Name: LCE1C | Sequence: fasta or formatted (118aa) | NCBI GI: 30387652 | |
Description: late cornified envelope 1C
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Referenced in: Late Cornified Envelope Family
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 0.0 0 0 C cysteine 20.3 24 2 D aspartate 0.0 0 0 E glutamate 0.0 0 0 F phenylalanine 0.0 0 0 G glycine 17.8 21 4 H histidine 4.2 5 2 I isoleucine 0.0 0 0 K lysine 5.1 6 1 L leucine 0.8 1 1 M methionine 0.8 1 1 N asparagine 0.0 0 0 P proline 13.6 16 3 Q glutamine 7.6 9 3 R arginine 4.2 5 4 S serine 22.0 26 3 T threonine 1.7 2 1 V valine 1.7 2 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 late cornified envelope 1C LCE1B 0.969 late cornified envelope 1B LOC100292632 0.957 PREDICTED: hypothetical protein LCE1E 0.957 late cornified envelope 1E LCE1F 0.934 late cornified envelope 1F LCE1D 0.849 late cornified envelope 1D LCE1A 0.845 late cornified envelope 1A LCE2D 0.593 late cornified envelope 2D LCE5A 0.589 late cornified envelope 5A LCE2A 0.585 late cornified envelope 2A LCE2B 0.574 late cornified envelope 2B LCE2C 0.570 late cornified envelope 2C LCE4A 0.481 late cornified envelope 4A LCE3C 0.326 late cornified envelope 3C LCE3B 0.318 late cornified envelope 3B LCE3E 0.310 late cornified envelope 3E LCE3D 0.298 late cornified envelope 3D LCE3A 0.275 late cornified envelope 3A CRCT1 0.174 cysteine-rich C-terminal 1 SPRR2A 0.147 small proline-rich protein 2A SPRR2B 0.147 small proline-rich protein 2B SPRR2E 0.147 small proline-rich protein 2E KRTAP17-1 0.143 keratin associated protein 17-1 SPRR2G 0.140 small proline-rich protein 2G KRTAP5-4 0.140 keratin associated protein 5-4 KRTAP5-7 0.136 keratin associated protein 5-7 KRTAP5-2 0.136 keratin associated protein 5-2 SPRR2F 0.136 small proline-rich protein 2F KRTAP5-10 0.136 keratin associated protein 5-10 KRTAP5-11 0.136 keratin associated protein 5-11Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.