--QPGLPGPPGPKGNPGLPGQPGLIG 1021
Score = 108 bits (269), Expect = 2e-23
Identities = 74/198 (37%), Positives = 91/198 (45%), Gaps = 45/198 (22%)
Query: 127 DLCNSTKGICLTGPSGP------PGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKM 180
D C + G ++GP G PGPPG+ G PG G GQ G GPKG G G G
Sbjct: 479 DTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAP 538
Query: 181 GIPGAAGNPGE----RGEKGDHGEL------------GLQGNEGPPGQKGEKGDKGDVSN 224
G PG+ G PG+ G KGD GEL G G +G PG G KG+ G ++
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIT- 597
Query: 225 DVLLAGAKGDQGPPGPPGPPGPP-----------GPPGPPGSRRAKG----PRQPSMFNG 269
KG++GPPG PG PG P GPPGP G + +G P QP +
Sbjct: 598 ------FKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGP 651
Query: 270 Q-CPGETCAIPNDDTLVG 286
+ PG+T P L G
Sbjct: 652 KGDPGQTITQPGKPGLPG 669
Score = 108 bits (269), Expect = 2e-23
Identities = 65/148 (43%), Positives = 77/148 (52%), Gaps = 30/148 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQG-----PKGEKGANGKRGKMGIPGAAGNPG--- 190
GP G G PG G+PG G G+PG G P G G +G++G G+PG GNPG
Sbjct: 1161 GPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPG 1220
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDVLLAGAKGDQGPPGPPGP----- 243
+GE G HG G+QG GPPG G +G KG+ G QGPPG PGP
Sbjct: 1221 PKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGN----------PGPQGPPGRPGPTGFQG 1270
Query: 244 -PGPPGPPGPPGSRRAKG----PRQPSM 266
PGP GPPG PG+ KG P QP +
Sbjct: 1271 LPGPEGPPGLPGNGGIKGEKGNPGQPGL 1298
Score = 107 bits (266), Expect = 4e-23
Identities = 64/146 (43%), Positives = 77/146 (52%), Gaps = 18/146 (12%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGN------PG 190
++GP G G PG G PG +G G PGP GPKG G G+ G +G PG G PG
Sbjct: 977 VSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPG 1036
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL----LAGAKGDQGPPGPPGPP-- 244
+G +G G G+ G G PG G+KGDKGD + L G KG+ G PG PG P
Sbjct: 1037 PQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGI 1096
Query: 245 ----GPPGPPGPPGSRRAKGPRQPSM 266
G PG PG PG+ AKG QP +
Sbjct: 1097 KGSVGDPGLPGLPGTPGAKG--QPGL 1120
Score = 107 bits (266), Expect = 4e-23
Identities = 62/133 (46%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPG---AAGNPGERGEK 195
G G PG PGA G PG G G PGP GPKG G G G G PG G+PG+ G
Sbjct: 1104 GLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPP 1163
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL----LAGAKGDQGPPGPPGPPGPPGPPG 251
G+ G+ G G GP GQKGE G G + L+G KGD G PG PG PG PGP G
Sbjct: 1164 GEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKG 1223
Query: 252 PPGSRRAKGPRQP 264
PG G + P
Sbjct: 1224 EPGFHGFPGVQGP 1236
Score = 107 bits (266), Expect = 4e-23
Identities = 56/128 (43%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
+ G G PG PG GLPG G G PG QG G G NG +G G+PG G PG +G G
Sbjct: 1286 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG 1345
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G G +G G G G G G +++ KGD GPPG PG PG G PGP G +
Sbjct: 1346 VPGSAGPEGEPGLIGPPGPPGLPGPSGQSIII---KGDAGPPGIPGQPGLKGLPGPQGPQ 1402
Query: 257 RAKGPRQP 264
GP P
Sbjct: 1403 GLPGPTGP 1410
Score = 105 bits (263), Expect = 8e-23
Identities = 62/133 (46%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G L GP GPPG PG G G G G PGP GP G G +G G G G G PG G
Sbjct: 752 GFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMG 811
Query: 194 EKGDHGELGLQGNEGPP------------GQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
G G +G+QG GPP G GEKGD G DV G G++G PG P
Sbjct: 812 PPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDV--PGPPGERGSPGIP 868
Query: 242 GPPGPPGPPGPPG 254
G PGP GPPG PG
Sbjct: 869 GAPGPIGPPGSPG 881
Score = 105 bits (261), Expect = 1e-22
Identities = 71/181 (39%), Positives = 80/181 (44%), Gaps = 55/181 (30%)
Query: 139 GPSGPPGPPGA----------------GGLPGHNGLDGQPGPQGPKGEKGAN-GKRGKMG 181
G GPPGPPG GLPG G G PG +GP G G G++G+ G
Sbjct: 233 GLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQG 292
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQ------KGEKGDKGDVSNDVL-------- 227
PG G PG+ GE G G GL G+ G PG+ KG+KGD G L
Sbjct: 293 EPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTG 352
Query: 228 -------------LAGAKGD------QGPPGPPGPP-----GPPGPPGPPGSRRAKGPRQ 263
L G KG+ QGPPG PGPP GPPGPPG PG R KG
Sbjct: 353 ITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEG 412
Query: 264 P 264
P
Sbjct: 413 P 413
Score = 105 bits (261), Expect = 1e-22
Identities = 57/141 (40%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 135 ICLTGPSGPPGPPGAGGLPGHNGLDGQPG-------------PQGPKGEKGANGKRGKMG 181
IC GP GPPG PG GL G G+ G G P G G G G G +G
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLG 509
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
PG G G+ G G G G+ G G PG G KG+ GD+ + G KG+ G PG P
Sbjct: 510 FPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAP 569
Query: 242 GPPGPPGPPGPPGSRRAKGPR 262
G PG PG PG G GP+
Sbjct: 570 GLPGLPGTPGQDGLPGLPGPK 590
Score = 104 bits (260), Expect = 2e-22
Identities = 64/142 (45%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGE------KGANGKRGKMGIPGAAGNPGER 192
G G PG PG GLPG G DG PG GPKGE KG G G G+PG GN G
Sbjct: 561 GELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPM 620
Query: 193 GEKG-----DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLL---------AGAKGDQGPP 238
G G GE G+QG G PGQ G G KGD + G GD G P
Sbjct: 621 GPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLP 680
Query: 239 GPPGPPGPPGPPGPPGSRRAKG 260
G PG PG PG PG PGS+ G
Sbjct: 681 GDPGLPGQPGLPGIPGSKGEPG 702
Score = 104 bits (259), Expect = 2e-22
Identities = 59/127 (46%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 139 GPSGPPGPP-----GAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERG 193
G GPPGP G+ G G GL G PG GPKG +G G G+ G+ G G PG G
Sbjct: 947 GLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPG 1006
Query: 194 EKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPP 253
KG+ G G G GPPG KG GD G G +G +GPPGP G PG PG PG P
Sbjct: 1007 PKGNPGLPGQPGLIGPPGLKGTIGDMG-------FPGPQGVEGPPGPSGVPGQPGSPGLP 1059
Query: 254 GSRRAKG 260
G + KG
Sbjct: 1060 GQKGDKG 1066
Score = 103 bits (256), Expect = 5e-22
Identities = 65/152 (42%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP G PG PG G PG G G PG G G GA G+ G G PG G PG +G G
Sbjct: 1078 LPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISG 1137
Query: 197 DHGELGLQGNEGP------PGQKGEKGDKGDVSNDVL--LAGAKGDQGPP--GPPGPPGP 246
G GL G GP PGQ G G+KG D + AG KG+ G P G PGPPG
Sbjct: 1138 PPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGL 1197
Query: 247 P---------GPPGPPGSRRAKGPRQPSMFNG 269
P G PG PG+ GP+ F+G
Sbjct: 1198 PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHG 1229
Score = 102 bits (254), Expect = 9e-22
Identities = 68/172 (39%), Positives = 77/172 (44%), Gaps = 33/172 (19%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKG----EKGAN---GKRGKMGIPGAAGNP 189
+ G G PG PG G G G G GP GP G G G++G +G+PG G
Sbjct: 311 IPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEK 370
Query: 190 GERGEKGDHGELGL--------QGNEGPPGQKGEKGDKGD-------VSNDVLLAGAKGD 234
GERG G G GL G GPPG GE+G KGD + L G G
Sbjct: 371 GERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGA 430
Query: 235 QGPPGPPGPPGP----------PGPPGPPGSRRAKGPRQPSMFNGQCPGETC 276
G PGPPGP GP PGPPGPPGS KG + G G+TC
Sbjct: 431 PGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGD-KGDTC 481
Score = 102 bits (254), Expect = 9e-22
Identities = 68/159 (42%), Positives = 71/159 (44%), Gaps = 31/159 (19%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQ--------GPKGEKGANGKRGKMGI------PG 184
GPSG PG PG+ GLPG G G PG GPKGE G G G GI PG
Sbjct: 1045 GPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPG 1104
Query: 185 AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPP 244
G PG G KG G G G GPPG KG G G+ G G+ GP G G P
Sbjct: 1105 LPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGN-------PGLPGEPGPVGGGGHP 1157
Query: 245 GPPGPPGP---------PGSRRAKG-PRQPSMFNGQCPG 273
G PGPPG PG KG P QP N PG
Sbjct: 1158 GQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPG 1196
Score = 101 bits (252), Expect = 2e-21
Identities = 58/140 (41%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGN-------- 188
L G G PG PG G PG G G PG GP+GE G G G G+PG +G
Sbjct: 1322 LNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDA 1381
Query: 189 --------PGERGEKGDHGELGLQGNEGPPGQKGEKG-----DKGDVSNDVLLAGAKGDQ 235
PG +G G G GL G GPPG G G G D L G G +
Sbjct: 1382 GPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTR 1441
Query: 236 GPPGPPGPPGPPGPPGPPGS 255
G GPPGP G GPPGPPG+
Sbjct: 1442 GLDGPPGPDGLQGPPGPPGT 1461
Score = 101 bits (251), Expect = 2e-21
Identities = 67/157 (42%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 138 TGPSGPPG----PPGAG------------GLPGHNGLDGQPGPQGPKGEKGANGKRGKMG 181
TGP GPPG PG G GLPG G G PG QGP G G G MG
Sbjct: 336 TGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGA-AVMG 394
Query: 182 IPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGP---- 237
PG G PGERG+KGD G G+ GPPG G+ G G L G G GP
Sbjct: 395 PPGPPGFPGERGQKGDEGPPGIS-IPGPPGLDGQPGAPG-------LPGPPGPAGPHIPP 446
Query: 238 ------PGPPGPPGPPGPPGPPGSRRAKGPRQPSMFN 268
PGPPGPPG PG G G + KG + + FN
Sbjct: 447 SDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFN 483
Score = 98.6 bits (244), Expect = 1e-20
