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Search of human proteins with 94818738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94818738 C1q and tumor necrosis factor related protein 2
[Homo sapiens]
(330 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 708 0.0
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 349 2e-96
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 349 2e-96
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 349 2e-96
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 201 1e-51
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 199 2e-51
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 191 8e-49
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 166 2e-41
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 162 5e-40
gi|4757760 adiponectin precursor [Homo sapiens] 160 1e-39
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 152 3e-37
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 152 3e-37
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 150 2e-36
gi|87298828 complement component 1, q subcomponent, B chain prec... 139 3e-33
gi|56786155 complement component 1, q subcomponent, C chain prec... 133 2e-31
gi|166235903 complement component 1, q subcomponent, C chain pre... 133 2e-31
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 132 3e-31
gi|7705753 complement component 1, q subcomponent, A chain precu... 130 2e-30
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 128 8e-30
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 117 1e-26
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 117 2e-26
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 115 7e-26
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 112 3e-25
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 112 3e-25
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 112 3e-25
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 112 3e-25
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 112 3e-25
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 112 3e-25
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens] 112 3e-25
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens] 112 3e-25
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 708 bits (1827), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MGKLCLGPTLCPAAAAEESRDAEPRRELLCSGRPWTWRAAARVTTMIPWVLLACALPCAA 60
MGKLCLGPTLCPAAAAEESRDAEPRRELLCSGRPWTWRAAARVTTMIPWVLLACALPCAA
Sbjct: 1 MGKLCLGPTLCPAAAAEESRDAEPRRELLCSGRPWTWRAAARVTTMIPWVLLACALPCAA 60
Query: 61 DPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR 120
DPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR
Sbjct: 61 DPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR 120
Query: 121 GDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP 180
GDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP
Sbjct: 121 GDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP 180
Query: 181 GLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIY 240
GLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIY
Sbjct: 181 GLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIY 240
Query: 241 YFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE 300
YFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE
Sbjct: 241 YFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE 300
Query: 301 QNGLFYDPYWTDSLFTGFLIYADQDDPNEV 330
QNGLFYDPYWTDSLFTGFLIYADQDDPNEV
Sbjct: 301 QNGLFYDPYWTDSLFTGFLIYADQDDPNEV 330
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 349 bits (895), Expect = 2e-96
Identities = 159/250 (63%), Positives = 192/250 (76%)
Query: 76 SPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
SP+ +CS+PG GPPGPPGA G G GR+G PG+DG+DG G++G+ G G G+TG
Sbjct: 29 SPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPL 88
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKS 195
G G KG G G+ GP GP+G G G G PG KG +G++G+PGLPG C CGS KS
Sbjct: 89 GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS 148
Query: 196 AFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255
AFSV +T SYP ERLPI F+K+L NEG HYN ++GKF+C PGIYYF+YDITLANKHLAI
Sbjct: 149 AFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAI 208
Query: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLF 315
GLVHNGQYRI+TFDANTGNHDVASGST++ L+ DEVWL+IF+++QNGLF DP W DSLF
