Guide to the Human Genome
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Name: CRCT1 Sequence: fasta or formatted (99aa) NCBI GI: 9506923
Description:

cysteine-rich C-terminal 1

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          7           1
 C cysteine           17.2         17           4
 D aspartate           1.0          1           1
 E glutamate           0.0          0           0
 F phenylalanine       2.0          2           1
 G glycine            15.2         15           3
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              2.0          2           1
 L leucine             0.0          0           0
 M methionine          1.0          1           1
 N asparagine          2.0          2           2
 P proline             8.1          8           1
 Q glutamine           6.1          6           2
 R arginine           10.1         10           5
 S serine             25.3         25           4
 T threonine           2.0          2           1
 V valine              1.0          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich C-terminal 1 
LCE1C                 0.228   late cornified envelope 1C 
LCE1F                 0.213   late cornified envelope 1F 
LCE1B                 0.208   late cornified envelope 1B 
LOC100292632          0.203   PREDICTED: hypothetical protein 
LCE1E                 0.203   late cornified envelope 1E 
LCE1D                 0.203   late cornified envelope 1D 
LCE1A                 0.198   late cornified envelope 1A 
LCE5A                 0.188   late cornified envelope 5A 
LCE2A                 0.173   late cornified envelope 2A 
LCE2D                 0.173   late cornified envelope 2D 
LCE4A                 0.168   late cornified envelope 4A 
LCE2B                 0.147   late cornified envelope 2B 
LCE2C                 0.147   late cornified envelope 2C 
LCE3B                 0.127   late cornified envelope 3B 
LCE3A                 0.122   late cornified envelope 3A 
C1orf68               0.112   skin-specific protein 32 
KRTAP17-1             0.107   keratin associated protein 17-1 
KRTAP5-3              0.107   keratin associated protein 5-3 
KRTAP5-1              0.107   keratin associated protein 5-1 
KRTAP5-5              0.096   keratin associated protein 5-5 
KRTAP5-8              0.096   keratin associated protein 5-8 
KRTAP5-10             0.091   keratin associated protein 5-10 
KRTAP5-7              0.091   keratin associated protein 5-7 
KRTAP5-11             0.091   keratin associated protein 5-11 
KRTAP5-6              0.091   keratin associated protein 5-6 
KRTAP5-2              0.086   keratin associated protein 5-2 
LCE3E                 0.086   late cornified envelope 3E 
C3orf32               0.081   hypothetical protein LOC51066 
C9orf82               0.076   hypothetical protein LOC79886 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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