Identities = 69/162 (42%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 132 TKG-ICLTGPSGPPGP---PGAGGLPG---HNGLDGQPGPQGPKGEKGANGKRGKMGIPG 184
TKG + + GP GPPGP PG G+PG +GL GQPG GP GEKG+ G+ G G PG
Sbjct: 894 TKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPG 953
Query: 185 AAGNP--GERGEKGDHGELGLQGNEGPPGQKGEKGDKGD--VSNDVLLAGAKGDQGP--- 237
G +GEKG+ G G+ G GP G +G GD G +S L G G +G
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGL 1013
Query: 238 ------PGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPG 273
GPPG G G G PG + +GP PS GQ PG
Sbjct: 1014 PGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQ-PG 1054
Score = 97.1 bits (240), Expect = 4e-20
Identities = 66/162 (40%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 137 LTGPSGPPGP----PGAGGLPGHNGLDGQ------PGPQGPKGEKGANGKRGKMGIPGAA 186
+ GP G PG PG GLPG+ G DG PG G G G G +G+ GIPG
Sbjct: 648 IPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIG 707
Query: 187 -----------GNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKG----DVSNDVLLAGA 231
G PG G G G +GL+G GPPG G KG+ G L G
Sbjct: 708 LPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGF 767
Query: 232 KGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPG 273
KG GP G G PGPPGPPG G GP+ NGQ PG
Sbjct: 768 KGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQ-PG 808
Score = 95.9 bits (237), Expect = 9e-20
Identities = 67/154 (43%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDG---QPGPQGPKGEKGANGKRGKMGIPGAAG-------- 187
G GPPG PG G G GL G PG GPKGE G +G G G PG G
Sbjct: 1190 GNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Query: 188 ---NPGERGEKGDHGELGLQGNEGP------PGQKGEKGDKGDVSNDVL--LAGAKGDQG 236
NPG +G G G G QG GP PG G KG+KG+ L L G KGDQG
Sbjct: 1250 PKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQG 1309
Query: 237 P------PGPP---GPPGPPGPPGPPGSRRAKGP 261
P PG P G G PG PG PG KGP
Sbjct: 1310 PPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGP 1343
Score = 70.1 bits (170), Expect = 5e-12
Identities = 42/91 (46%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 179 KMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPP 238
K G G GERG G G GL G GP G G +G KGD G KG +GPP
Sbjct: 37 KCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGD-DGIPGPPGPKGIRGPP 95
Query: 239 GPPGPPGPPGPPGPPGSRRAKGPRQPSMFNG 269
G PG PG PG PG PG A GP+ NG
Sbjct: 96 GLPGFPGTPGLPGMPGHDGAPGPQGIPGCNG 126
Score = 53.5 bits (127), Expect = 5e-07
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 137 LTGPSGPPGPPGAGGLPGHNG---------LDGQPGPQGPKGEKGANGKRGKMGIPGAA 186
L GP+GPPG PG GLPG +G L GQPG +G G G +G +G G PG +
Sbjct: 1404 LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1462
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 217 GDKGDVSNDVLLAGAKGDQGPPG---PPGPPGPPGPPGPPGSRRAKG 260
G K D S + G KG++G PG PG PG PGP GPPG R KG
Sbjct: 35 GSKCDCSG---IKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKG 78
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 327
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 328 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 385
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 386 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 421
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 460 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 519
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 520 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 575
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 576 PGPPGLQGVPGPKGEAGLDG 595
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 569 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 628
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 629 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 681
Query: 257 RAKGPR 262
++GP+
Sbjct: 682 GSRGPK 687
Score = 102 bits (255), Expect = 7e-22
Identities = 67/176 (38%), Positives = 71/176 (40%), Gaps = 54/176 (30%)
Query: 140 PSGPPGPPGAGGLPGHNGLDGQPG--------------PQGPKGEKGANGKRGKMGIPGA 185
P GPPGP G GLPG G G PG P+GP G+ G G G G G
Sbjct: 120 PPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL 179
Query: 186 AGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGD------------------------ 221
G PG G KGD G G G GP GQKGEKG G+
Sbjct: 180 DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKL 239
Query: 222 --VSNDVLLA--------------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
+ N V LA QGPPGPPGPPGP GP G PG GP
Sbjct: 240 LPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 295
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 336 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 395
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 396 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 455
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 456 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 502
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 377 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 436
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 437 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 494
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 552
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 553 KGEAGEKGNPGAE 565
Score = 98.6 bits (244), Expect = 1e-20
Identities = 94/337 (27%), Positives = 121/337 (35%), Gaps = 106/337 (31%)
Query: 5 AEGGRGDAGWGLRGALAAVAL------------------LSALNAAGTVFALCQWRGLSS 46
A G RG G G +A VA L+ + A ++ A + L +
Sbjct: 11 ATGARGPGELGAPGTVALVAARAERGARLPSPGSCGLLTLALCSLALSLLAHFRTAELQA 70
Query: 47 ALRALEAQRGREQREDSALRSFLAELSR-----------APR---GASAPPQDPASSARN 92
+ LEA+RG +Q E + L L AP+ G + PP P + R
Sbjct: 71 RVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTGR- 129
Query: 93 KRSHSGEPAPHIRAESHDMLMMMTYSMVPIRVMVDLCNSTKGICLTGPSGPPGPPGAGGL 152
P + + + M P RV G+ + GP GPPG PG G
Sbjct: 130 ---------PGLPGDKGAIGM-------PGRVGSP---GDAGLSIIGPRGPPGQPGTRGF 170
Query: 153 PGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE--------------- 194
PG GLDG+PG GPKG+ G G G+ G G G G+ GE
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 195 -----------------------------KGDHGELGLQGNEGPPGQKGEKGDKGDVSND 225
+G+ + +QG GPPG G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGH---- 286
Query: 226 VLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 287 ---PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 320
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 544 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 603
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 604 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 656
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 657 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 703
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 403 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 462
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 463 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 515
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 516 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 573
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 633 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 686
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 687 KGDKGDQGAPGLDAPCPLGEDGLPVQ 712
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 206 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 265
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 266 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 323
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 324 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 359
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 398 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 457
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 458 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 513
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 514 PGPPGLQGVPGPKGEAGLDG 533
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 507 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 566
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 567 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 619
Query: 257 RAKGPR 262
++GP+
Sbjct: 620 GSRGPK 625
Score = 113 bits (282), Expect = 5e-25
Identities = 60/135 (44%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNG---LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG G LDG+PG GPKG+ G G G+ G G G G
Sbjct: 131 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 190
Query: 191 ERGE---KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+ GE +G+ + +QG GPPG G G G G G GPPG PGPPGP
Sbjct: 191 QCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPK 243
Query: 248 GPPGPPGSRRAKGPR 262
G PG G KG R
Sbjct: 244 GDPGIQGYHGRKGER 258
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 274 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 333
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 334 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 393
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 394 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 440
Score = 100 bits (248), Expect = 5e-21
Identities = 60/134 (44%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 140 PSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