Sbjct: 209 GLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLF 268
Query: 316 TGFLIYADQD 325
+GFL+Y D D
Sbjct: 269 SGFLLYVDTD 278
Score = 36.2 bits (82), Expect = 0.041
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
K P + G QG G G GP G G +G G G G G++GD G G
Sbjct: 84 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 137
Score = 32.0 bits (71), Expect = 0.78
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
P+G PR + G PG G PG G G G GLPG
Sbjct: 18 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPG 62
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 349 bits (895), Expect = 2e-96
Identities = 159/250 (63%), Positives = 192/250 (76%)
Query: 76 SPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
SP+ +CS+PG GPPGPPGA G G GR+G PG+DG+DG G++G+ G G G+TG
Sbjct: 29 SPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPL 88
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKS 195
G G KG G G+ GP GP+G G G G PG KG +G++G+PGLPG C CGS KS
Sbjct: 89 GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS 148
Query: 196 AFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255
AFSV +T SYP ERLPI F+K+L NEG HYN ++GKF+C PGIYYF+YDITLANKHLAI
Sbjct: 149 AFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAI 208
Query: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLF 315
GLVHNGQYRI+TFDANTGNHDVASGST++ L+ DEVWL+IF+++QNGLF DP W DSLF
Sbjct: 209 GLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLF 268
Query: 316 TGFLIYADQD 325
+GFL+Y D D
Sbjct: 269 SGFLLYVDTD 278
Score = 36.2 bits (82), Expect = 0.041
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
K P + G QG G G GP G G +G G G G G++GD G G
Sbjct: 84 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 137
Score = 32.0 bits (71), Expect = 0.78
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
P+G PR + G PG G PG G G G GLPG
Sbjct: 18 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPG 62
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 349 bits (895), Expect = 2e-96
Identities = 159/250 (63%), Positives = 192/250 (76%)
Query: 76 SPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
SP+ +CS+PG GPPGPPGA G G GR+G PG+DG+DG G++G+ G G G+TG
Sbjct: 36 SPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPL 95
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKS 195
G G KG G G+ GP GP+G G G G PG KG +G++G+PGLPG C CGS KS
Sbjct: 96 GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS 155
Query: 196 AFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255
AFSV +T SYP ERLPI F+K+L NEG HYN ++GKF+C PGIYYF+YDITLANKHLAI
Sbjct: 156 AFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAI 215
Query: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLF 315
GLVHNGQYRI+TFDANTGNHDVASGST++ L+ DEVWL+IF+++QNGLF DP W DSLF
Sbjct: 216 GLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLF 275
Query: 316 TGFLIYADQD 325
+GFL+Y D D
Sbjct: 276 SGFLLYVDTD 285
Score = 36.2 bits (82), Expect = 0.041
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
K P + G QG G G GP G G +G G G G G++GD G G
Sbjct: 91 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
Score = 32.0 bits (71), Expect = 0.78
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
P+G PR + G PG G PG G G G GLPG
Sbjct: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPG 69
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 201 bits (510), Expect = 1e-51
Identities = 111/248 (44%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
Query: 83 LPGPQGPPGPPGAPGPSGM---MGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPG 139
+ G QG G PG GP G+ MG G G+ G G G++GD G GP G GN G G
Sbjct: 87 IKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLG 146
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSV 199
P G G +G G GPKG G G G PG +G +G KG+ G G KSAF+V
Sbjct: 147 PTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTV 206
Query: 200 AVT--KSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGL 257
+T +P +PIKFDKIL NE HY+ + GKF C + G+YYFTY IT+ ++++ + L
Sbjct: 207 GLTVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRNVQVSL 266
Query: 258 VHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQ-NGLFYDPYWTDSLFT 316
V NG + T DA + D ASGS +L LK GDE+WLQ+ E+ NGLF D D+ FT
Sbjct: 267 VKNGVKILHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADED-DDTTFT 325
Query: 317 GFLIYADQ 324
GFL+++ Q
Sbjct: 326 GFLLFSSQ 333
