Guide to the Human Genome
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Name: C1orf68 Sequence: fasta or formatted (250aa) NCBI GI: 67003568
Description:

skin-specific protein 32

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         13           1
 C cysteine           16.4         41           3
 D aspartate           2.0          5           2
 E glutamate           0.8          2           1
 F phenylalanine       0.8          2           1
 G glycine             9.2         23           2
 H histidine           0.4          1           1
 I isoleucine          1.6          4           2
 K lysine              4.0         10           1
 L leucine             1.6          4           1
 M methionine          1.2          3           1
 N asparagine          1.6          4           1
 P proline            12.0         30           2
 Q glutamine           9.6         24           2
 R arginine            2.8          7           2
 S serine              9.6         24           2
 T threonine           8.8         22           2
 V valine              6.4         16           1
 W tryptophan          0.4          1           1
 Y tyrosine            5.6         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   skin-specific protein 32 
KPRP                  0.080   keratinocyte proline-rich protein 
KRTAP10-7             0.071   keratin associated protein 10-7 
KRTAP10-9             0.067   keratin associated protein 10-9 
KRTAP10-2             0.067   keratin associated protein 10-2 
KRTAP10-4             0.064   keratin associated protein 10-4 
KRTAP5-8              0.062   keratin associated protein 5-8 
KRTAP10-6             0.060   keratin associated protein 10-6 
LCE5A                 0.060   late cornified envelope 5A 
KRTAP10-5             0.058   keratin associated protein 10-5 
KRTAP10-3             0.058   keratin associated protein 10-3 
KRTAP10-10            0.058   keratin associated protein 10-10 
KRTAP4-8              0.054   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.054   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-12            0.054   keratin associated protein 10-12 
KRTAP4-8              0.054   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.054   PREDICTED: similar to keratin associated protein 4-...
KRTAP5-3              0.054   keratin associated protein 5-3 
KRTAP10-8             0.051   keratin associated protein 10-8 
LOC100131696          0.051   PREDICTED: keratin associated protein 
KRTAP4-8              0.051   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.051   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.051   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.051   keratin associated protein 4.8 
KRTAP10-1             0.051   keratin associated protein 10-1 
LCE1C                 0.049   late cornified envelope 1C 
KRTAP4-12             0.049   keratin associated protein 4-12 
LOC100130599          0.047   PREDICTED: hypothetical protein 
LOC100130599          0.047   PREDICTED: similar to Keratin-associated protein 10...
LOC729815             0.045   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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