P PG PP G PG GL GP+GP G+ G G G G G G PG G KG
Sbjct: 111 PKTSPGCNCPPAPQGSPGDAGLS-IIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKG 169
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDV-----SNDVLLAGAKGDQGPPGPPGP---PGPPG 248
D G G G GP GQKGEKG G+ + + G G GPPGP GP PG PG
Sbjct: 170 DMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 229
Query: 249 PPGPPGSRRAKGPR 262
P GPPG GP+
Sbjct: 230 PMGPPGLPGPPGPK 243
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 315 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 374
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 375 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 432
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 433 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 490
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 491 KGEAGEKGNPGAE 503
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 482 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 541
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 542 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 594
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 595 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 641
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 341 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 400
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 401 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 453
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 454 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 511
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 571 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 624
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 625 KGDKGDQGAPGLDAPCPLGEDGLPVQ 650
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 211 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 270
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 271 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 328
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 329 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 364
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 403 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 462
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 463 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 518
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 519 PGPPGLQGVPGPKGEAGLDG 538
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 512 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 571
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 572 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 624
Query: 257 RAKGPR 262
++GP+
Sbjct: 625 GSRGPK 630
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 279 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 338
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 339 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 398
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 399 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 445
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 320 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 379
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 380 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 437
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 438 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 495
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 496 KGEAGEKGNPGAE 508
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 487 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 546
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 547 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 599
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 600 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 646
Score = 91.3 bits (225), Expect = 2e-18
Identities = 57/157 (36%), Positives = 67/157 (42%), Gaps = 38/157 (24%)
Query: 140 PSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
P PG PP G PG G G PGP G G+ G G +G MG+ G G PG +G+KG
Sbjct: 111 PKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKG 170
Query: 197 DHGELG-------------------------LQGN------EGPPGQKGEKGDKGDVSND 225
+ G+ G QG +GPPG G G G + +
Sbjct: 171 EKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGH- 229
Query: 226 VLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 230 ---PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 263
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 346 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 405
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 406 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 458
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 459 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 516
Score = 73.9 bits (180), Expect = 3e-13
Identities = 50/130 (38%), Positives = 53/130 (40%), Gaps = 33/130 (25%)
Query: 165 QGPKGEKGANGKRGKMGIPGAA------------GNPGERGEKGDHGELGLQGNEGPPGQ 212
+ PK G N G PG G PG G KGD G G G GP GQ
Sbjct: 109 EAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQ 168
Query: 213 KGEKGDKGD-------VSNDVLLA--------------GAKGDQGPPGPPGPPGPPGPPG 251
KGEKG G+ + N V LA QGPPGPPGPPGP GP G
Sbjct: 169 KGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLG 228
Query: 252 PPGSRRAKGP 261
PG GP
Sbjct: 229 HPGLPGPMGP 238
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 576 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 629
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 630 KGDKGDQGAPGLDAPCPLGEDGLPVQ 655
Score = 37.4 bits (85), Expect = 0.036
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 19/69 (27%)
Query: 209 PPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGP------PGPPGPPGSRRAKGPR 262
PP +G+ G +G G G G G PG PGP GPPG PG + KG +
Sbjct: 120 PPVFQGQPGTRG-------FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEK 172
Query: 263 QPSMFNGQC 271
GQC
Sbjct: 173 ------GQC 175
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 215 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 274
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 275 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 332
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 333 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 368
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 407 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 466
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 467 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 522
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 523 PGPPGLQGVPGPKGEAGLDG 542
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 516 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 575
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 576 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 628
Query: 257 RAKGPR 262
++GP+
Sbjct: 629 GSRGPK 634
Score = 113 bits (282), Expect = 5e-25
Identities = 60/135 (44%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNG---LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG G LDG+PG GPKG+ G G G+ G G G G
Sbjct: 140 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 199
Query: 191 ERGE---KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+ GE +G+ + +QG GPPG G G G G G GPPG PGPPGP
Sbjct: 200 QCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPK 252
Query: 248 GPPGPPGSRRAKGPR 262
G PG G KG R
Sbjct: 253 GDPGIQGYHGRKGER 267
Score = 105 bits (261), Expect = 1e-22
Identities = 61/135 (45%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 136 CLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
C GP G PG G PG GL GP+GP G+ G G G G G G PG G K
Sbjct: 119 CPPAFQGPTGRPGLPGSPGDAGLS-IIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPK 177
Query: 196 GDHGELGLQGNEGPPGQKGEKGDKGDV-----SNDVLLAGAKGDQGPPGPPGP---PGPP 247
GD G G G GP GQKGEKG G+ + + G G GPPGP GP PG P
Sbjct: 178 GDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 237
Query: 248 GPPGPPGSRRAKGPR 262
GP GPPG GP+
Sbjct: 238 GPMGPPGLPGPPGPK 252
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 283 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 342
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 343 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 402
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 403 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 449
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 324 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 383
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 384 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 441
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 442 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 499
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 500 KGEAGEKGNPGAE 512
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 491 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 550
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 551 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 603
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 604 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 650
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 350 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 409