Score = 97.4 bits (241), Expect = 2e-20
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGA 146
QG PG PG PG +G+ PG+DG+DG GD+GD+GE G PG G G G KG+ GA
Sbjct: 25 QGHPGIPGNPGHNGL------PGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGA 78
Query: 147 IGRA---GPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G+ G +G +G G+PGKHG G GP G+KG G GP
Sbjct: 79 DGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGP 120
Score = 55.8 bits (133), Expect = 5e-08
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 122 DSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
D+ +G PG GN PG G G GR G +G KG G PG G+PGK G G+KGE G
Sbjct: 21 DTCRQGHPGIPGN---PGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERG 77
Query: 182 LPG 184
G
Sbjct: 78 ADG 80
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 199 bits (507), Expect = 2e-51
Identities = 110/246 (44%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Query: 83 LPGPQGPPGPPGAPGPSGM---MGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPG 139
+ G QG G PG GP G+ MG G G+ G G G++GD G GP G GN G G
Sbjct: 87 IKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLG 146
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSV 199
P G G +G G GPKG G G G PG +G +G KG+ G G KSAF+V
Sbjct: 147 PTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTV 206
Query: 200 AVT--KSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGL 257
+T +P +PIKFDKIL NE HY+ ++GKF C + G+YYFTY IT+ ++++ + L
Sbjct: 207 GLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSL 266
Query: 258 VHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQ-NGLFYDPYWTDSLFT 316
V NG + T DA + D ASG +L LK GDEVWLQ+ E+ NGLF D D+ FT
Sbjct: 267 VKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADED-DDTTFT 325
Query: 317 GFLIYA 322
GFL+++
Sbjct: 326 GFLLFS 331
Score = 97.8 bits (242), Expect = 1e-20
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGA 146
QG PG PG PG +G+ PG+DG+DG GD+GD+GE G PG G G G KG+ GA
Sbjct: 25 QGHPGIPGNPGHNGL------PGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGA 78
Query: 147 IGRA---GPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G+ G +G +G G+PGKHG G GP G+KG G GP
Sbjct: 79 DGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGP 120
Score = 57.8 bits (138), Expect = 1e-08
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 122 DSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
D+ +G PG GN PG G G GR G +G KG G PG+ G+PGK G G+KGE G
Sbjct: 21 DTCRQGHPGIPGN---PGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERG 77
Query: 182 LPG 184
G
Sbjct: 78 ADG 80
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 191 bits (485), Expect = 8e-49
Identities = 120/289 (41%), Positives = 149/289 (51%), Gaps = 47/289 (16%)
Query: 71 DFRKGSPQLVCSLPGPQGPPG---PPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
D KG+P LPGP+G PG PPG PGP G G G PG +G+ G G G G G
Sbjct: 397 DGPKGNP----GLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRG 452
Query: 128 PPGRTGNRGKPGPKGKAGAIGRAGPRG--PKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
P G G G PG KG G+ G GP G KG+NG G PG GP+G GEPGLPGP
Sbjct: 453 PIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGP---PGPPGPRGHSGEPGLPGP 509
Query: 186 ------------------------------CSCGSGHTK---SAFSVAVTKSYPRERLPI 212
S G T SAF+V ++K+YP PI
Sbjct: 510 PGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPI 569
Query: 213 KFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANT 272
FDKIL N HY+ +G F C +PGIYYF+Y + + H+ +GL NG + T+D T
Sbjct: 570 PFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKNGTPVMYTYDEYT 629
Query: 273 -GNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLI 320
G D ASGS I+ L + D+VWLQ+ +E NGL+ Y S F+GFL+
Sbjct: 630 KGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEY-VHSSFSGFLV 677
Score = 102 bits (254), Expect = 5e-22
Identities = 57/114 (50%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 75 GSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
G P L L G +GP G PG PG G G G PGK G G G+ G G +G PG +
Sbjct: 299 GKPGLP-GLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPG---S 354
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPG---KHGTPGKKGPKGKKGEPGLPGP 185
G PGPKG+ G G AG G KG G+PG K G PGK G G KG PGLPGP
Sbjct: 355 HGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGP 408
Score = 99.0 bits (245), Expect = 5e-21
