| Name: C9orf82 | Sequence: fasta or formatted (361aa) | NCBI GI: 48976054 | |
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Description: hypothetical protein LOC79886
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 30 4 C cysteine 3.0 11 2 D aspartate 6.4 23 2 E glutamate 11.1 40 3 F phenylalanine 1.1 4 1 G glycine 8.9 32 3 H histidine 0.3 1 1 I isoleucine 5.0 18 2 K lysine 8.3 30 2 L leucine 9.4 34 2 M methionine 2.2 8 1 N asparagine 3.0 11 1 P proline 4.4 16 3 Q glutamine 4.7 17 2 R arginine 3.3 12 2 S serine 12.7 46 3 T threonine 2.5 9 1 V valine 4.2 15 1 W tryptophan 0.3 1 1 Y tyrosine 0.8 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC79886 AP3B2 0.031 adaptor-related protein complex 3, beta 2 subunit [H... LOR 0.031 loricrin CRCT1 0.022 cysteine-rich C-terminal 1 ZIC2 0.022 zinc finger protein of the cerebellum 2 LCE1D 0.022 late cornified envelope 1D DMKN 0.022 dermokine isoform 4 precursor DMKN 0.022 dermokine isoform 5 precursor DMKN 0.022 dermokine isoform 3 precursor DMKN 0.022 dermokine isoform 2 precursor CDT1 0.021 chromatin licensing and DNA replication factor 1 [H... LRCH2 0.021 leucine-rich repeats and calponin homology (CH) dom... BRWD1 0.021 bromodomain and WD repeat domain containing 1 isofor... BRWD1 0.021 bromodomain and WD repeat domain containing 1 isofor... KRT9 0.021 keratin 9 FOXF2 0.021 forkhead box F2 YEATS2 0.021 YEATS domain containing 2 KRTAP5-1 0.021 keratin associated protein 5-1 HECA 0.019 headcase MAP3K10 0.019 mitogen-activated protein kinase kinase kinase 10 [H... DACH1 0.019 dachshund homolog 1 isoform b DACH1 0.019 dachshund homolog 1 isoform a DACH1 0.019 dachshund homolog 1 isoform c TTC6 0.019 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.019 PREDICTED: tetratricopeptide repeat domain 6 C14orf25 0.019 PREDICTED: chromosome 14 open reading frame 25 [Hom... ANP32E 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32E 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 fam... LOC643446 0.018 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.018 PREDICTED: similar to ribonucleic acid binding prot...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