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 410 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 462
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 463 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 520
Score = 67.8 bits (164), Expect = 2e-11
Identities = 46/136 (33%), Positives = 52/136 (38%), Gaps = 44/136 (32%)
Query: 143 PPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELG 202
P PG P G G+PG G G+ G + +G G G PG RG G G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGSPGDAGLS----IIGPRGPPGQPGTRGFPGFPGPIG 166
Query: 203 LQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGP------------------- 243
L G G PG KG+ G G PPG PGP
Sbjct: 167 LDGKPGHPGPKGDMGLTG----------------PPGQPGPQGQKGEKGQCGEYPHRGEQ 210
Query: 244 -----PGPPGPPGPPG 254
GPPGPPGPPG
Sbjct: 211 SQASIQGPPGPPGPPG 226
Score = 62.0 bits (149), Expect = 1e-09
Identities = 40/105 (38%), Positives = 47/105 (44%), Gaps = 23/105 (21%)
Query: 165 QGPKGEKGAN---GKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGD 221
+ PK G N +G G PG G+PG+ G L + G GPPGQ G +G G
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGSPGDAG-------LSIIGPRGPPGQPGTRGFPG- 160
Query: 222 VSNDVLLAGAKGDQGPPGPPGP------PGPPGPPGPPGSRRAKG 260
G G G PG PGP GPPG PGP G + KG
Sbjct: 161 ------FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 199
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 580 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 633
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 634 KGDKGDQGAPGLDAPCPLGEDGLPVQ 659
>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
Length = 690
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 327
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 328 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 385
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 386 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 421
Score = 122 bits (307), Expect = 7e-28
Identities = 66/131 (50%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 460 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 519
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G G GE G+ G PG+KGEKG+ G + V G G +GPPGPPG G PGP G
Sbjct: 520 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPV--PGLPGPEGPPGPPGLQGVPGPKG 574
Query: 252 PPGSRRAKGPR 262
G AKG +
Sbjct: 575 EAGLDGAKGEK 585
Score = 109 bits (272), Expect = 7e-24
Identities = 62/150 (41%), Positives = 72/150 (48%), Gaps = 33/150 (22%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
GP GP GPPG G PG G +G PG G KGEKG G+
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQG 568
Query: 177 ----RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAK 232
+G+ G+ GA G G +GEKGD G LGL G GP G G G KG+ G+K
Sbjct: 569 VPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGE-------RGSK 621
Query: 233 GDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GD G GP G G PG GPPG + +G R
Sbjct: 622 GDPGMTGPTGAAGLPGLHGPPGDKGNRGER 651
Score = 103 bits (258), Expect = 3e-22
Identities = 62/134 (46%), Positives = 72/134 (53%), Gaps = 21/134 (15%)
Query: 137 LTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGAN------GKRGKMGIPGAAG 187
L GP GPPGPPG G+P G GLDG G +G +GEKG G G +G+PG AG
Sbjct: 554 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAG 613
Query: 188 NPGERGEKGD------HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
GERG KGD G GL G GPPG KG +G++G + G KGD+G G P
Sbjct: 614 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS----RGPKGDKGDQGAP 669
Query: 242 G--PPGPPGPPGPP 253
G P P G G P
Sbjct: 670 GLDAPCPLGEDGLP 683
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 336 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 395
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 396 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 455
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 456 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 502
Score = 99.0 bits (245), Expect = 1e-20
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 377 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 436
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 437 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 494
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
G++GP G PG GPPGP GPPG G + + G PGE
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGE 537
Score = 97.1 bits (240), Expect = 4e-20
Identities = 65/169 (38%), Positives = 70/169 (41%), Gaps = 45/169 (26%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD--------------------------VSNDV 226
G KGD G G G GP GQKGEKG G+ + N V
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSV 246
Query: 227 LLA--------------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
LA QGPPGPPGPPGP GP G PG GP
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 295
Score = 97.1 bits (240), Expect = 4e-20
Identities = 60/176 (34%), Positives = 70/176 (39%), Gaps = 54/176 (30%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE--------------------------------------------KGDHGELGLQGN 206
+ GE +G+ + +QG
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGP 271
Query: 207 EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GPPG G G G G G GPPG PGPPGP G PG G KG R
Sbjct: 272 PGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 320
Score = 96.7 bits (239), Expect = 5e-20
Identities = 60/150 (40%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 403 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 462
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G PPG GEKG +G G G G
Sbjct: 463 MGPPGLPGQIGPPGAPGIPGQKGEIGLPG---PPGHDGEKGPRGK-------PGDMGPPG 512
Query: 237 PPGPPGPPGPP------GPPGPPGSRRAKG 260
P GPPG GPP G PG PG + KG
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKG 542
Score = 94.7 bits (234), Expect = 2e-19
Identities = 69/201 (34%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 366 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 422
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------------------------LA 229
G+ G G +G++G PG KGE D N+ L +
Sbjct: 423 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 481
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKAD 289
G KG+ G PGPPG G GP G PG GP+ P +G PG + ++ G
Sbjct: 482 GQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGP-PG----VKGENGHPGSPG 536
Query: 290 EKASEHHSPQAESMITSIGNP 310
EK + + QA S + + P
Sbjct: 537 EKGEKGETGQAGSPVPGLPGP 557
Score = 79.3 bits (194), Expect = 8e-15
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK 216
G + P QGP G G G +G +G+PG G+PG+ G L + G GPPGQ G +
Sbjct: 116 GCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAG-------LSIIGPRGPPGQPGTR 168
Query: 217 GDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G G + L G G GP G G GPPG PGP G + KG
Sbjct: 169 GFPG-FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
Length = 691
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 327
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 328 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 385
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 386 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 421
Score = 117 bits (292), Expect = 4e-26
Identities = 70/164 (42%), Positives = 80/164 (48%), Gaps = 38/164 (23%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 460 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 519
Query: 192 ------------RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL------------ 227
G G+ GE G G G PG+KGE G+KG+ + L
Sbjct: 520 DGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEAGL 579
Query: 228 --------LAGAKGDQGP---PGPPGPPGPPGPPGPPGSRRAKG 260
G KGD+GP PG PGP G PGP GP G R +KG
Sbjct: 580 DGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKG 623
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 336 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 395
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 396 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 455
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 456 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 502
Score = 100 bits (249), Expect = 3e-21
Identities = 74/195 (37%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 377 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 436
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 437 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 494
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 552
Query: 291 K--ASEHHSPQAESM 303
K A E +P AE +
Sbjct: 553 KGEAGEKGNPGAEGL 567
Score = 97.1 bits (240), Expect = 4e-20
Identities = 65/169 (38%), Positives = 70/169 (41%), Gaps = 45/169 (26%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD--------------------------VSNDV 226
G KGD G G G GP GQKGEKG G+ + N V
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSV 246
Query: 227 LLA--------------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
LA QGPPGPPGPPGP GP G PG GP
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 295
Score = 97.1 bits (240), Expect = 4e-20
Identities = 60/176 (34%), Positives = 70/176 (39%), Gaps = 54/176 (30%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE--------------------------------------------KGDHGELGLQGN 206
+ GE +G+ + +QG
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGP 271