Identities = 57/118 (48%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 83 LPGPQG---PPGPPGAPGPSGMMG------RMGFPGKDGQDGHDGDRGDSGEEGPPGRTG 133
LPGP+G P GP G PG G G + G+PGK G DG G+ G G +G PG G
Sbjct: 357 LPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGG 416
Query: 134 NRGKPGPKGKAGAIG------RAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G PGP G AGA G AGPRG G+ GT G G PG G G KG+PG PGP
Sbjct: 417 PPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGP 474
Score = 97.8 bits (242), Expect = 1e-20
Identities = 54/113 (47%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGF--PGKDGQDGHDGDRGDS-----GEEGPPGRTGNRG 136
PGP GP GP G PGPSG G+ G+ PG G+ G G G S G G PG+ G RG
Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERG 121
Query: 137 KPGPKGKAGAIGRAGPRGPKGVNGTPGK-----HGTPGKKGPKGKKGEPGLPG 184
GPKG G G GPRGP G G PG G PG++GP G G G PG
Sbjct: 122 PYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPG 174
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/138 (41%), Positives = 68/138 (49%), Gaps = 30/138 (21%)
Query: 83 LPGPQGPPGPPGAPGPSGMM--------------GRMGFPGKDGQDGHDGDRGDSGEEG- 127
LPGP+GPPGPPG PGP+G+ G GFPG+ G G G G GE G
Sbjct: 134 LPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGY 193
Query: 128 -PPGRTGNRGKPGPKGKAGAIGR--AGPRGPKGVNGTPGKHGT------------PGKKG 172
PGR G RG PGP+G G G G RG GV G PG G PG +G
Sbjct: 194 GAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQG 253
Query: 173 PKGKKGEPGLPGPCSCGS 190
P G++G G+ P + G+
Sbjct: 254 PPGERGPEGIGKPGAAGA 271
Score = 94.4 bits (233), Expect = 1e-19
Identities = 51/104 (49%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMG---FPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPK 141
GP G PG PG GP G MG G PG G G G+ G +G G PG G RG PG
Sbjct: 326 GPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSD 385
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
GK G G+ G GPKG G PG G PG GP PGLPGP
Sbjct: 386 GKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGP------PGLPGP 423
Score = 92.4 bits (228), Expect = 5e-19
Identities = 53/106 (50%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKG 142
LPGPQGP GP G PG +G+ G G GQ G GDRG GE GP G G +G PG +G
Sbjct: 204 LPGPQGPTGPSGPPG----VGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG 259
Query: 143 K--AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKK--GEPGLPG 184
G G AG G G+ GT G G PG GP G G+PGLPG
Sbjct: 260 PEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPG 305
Score = 88.6 bits (218), Expect = 7e-18
Identities = 51/110 (46%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G G PGAPG +G G GF GK G G G+RG +G G PG G +G G GK
Sbjct: 275 PGIPGTKGLPGAPGIAGPPGPPGF-GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGK 333
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGK---------KGEPGLPG 184
G G G GP+G G PG HG PG KG G KGE G PG
Sbjct: 334 PGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPG 383
Score = 88.6 bits (218), Expect = 7e-18
Identities = 46/101 (45%), Positives = 51/101 (50%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG GPPG G GP G+ G G PG G+ G G G G +G G G+ GKPG GK
Sbjct: 334 PGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGK 393
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G G G G G G PG G PG GP G G G+PG
Sbjct: 394 PGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
Score = 86.3 bits (212), Expect = 3e-17
Identities = 49/101 (48%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G QG PGPPG GP G G G PGK G G G +G+ G GPPG + GKPG G
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGKPGY-GSPGLQGEPGLPGPPGPSAV-GKPGVPGLP 114
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G GP GPKG G G GP+G G PG+PGP
Sbjct: 115 GKPGERGPYGPKG------DVGPAGLPGPRGPPGPPGIPGP 149
Score = 84.3 bits (207), Expect = 1e-16
Identities = 54/122 (44%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKG- 142
PG GP GPPG GP G G G GK G G G G G +G PG G G PGP G
Sbjct: 240 PGEMGPIGPPGPQGPPGERGPEGI-GKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGF 298
Query: 143 -KAGAIGRAGPRGPKGVNGTPGKH------GTPGK------------KGPKGKKGEPGLP 183
K G G G RGP G+ G PG G PGK +GPKG G GLP
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLP 358
Query: 184 GP 185
GP
Sbjct: 359 GP 360
Score = 82.4 bits (202), Expect = 5e-16
Identities = 54/134 (40%), Positives = 62/134 (46%), Gaps = 26/134 (19%)
Query: 75 GSPQLVCS--LPGPQGP--------PGPPGAP------GPSGMMGRMGFPGKDGQDGHDG 118
GSP L LPGP GP PG PG P GP G +G G PG G G G
Sbjct: 86 GSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPG 145
Query: 119 DRGDS--------GEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVN--GTPGKHGTP 168
G + G++GP G G RG PG KG G G G +G G G PG+ G P
Sbjct: 146 IPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLP 205
Query: 169 GKKGPKGKKGEPGL 182
G +GP G G PG+
Sbjct: 206 GPQGPTGPSGPPGV 219
Score = 66.6 bits (161), Expect = 3e-11
Identities = 38/82 (46%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 120 RGDSGEEGPPGRTGNRGKPGPKGKAGAIGRA-----------GPRGPK-----GVNGTPG 163
RG+ G GPPG G RG PGP G G G GP GP GV G PG
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPG 115
Query: 164 KHGTPGKKGPKGKKGEPGLPGP 185
K G G GPKG G GLPGP
Sbjct: 116 KPGERGPYGPKGDVGPAGLPGP 137
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 143 KAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGK--------KGEPGLPGP 185
K+ I G +G G G G G PG GP GK +GEPGLPGP
Sbjct: 49 KSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGP 99
Score = 31.6 bits (70), Expect = 1.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 158 VNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGS 190
V G G G PG GP+G G G PG GS
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGS 87
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 166 bits (421), Expect = 2e-41
Identities = 104/282 (36%), Positives = 146/282 (51%), Gaps = 32/282 (11%)
Query: 73 RKGSPQLVCS--LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG 130
+KGS C G +G G G+PG G G G G+ G+ G GD+G G+ G G
Sbjct: 192 QKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERG 251
Query: 131 RTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPC---- 186
G +G+ G KG+ G+ G +G G G NG PG G PG KG KG+ G PGL GP
Sbjct: 252 GKGQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKG 311
Query: 187 ---------------SCGSGHTK--------SAFSVAVTKSYPRERLPIKFDKILMNEGG 223
S G +K SAFS ++K +P +PIKF+KIL N+ G
Sbjct: 312 DIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQG 371
Query: 224 HYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNH-DVASGST 282
+Y+ +GKF C +PG Y F+Y IT+ + I LV + + ++ + G D AS
Sbjct: 372 NYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLLV 431
Query: 283 ILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYADQ 324
IL L GD+VWL++ + NG++ DS+FTGFL+Y ++
Sbjct: 432 ILKLSAGDQVWLEV-SKDWNGVYVSAE-DDSIFTGFLLYPEE 471
Score = 100 bits (248), Expect = 2e-21
Identities = 53/123 (43%), Positives = 64/123 (52%), Gaps = 18/123 (14%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP+G G G PGP G++G G G G+ G G+RGD G G PG+ G +G+PGPKG
Sbjct: 121 PGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGD 180
Query: 144 AGAIGRAGPRGPK------------------GVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G IG G +G K G G+PG HG PG KG KG+ GE G G
Sbjct: 181 KGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGD 240
Query: 186 CSC 188
C
Sbjct: 241 KGC 243
Score = 62.4 bits (150), Expect = 5e-10
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 115 GHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPG---KK 171
G G+ G++G+ GP G GN G PGP G G G G +G KG+ G G G PG K
Sbjct: 110 GQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKP 169
Query: 172 GPKGKKGEPGLPGPCSCG 189
G +G+ G G G G
Sbjct: 170 GAQGEPGPKGDKGNIGLG 187
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 162 bits (409), Expect = 5e-40
Identities = 104/289 (35%), Positives = 135/289 (46%), Gaps = 52/289 (17%)
Query: 83 LPGPQGPPGP------------PGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGP-- 128
LPG GPPGP PG PG +G +G+ G G GQ G G G G +GP
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAG 472
Query: 129 -------PGRTGNRGKPGP--KGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE 179
PG G G PGP +G+AG G AGP GP GV G+PG G PG GP G G
Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532
Query: 180 PG-----------LPGPCSCG----------------SGHTKSAFSVAVTKSYPRERLPI 212
PG LP G S H AF+ +T +P +P+
Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV 592
Query: 213 KFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDA-N 271
KFD+ L N YN ++G F C V G+YYF Y + + ++ + L N T+D
Sbjct: 593 KFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYK 652