Query: 207 EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GPPG G G G G G GPPG PGPPGP G PG G KG R
Sbjct: 272 PGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 320
Score = 93.2 bits (230), Expect = 6e-19
Identities = 54/123 (43%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGD- 197
G G PGP G GL G G G G +G +G G G G +G+PG AG GERG KGD
Sbjct: 566 GLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDP 625
Query: 198 -----HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPG--PPGPPGPP 250
G GL G GPPG KG +G++G + G KGD+G G PG P P G
Sbjct: 626 GMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS----RGPKGDKGDQGAPGLDAPCPLGED 681
Query: 251 GPP 253
G P
Sbjct: 682 GLP 684
Score = 79.3 bits (194), Expect = 8e-15
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK 216
G + P QGP G G G +G +G+PG G+PG+ G L + G GPPGQ G +
Sbjct: 116 GCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAG-------LSIIGPRGPPGQPGTR 168
Query: 217 GDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G G + L G G GP G G GPPG PGP G + KG
Sbjct: 169 GFPG-FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Score = 66.6 bits (161), Expect = 6e-11
Identities = 35/75 (46%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G GP G PG G G G G PG GP G G G G PG GN GERG+KG
Sbjct: 600 LPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGP---PGDKGNRGERGKKG 656
Query: 197 DHGELGLQGNEGPPG 211
G G +G++G PG
Sbjct: 657 SRGPKGDKGDQGAPG 671
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 607 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 660
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 661 KGDKGDQGAPGLDAPCPLGEDGLPVQ 686
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 249 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 308
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 309 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 366
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 367 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 402
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 441 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 500
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 501 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 556
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 557 PGPPGLQGVPGPKGEAGLDG 576
Score = 113 bits (283), Expect = 4e-25
Identities = 64/133 (48%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGN--------PG 190
GP GP GPPG G PG G +G PG G KGEKG G+ G G G AG PG
Sbjct: 490 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPG 549
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGP---P 247
G +G G GLQG GP G+ G G KG+ G KGD+GP G PG PGP P
Sbjct: 550 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKG----FQGEKGDRGPLGLPGTPGPIGVP 605
Query: 248 GPPGPPGSRRAKG 260
GP GP G R +KG
Sbjct: 606 GPAGPKGERGSKG 618
Score = 105 bits (262), Expect = 1e-22
Identities = 58/130 (44%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 525 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGP 252
GEKGD G LGL G GP G G G KG+ G+KGD G GP G G PG GP
Sbjct: 585 GEKGDRGPLGLPGTPGPIGVPGPAGPKGE-------RGSKGDPGMTGPTGAAGLPGLHGP 637
Query: 253 PGSRRAKGPR 262
PG + +G R
Sbjct: 638 PGDKGNRGER 647
Score = 104 bits (259), Expect = 2e-22
Identities = 60/157 (38%), Positives = 70/157 (44%), Gaps = 35/157 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE-------------------------KGDHGELGLQGNEGPPGQKGEKGDKGDVSND 225
+ GE +G+ + +QG GPPG G G G
Sbjct: 212 QCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGH---- 267
Query: 226 VLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 268 ---PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 301
Score = 103 bits (258), Expect = 3e-22
Identities = 66/152 (43%), Positives = 72/152 (47%), Gaps = 29/152 (19%)
Query: 139 GPSGPPGPP---GAGGLPGHNGLDGQP-----GPQGPKGEKGANGKRGKMGIPGAAGNPG 190
GP+G PG P GA G+PG G G GP+GP G+ G G G G G G PG
Sbjct: 125 GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPG 184
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGD-------VSNDVLLA-------------- 229
G KGD G G G GP GQKGEKG G+ + N V LA
Sbjct: 185 HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQ 244
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 245 SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 276
Score = 103 bits (258), Expect = 3e-22
Identities = 62/134 (46%), Positives = 72/134 (53%), Gaps = 21/134 (15%)
Query: 137 LTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGAN------GKRGKMGIPGAAG 187
L GP GPPGPPG G+P G GLDG G +G +GEKG G G +G+PG AG
Sbjct: 550 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAG 609
Query: 188 NPGERGEKGD------HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
GERG KGD G GL G GPPG KG +G++G + G KGD+G G P
Sbjct: 610 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS----RGPKGDKGDQGAP 665
Query: 242 G--PPGPPGPPGPP 253
G P P G G P
Sbjct: 666 GLDAPCPLGEDGLP 679
Score = 103 bits (257), Expect = 4e-22
Identities = 64/150 (42%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD-------VSNDVLLA-----------GAKGD 234
G KGD G G G GP GQKGEKG G+ + N V LA G +
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQ 246
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGPPGPPGP GP G GP P
Sbjct: 247 ASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 276
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 317 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 376
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 377 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 436
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 437 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 483
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 358 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 417
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 418 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 475
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 476 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 533
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 534 KGEAGEKGNPGAE 546
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 384 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 443
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 444 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 496
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 497 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 554
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 227 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 286
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 287 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 344
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 345 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 380
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 419 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 478
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 479 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 534
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 535 PGPPGLQGVPGPKGEAGLDG 554
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 528 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 587
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 588 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 640
Query: 257 RAKGPR 262
++GP+
Sbjct: 641 GSRGPK 646
Score = 113 bits (282), Expect = 5e-25
Identities = 60/135 (44%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNG---LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG G LDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE---KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPP 247
+ GE +G+ + +QG GPPG G G G G G GPPG PGPPGP
Sbjct: 212 QCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPK 264
Query: 248 GPPGPPGSRRAKGPR 262
G PG G KG R
Sbjct: 265 GDPGIQGYHGRKGER 279
Score = 108 bits (271), Expect = 1e-23
Identities = 64/140 (45%), Positives = 73/140 (52%), Gaps = 16/140 (11%)
Query: 139 GPSGPPGPP---GAGGLPGHNGLDGQP-----GPQGPKGEKGANGKRGKMGIPGAAGNPG 190
GP+G PG P GA G+PG G G GP+GP G+ G G G G G G PG
Sbjct: 125 GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPG 184
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSN--DVLLAGAKGDQGPPGPPGPPGP-- 246
G KGD G G G GP GQKGEKG G+ + + A +G GPPGPPGP GP
Sbjct: 185 HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLG 244
Query: 247 ----PGPPGPPGSRRAKGPR 262
PGP GPPG GP+
Sbjct: 245 HPGLPGPMGPPGLPGPPGPK 264
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 295 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 354
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 355 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 414
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 415 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 461
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 336 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 395
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 396 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 453
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 454 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 511
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 512 KGEAGEKGNPGAE 524