Query: 272 TGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLI 320
G D ASG +L L+ D+VW+Q+ + NGL Y + S F+GFL+
Sbjct: 653 KGYLDQASGGAVLQLRPNDQVWVQMPSDQANGL-YSTEYIHSSFSGFLL 700
Score = 105 bits (261), Expect = 7e-23
Identities = 56/110 (50%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G PGPPG PGP+G+ G PG DG G GD+G+SG G PG G G GPKG
Sbjct: 219 PGQGGAPGPPGLPGPAGL----GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGP 274
Query: 144 --------AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
GA G GP+GP G G PG G PG GP G G PGLPGP
Sbjct: 275 PGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTG-YGMPGLPGP 323
Score = 99.0 bits (245), Expect = 5e-21
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGD---RGDSGEEGPPGRTGNRGKPGPK 141
GPQG GPPG PG +G+ GR G PG G+ G G G G++GP G G G PG +
Sbjct: 352 GPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G GA G GP GPKG G G+ G PG G G+KG+ GLPG
Sbjct: 412 GLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPG 454
Score = 97.8 bits (242), Expect = 1e-20
Identities = 56/124 (45%), Positives = 65/124 (52%), Gaps = 21/124 (16%)
Query: 83 LPGPQGPPGP-----PGAP----------GPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
LPG +GPPGP PG P GPSG+ G+ G PG+ G G G G +G +G
Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG 427
Query: 128 PPGRTGNRGKP------GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
PG TG G P G KG G G+ G RGP G+ G G G G +G G KGEPG
Sbjct: 428 EPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG 487
Query: 182 LPGP 185
LPGP
Sbjct: 488 LPGP 491
Score = 97.1 bits (240), Expect = 2e-20
Identities = 48/100 (48%), Positives = 57/100 (57%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G G PGP G GP+G+ G +G G+ G+DG G++G G GPPG G+ G PG +G
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPP 375
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G G AGP GP GV G G G G G G GE GLPG
Sbjct: 376 GPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPG 415
Score = 96.3 bits (238), Expect = 3e-20
Identities = 50/117 (42%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 84 PGPQGPPG--------PPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
PG +GPPG PG PGP G G G PG G G G+ G+ GE+GP G G
Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGH 192
G PG G G G GP+G G G PG G G +GP G G+PG+PG H
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAH 417
Score = 95.9 bits (237), Expect = 4e-20
Identities = 60/140 (42%), Positives = 66/140 (47%), Gaps = 35/140 (25%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSG--------MMGRMGFPGKDGQ------------ 113
K Q V PG QG PGP G PGP G +G+ G PG GQ
Sbjct: 174 KPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGP 233
Query: 114 --------DGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKH 165
DG G GD GE GPP G PGP+G+ GA+G GP G GV G PG
Sbjct: 234 AGLGKPGLDGLPGAPGDKGESGPP------GVPGPRGEPGAVGPKGPPGVDGV-GVPGAA 286
Query: 166 GTPGKKGPKGKKGEPGLPGP 185
G PG +GP G KGEPG GP
Sbjct: 287 GLPGPQGPSGAKGEPGTRGP 306
Score = 94.0 bits (232), Expect = 2e-19
Identities = 53/120 (44%), Positives = 61/120 (50%), Gaps = 21/120 (17%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT---GNRGKPG 139
LPGP+G GP G PG ++G G PG+DG+ G G +G G G PG G RG PG
Sbjct: 320 LPGPKGDRGPAGVPG---LLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376
Query: 140 PKGKA---------------GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
PKG+A G G AG G G G PG HG PG GPKG+ G G PG
Sbjct: 377 PKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPG 436
Score = 92.4 bits (228), Expect = 5e-19
Identities = 58/130 (44%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 72 FRKGSPQLVCSLPGP------QGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE 125
FR+G Q + +P P +G PGPPG PGP G G GFPGK G G G G G
Sbjct: 56 FREGKGQYL-EMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM-GKPGLHGQPGP 113
Query: 126 EGPPG--RTGNRGKP------GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKG--PKG 175
GPPG R G G P GP G+ G G G RG +G+ G PG G PG G G
Sbjct: 114 AGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPG 173
Query: 176 KKGEPGLPGP 185
K G G+PGP
Sbjct: 174 KPGAQGVPGP 183
Score = 91.7 bits (226), Expect = 8e-19
Identities = 56/153 (36%), Positives = 68/153 (44%), Gaps = 47/153 (30%)
Query: 84 PGPQGPPGPPGAPG----------------------------PSGMMGRMGFPGKDGQDG 115