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 503 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 562
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 563 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 615
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 616 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 662
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 362 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 421
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 422 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 474
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 475 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 532
Score = 74.3 bits (181), Expect = 3e-13
Identities = 43/99 (43%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 162 PGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGD 221
PG P +G G+ G G GA G PG G GD G L + G GPPGQ G +G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAG-LSIIGPRGPPGQPGTRGFPG- 172
Query: 222 VSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
+ L G G GP G G GPPG PGP G + KG
Sbjct: 173 FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 592 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 645
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 646 KGDKGDQGAPGLDAPCPLGEDGLPVQ 671
>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
Length = 688
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 239 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 298
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 299 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 356
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 357 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 392
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 431 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 490
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 491 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 546
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 547 PGPPGLQGVPGPKGEAGLDG 566
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 540 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 599
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 600 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 652
Query: 257 RAKGPR 262
++GP+
Sbjct: 653 GSRGPK 658
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 307 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 366
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 367 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 426
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 427 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 473
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 348 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 407
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 408 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 465
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 466 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 523
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 524 KGEAGEKGNPGAE 536
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 515 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 574
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 575 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 627
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 628 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 674
Score = 90.5 bits (223), Expect = 4e-18
Identities = 58/177 (32%), Positives = 68/177 (38%), Gaps = 54/177 (30%)
Query: 136 CLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEK 195
C GP G PG G PG G G PGP G G+ G G +G MG+ G G PG +G+K
Sbjct: 119 CPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 178
Query: 196 GDHGELG--------------------------------------------LQGN----- 206
G+ G+ G QG
Sbjct: 179 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 238
Query: 207 -EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
+GPPG G G G + + G G GPPG PGPPGP G PG G KG R
Sbjct: 239 IQGPPGPPGPPGPSGPLGH----PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 291
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 374 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 433
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 434 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 486
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 487 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 544
Score = 84.0 bits (206), Expect = 3e-16
Identities = 57/159 (35%), Positives = 64/159 (40%), Gaps = 43/159 (27%)
Query: 143 PPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELG 202
P PG P G G+PG G G +G G G +G+ G G+P G KGD G G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHP---GPKGDMGLTG 167
Query: 203 LQGNEGPPGQKGEKGDKGD--------------------------VSNDVLLA------- 229
G GP GQKGEKG G+ + N V LA
Sbjct: 168 PPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKR 227
Query: 230 -------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 228 RTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 266
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 604 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 657
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 658 KGDKGDQGAPGLDAPCPLGEDGLPVQ 683
Score = 55.5 bits (132), Expect = 1e-07
Identities = 36/93 (38%), Positives = 40/93 (43%), Gaps = 19/93 (20%)
Query: 165 QGPKGEKGAN---GKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGD 221
+ PK G N +G G PG G PG RG G G +GL +G PG G KGD G
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGL---DGKPGHPGPKGDMGL 165
Query: 222 VSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPG 254
GPPG PGP G G G G
Sbjct: 166 T-------------GPPGQPGPQGQKGEKGQCG 185
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 327
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 328 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 385
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 386 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 421
Score = 115 bits (289), Expect = 8e-26
Identities = 73/177 (41%), Positives = 84/177 (47%), Gaps = 52/177 (29%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIP-------- 183
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG P
Sbjct: 460 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 519
Query: 184 -------------------------GAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--- 215
G AG+PGE+GE G+ G G +G +G PG KGE
Sbjct: 520 DGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEAGL 579
Query: 216 ---------KGDKGDVSNDVLLAGAKGDQGPPGPPGPPGP---PGPPGPPGSRRAKG 260
+G+KGD + L GA G G PGPPG PGP PGP GP G R +KG
Sbjct: 580 DGAKGEKGFQGEKGD-RGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKG 635
Score = 102 bits (253), Expect = 1e-21
Identities = 69/188 (36%), Positives = 76/188 (40%), Gaps = 54/188 (28%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
GP GP GPPG G PG G +G PG G KGEKG G+
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568
Query: 177 -----RGKMGIPGAAGNPGERGEKGDHGELGLQGNEG------------------PPGQK 213
+G+ G+ GA G G +GEKGD G LGL G G P G K
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPK 628
Query: 214 GEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--C 271
GE+G KGD G G G G PG GPPG G G R KG R P G
Sbjct: 629 GERGSKGD-------PGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 681
Query: 272 PGETCAIP 279
PG P
Sbjct: 682 PGLDAPCP 689
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 336 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 395
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 396 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 455
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 456 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 502
Score = 100 bits (249), Expect = 3e-21
Identities = 74/195 (37%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 377 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 436
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 437 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 494
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 552
Query: 291 K--ASEHHSPQAESM 303
K A E +P AE +
Sbjct: 553 KGEAGEKGNPGAEGL 567
Score = 97.1 bits (240), Expect = 4e-20
Identities = 65/169 (38%), Positives = 70/169 (41%), Gaps = 45/169 (26%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD--------------------------VSNDV 226
G KGD G G G GP GQKGEKG G+ + N V
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSV 246
Query: 227 LLA--------------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
LA QGPPGPPGPPGP GP G PG GP
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 295
Score = 97.1 bits (240), Expect = 4e-20
Identities = 60/176 (34%), Positives = 70/176 (39%), Gaps = 54/176 (30%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE--------------------------------------------KGDHGELGLQGN 206
+ GE +G+ + +QG
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGP 271
Query: 207 EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GPPG G G G G G GPPG PGPPGP G PG G KG R
Sbjct: 272 PGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 320
Score = 90.9 bits (224), Expect = 3e-18
Identities = 55/134 (41%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGK---------MGIPGAAG 187
L G GP G G G G G G+ G +GP G GA+G G+ +G+PG AG
Sbjct: 567 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG 626
Query: 188 NPGERGEKGD------HGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPP 241
GERG KGD G GL G GPPG KG +G++G + G KGD+G G P
Sbjct: 627 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS----RGPKGDKGDQGAP 682
Query: 242 G--PPGPPGPPGPP 253
G P P G G P
Sbjct: 683 GLDAPCPLGEDGLP 696
Score = 79.3 bits (194), Expect = 8e-15
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK 216
G + P QGP G G G +G +G+PG G+PG+ G L + G GPPGQ G +
Sbjct: 116 GCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAG-------LSIIGPRGPPGQPGTR 168
Query: 217 GDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G G + L G G GP G G GPPG PGP G + KG
Sbjct: 169 GFPG-FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 619 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 672
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 673 KGDKGDQGAPGLDAPCPLGEDGLPVQ 698
>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
Length = 702
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 327
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 328 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 385
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 386 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 421
Score = 122 bits (307), Expect = 7e-28
Identities = 66/131 (50%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 460 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 519
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPG 251
G G GE G+ G PG+KGEKG+ G + V G G +GPPGPPG G PGP G
Sbjct: 520 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPV--PGLPGPEGPPGPPGLQGVPGPKG 574
Query: 252 PPGSRRAKGPR 262
G AKG +
Sbjct: 575 EAGLDGAKGEK 585
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 554 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 613
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 614 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 666
Query: 257 RAKGPR 262
++GP+
Sbjct: 667 GSRGPK 672
Score = 102 bits (254), Expect = 9e-22
Identities = 69/187 (36%), Positives = 76/187 (40%), Gaps = 53/187 (28%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
GP GP GPPG G PG G +G PG G KGEKG G+
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQG 568
Query: 177 ----RGKMGIPGAAGNPGERGEKGDHGELGLQGNE------------------GPPGQKG 214
+G+ G+ GA G G +GEKGD G LGL G GP G KG
Sbjct: 569 VPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKG 628
Query: 215 EKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CP 272
E+G KGD G G G G PG GPPG G G R KG R P G P
Sbjct: 629 ERGSKGD-------PGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAP 681
Query: 273 GETCAIP 279
G P
Sbjct: 682 GLDAPCP 688
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 336 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 395
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 396 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 455
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 456 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 502
Score = 99.0 bits (245), Expect = 1e-20
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 377 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 436
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 437 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 494
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGE 274
G++GP G PG GPPGP GPPG G + + G PGE
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGE 537
Score = 97.1 bits (240), Expect = 4e-20
Identities = 65/169 (38%), Positives = 70/169 (41%), Gaps = 45/169 (26%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD--------------------------VSNDV 226
G KGD G G G GP GQKGEKG G+ + N V
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSV 246
Query: 227 LLA--------------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
LA QGPPGPPGPPGP GP G PG GP
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 295
Score = 97.1 bits (240), Expect = 4e-20
Identities = 60/176 (34%), Positives = 70/176 (39%), Gaps = 54/176 (30%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE--------------------------------------------KGDHGELGLQGN 206
+ GE +G+ + +QG
Sbjct: 212 QCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGP 271
Query: 207 EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
GPPG G G G G G GPPG PGPPGP G PG G KG R
Sbjct: 272 PGPPGPPGPSGPLGH-------PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 320
Score = 96.7 bits (239), Expect = 5e-20
Identities = 60/150 (40%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 403 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 462
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G PPG GEKG +G G G G
Sbjct: 463 MGPPGLPGQIGPPGAPGIPGQKGEIGLPG---PPGHDGEKGPRGK-------PGDMGPPG 512
Query: 237 PPGPPGPPGPP------GPPGPPGSRRAKG 260
P GPPG GPP G PG PG + KG
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKG 542
Score = 94.7 bits (234), Expect = 2e-19
Identities = 69/201 (34%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 137 LTGPSGPPGPPG--AGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGE 194
L G G G G GG G G G PGP GPKGE G + G++G PG G+ GERG
Sbjct: 366 LLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD---GQVGPPGQPGDKGERGA 422
Query: 195 KGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVL-------------------------LA 229
G+ G G +G++G PG KGE D N+ L +
Sbjct: 423 AGEQGPDGPKGSKGEPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIP 481
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKAD 289
G KG+ G PGPPG G GP G PG GP+ P +G PG + ++ G
Sbjct: 482 GQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGP-PG----VKGENGHPGSPG 536
Query: 290 EKASEHHSPQAESMITSIGNP 310
EK + + QA S + + P
Sbjct: 537 EKGEKGETGQAGSPVPGLPGP 557
Score = 79.3 bits (194), Expect = 8e-15
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK 216
G + P QGP G G G +G +G+PG G+PG+ G L + G GPPGQ G +
Sbjct: 116 GCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAG-------LSIIGPRGPPGQPGTR 168
Query: 217 GDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G G + L G G GP G G GPPG PGP G + KG
Sbjct: 169 GFPG-FPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 618 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 671
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 672 KGDKGDQGAPGLDAPCPLGEDGLPVQ 697
>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
Length = 698
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 249 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 308
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 309 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 366
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 367 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 402
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 441 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 500
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 501 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 556
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 557 PGPPGLQGVPGPKGEAGLDG 576
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 550 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 609
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 610 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 662
Query: 257 RAKGPR 262
++GP+
Sbjct: 663 GSRGPK 668
Score = 104 bits (259), Expect = 2e-22
Identities = 60/157 (38%), Positives = 70/157 (44%), Gaps = 35/157 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHN---GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPG 190
G+ + GP GPPG PG G PG GLDG+PG GPKG+ G G G+ G G G G
Sbjct: 152 GLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKG 211
Query: 191 ERGE-------------------------KGDHGELGLQGNEGPPGQKGEKGDKGDVSND 225
+ GE +G+ + +QG GPPG G G G
Sbjct: 212 QCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGH---- 267
Query: 226 VLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
G G GPPG PGPPGP G PG G KG R
Sbjct: 268 ---PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 301
Score = 103 bits (258), Expect = 3e-22
Identities = 66/152 (43%), Positives = 72/152 (47%), Gaps = 29/152 (19%)
Query: 139 GPSGPPGPP---GAGGLPGHNGLDGQP-----GPQGPKGEKGANGKRGKMGIPGAAGNPG 190
GP+G PG P GA G+PG G G GP+GP G+ G G G G G G PG
Sbjct: 125 GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPG 184
Query: 191 ERGEKGDHGELGLQGNEGPPGQKGEKGDKGD-------VSNDVLLA-------------- 229
G KGD G G G GP GQKGEKG G+ + N V LA
Sbjct: 185 HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQ 244
Query: 230 GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 245 SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 276
Score = 103 bits (257), Expect = 4e-22
Identities = 64/150 (42%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 138 TGPSGPPGPPGAGGLPGHNGLDGQPG-----PQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG G PG GA G+PG G G G P+GP G+ G G G G G G PG
Sbjct: 127 TGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 186
Query: 193 GEKGDHGELGLQGNEGPPGQKGEKGDKGD-------VSNDVLLA-----------GAKGD 234
G KGD G G G GP GQKGEKG G+ + N V LA G +
Sbjct: 187 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQ 246
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQP 264
GPPGPPGPPGP GP G GP P
Sbjct: 247 ASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 276
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 317 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 376
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 377 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 436
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 437 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 483
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 358 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 417
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 418 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 475
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 476 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 533
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 534 KGEAGEKGNPGAE 546
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 525 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 585 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 637
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 638 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 684
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 384 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 443
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 444 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 496
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 497 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 554
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 614 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 667
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 668 KGDKGDQGAPGLDAPCPLGEDGLPVQ 693
>gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]
Length = 700
Score = 122 bits (307), Expect = 7e-28
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQ------PGPQGPKGE---KGANGKRGKMGIPG--- 184
+ GP GPPGPPG G GH GL G PGP GPKG+ +G +G++G+ G+PG
Sbjct: 251 IQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPG 310
Query: 185 -----------AAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKG 233
AG GE G G GE G +G+ G PG G+KG+KGD N + G +G
Sbjct: 311 KHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSI--GGGRG 368
Query: 234 DQGPPGPPGPPGPP---------GPPGPPGSRRAKG 260
+ GPPG PGPPGP GPPG PG + +G
Sbjct: 369 EPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG 404
Score = 122 bits (306), Expect = 9e-28
Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 135 ICLTGPSGPPG---PPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
+ L GP G PG PPGA G+PG G G PGP G GEKG GK G MG PG G PG+
Sbjct: 443 LALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGK 502
Query: 192 RGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGP--PGPPGPPGP 249
G G GE G+ G PG+KGEKG+ G + G G++G PG PG PGP GP
Sbjct: 503 DGPPGVKGE---NGHPGSPGEKGEKGETGQAGSPG-EKGEAGEKGNPGAEVPGLPGPEGP 558
Query: 250 PGPPGSRRAKGPRQPSMFNG 269
PGPPG + GP+ + +G
Sbjct: 559 PGPPGLQGVPGPKGEAGLDG 578
Score = 113 bits (283), Expect = 4e-25
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L GP GPPGPPG G+PG G G G +G KG +G G RG +G+PGA+G G G G
Sbjct: 552 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 611
Query: 197 DHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSR 256
G +G+ G GP G++G KGD G + G G G PG GPPG G G G +
Sbjct: 612 TPGPIGVPGPAGPKGERGSKGDPG-------MTGPTGAAGLPGLHGPPGDKGNRGERGKK 664
Query: 257 RAKGPR 262
++GP+
Sbjct: 665 GSRGPK 670
Score = 100 bits (250), Expect = 3e-21
Identities = 64/167 (38%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 134 GICLTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEK--------------------GA 173
GI + G G PG PG G G G G PG G KGEK G
Sbjct: 319 GIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGP 378
Query: 174 NGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGE--KGDKGDVSNDV----- 226
G +G+ G+ G G PG+ G+KG+ G G QG +GP G KGE KG+ D + ++
Sbjct: 379 PGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ 438
Query: 227 -----LLAGAKGDQGPPGPPGPPGPPGP------PGPPGSRRAKGPR 262
L G G G GPPG PG PG PGPPG KGPR
Sbjct: 439 EIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPR 485
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 134 GICLTGPSGPPGPPGAGGLP---GHNGLDGQ---PGPQGPKGEKGANGKRGKMGIPGAAG 187
G + G G PGPPG G P G G+DGQ PG G KGE+GA G++G G G+ G
Sbjct: 360 GNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKG 419
Query: 188 NPGERGEKGDH-----------------GELGLQGNEGPPGQKGEKGDKGDVSNDVLLAG 230
PG +GE D+ G GL G GPPG G G KG++ G
Sbjct: 420 EPG-KGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPG-PPG 477
Query: 231 AKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDDTLVGKADE 290
G++GP G PG GPPGP GPPG G + + G PGE + G E
Sbjct: 478 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS-PGEK-GEKGETGQAGSPGE 535
Query: 291 K--ASEHHSPQAE 301
K A E +P AE
Sbjct: 536 KGEAGEKGNPGAE 548
Score = 98.6 bits (244), Expect = 1e-20
Identities = 65/167 (38%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 138 TGPSGPPGPPGAGGLPGHNG-----LDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGER 192
TG +G PG G G G+ G L G GP GP G +G G +G+ G+ GA G G +
Sbjct: 527 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 586
Query: 193 GEKGDHGELGLQGNE------------------GPPGQKGEKGDKGDVSNDVLLAGAKGD 234
GEKGD G LGL G GP G KGE+G KGD G G
Sbjct: 587 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD-------PGMTGP 639
Query: 235 QGPPGPPGPPGPPGPPGPPGSRRAKGPRQPSMFNGQ--CPGETCAIP 279
G G PG GPPG G G R KG R P G PG P
Sbjct: 640 TGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCP 686
Score = 92.0 bits (227), Expect = 1e-18
Identities = 61/162 (37%), Positives = 67/162 (41%), Gaps = 43/162 (26%)
Query: 140 PSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHG 199
P GP G GLPG G G PG G G +G G G +G+ G G+P G KGD G
Sbjct: 120 PPAFQGPTGRPGLPGDKGAIGMPGRVGQPGTRGFPGFPGPIGLDGKPGHP---GPKGDMG 176
Query: 200 ELGLQGNEGPPGQKGEKGDKGD--------------------------VSNDVLLA---- 229
G G GP GQKGEKG G+ + N V LA
Sbjct: 177 LTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPV 236
Query: 230 ----------GAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGP 261
QGPPGPPGPPGP GP G PG GP
Sbjct: 237 IKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP 278
Score = 89.7 bits (221), Expect = 6e-18
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 139 GPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGK---------------------- 176
G G GPPG G G G G+ GP GPKG KG GK
Sbjct: 386 GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLAL 445
Query: 177 RGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEKGDKGDVSNDVLLAGAKGDQG 236
G G+PG G PG G G GE+GL G G G+KG +G GD+ G G QG
Sbjct: 446 MGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDM-------GPPGPQG 498
Query: 237 PPGP------------PGPPGPPGPPGPPGSRRAKGPRQPSMFNGQCPGETCAIPNDD 282
PPG PG PG G G G + G + + G E +P +
Sbjct: 499 PPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPE 556
Score = 89.0 bits (219), Expect = 1e-17
Identities = 58/176 (32%), Positives = 68/176 (38%), Gaps = 54/176 (30%)
Query: 137 LTGPSGPPGPPGAGGLPGHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKG 196
L G G G PG G PG G G PGP G G+ G G +G MG+ G G PG +G+KG
Sbjct: 132 LPGDKGAIGMPGRVGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKG 191
Query: 197 DHGELG--------------------------------------------LQGN------ 206
+ G+ G QG
Sbjct: 192 EKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASI 251
Query: 207 EGPPGQKGEKGDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKGPR 262
+GPPG G G G + + G G GPPG PGPPGP G PG G KG R
Sbjct: 252 QGPPGPPGPPGPSGPLGH----PGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGER 303
Score = 67.8 bits (164), Expect = 2e-11
Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 25/104 (24%)
Query: 157 GLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGERGEKGDHGELGLQGNEGPPGQKGEK 216
G + P QGP G G G +G +G+PG G PG RG G G +GL G G PG KG+
Sbjct: 116 GCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGQPGTRGFPGFPGPIGLDGKPGHPGPKGDM 175
Query: 217 GDKGDVSNDVLLAGAKGDQGPPGPPGPPGPPGPPGPPGSRRAKG 260
G GPPG PGP G + KG
Sbjct: 176 -------------------------GLTGPPGQPGPQGQKGEKG 194
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 135 ICLTGPSGPPGPPGAGGLP---GHNGLDGQPGPQGPKGEKGANGKRGKMGIPGAAGNPGE 191
I + GP+GP G G+ G P G G G PG GP G+KG G+RGK G+ G
Sbjct: 616 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK------KGSRGP 669
Query: 192 RGEKGDHGELGLQ-----GNEGPPGQ 212
+G+KGD G GL G +G P Q
Sbjct: 670 KGDKGDQGAPGLDAPCPLGEDGLPVQ 695
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,242,423
Number of Sequences: 37866
Number of extensions: 1777618
Number of successful extensions: 71280
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 714
Number of HSP's that attempted gapping in prelim test: 13347
Number of HSP's gapped (non-prelim): 11173
length of query: 551
length of database: 18,247,518
effective HSP length: 107
effective length of query: 444
effective length of database: 14,195,856
effective search space: 6302960064
effective search space used: 6302960064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.