PGP+GPPGPPG PG P G+ G++G PG+ G G
Sbjct: 85 PGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRG 144
Query: 116 HDGDRGDSGEEGP--------------PGRTGNRGKPGP---KGKAGAIGRAGPRGPKGV 158
G RGD G GP PG+ G +G PGP +G+ G G GP G +G+
Sbjct: 145 EPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGL 204
Query: 159 NGT--PGKHGTPGKKGPKGKKGEPGLPGPCSCG 189
G G+ G PG G G G PGLPGP G
Sbjct: 205 KGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLG 237
Score = 91.7 bits (226), Expect = 8e-19
Identities = 54/131 (41%), Positives = 65/131 (49%), Gaps = 29/131 (22%)
Query: 84 PGPQG---PPGPPGAPG------PSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
PGP+G P GPPG PG PSG+ G+ G PG+ G G G G +G +G PG TG
Sbjct: 375 PGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGR 434
Query: 135 RG------------------KPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGP--K 174
G +PG +G +G G GP GP G G PG G PG GP +
Sbjct: 435 PGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGE 494
Query: 175 GKKGEPGLPGP 185
G+ GEPG GP
Sbjct: 495 GRAGEPGTAGP 505
Score = 88.6 bits (218), Expect = 7e-18
Identities = 48/110 (43%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGH-----DGDRGDSGEEGPPGRTGNRGK 137
+PG G PGP G G G G G PG G G+ G +GD G G PG G+RG+
Sbjct: 282 VPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGE 341
Query: 138 PGPKGKAGAIGRAGPRGPKGVNGT---PGKHGTPGKKGPKGKKGEPGLPG 184
PG G+ G G G GP G+ G+ PG+ G PG KG G G PG+PG
Sbjct: 342 PGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPG 391
Score = 85.5 bits (210), Expect = 6e-17
Identities = 52/135 (38%), Positives = 59/135 (43%), Gaps = 30/135 (22%)
Query: 85 GPQGPPGPPGAPGPSGMM--------------GRMGFPGKDGQDGHDGDRGDSGEEGP-- 128
G +GPPGPPG PGPSG+ G G PG G+ G GDRG G+ G
Sbjct: 153 GLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQ 212
Query: 129 ---PGRTGNRGKPGPKGKAGAIGRAGP-----------RGPKGVNGTPGKHGTPGKKGPK 174
PG G G PGP G G G P +G G G PG G PG GPK
Sbjct: 213 PGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPK 272
Query: 175 GKKGEPGLPGPCSCG 189
G G G+ P + G
Sbjct: 273 GPPGVDGVGVPGAAG 287
Score = 42.4 bits (98), Expect = 6e-04
Identities = 22/56 (39%), Positives = 27/56 (48%)
Query: 129 PGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
P + G G P +GK + P P + G PG G PG +GP G G PG PG
Sbjct: 46 PMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPG 101
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 160 bits (405), Expect = 1e-39
Identities = 105/261 (40%), Positives = 138/261 (52%), Gaps = 35/261 (13%)
Query: 75 GSPQLVCSLPG------PQGP----PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSG 124
G+ L+ +LPG QGP P P GA +G M G PG G +G
Sbjct: 5 GAVLLLLALPGHDQETTTQGPGVLLPLPKGAC--TGWMA--GIPGHPGHNG--------- 51
Query: 125 EEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
PGR G G PG KG+ G G GP+G G G PG G G G +G+KGEPG
Sbjct: 52 ---APGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGE-- 106
Query: 185 PCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTY 244
G+ +SAFSV + +PI+F KI N+ HY+ S+GKF C +PG+YYF Y
Sbjct: 107 ----GAYVYRSAFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAY 162
Query: 245 DITLANKHLAIGLVHNGQYRIRTFDA-NTGNHDVASGSTILALKQGDEVWLQIF-YSEQN 302
IT+ K + + L + + T+D N D ASGS +L L+ GD+VWLQ++ E+N
Sbjct: 163 HITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERN 222
Query: 303 GLFYDPYWTDSLFTGFLIYAD 323
GL+ D DS FTGFL+Y D
Sbjct: 223 GLYADND-NDSTFTGFLLYHD 242
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 152 bits (385), Expect = 3e-37
Identities = 105/324 (32%), Positives = 141/324 (43%), Gaps = 88/324 (27%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGF------PGKDGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
GPQGPPGP G PG G G+ GF PG G G G +G++G++G PG G G
Sbjct: 420 GPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLL 479
Query: 139 GPKGK---------------------AGAIGRAGPRGPKGVNGTPGK------------- 164
GPKG+ +G IG G GPKG G PG
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAG 539
Query: 165 -HGTPGKKGPKGKKGEPGLPGPC------------------------------------- 186
HG PGK G G +G+PGLPGP
Sbjct: 540 LHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPH 599
Query: 187 --------SCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPG 238
+ G + AF+ +T +P P+KF+K+L N +YN +G F C VPG
Sbjct: 600 AYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPG 659
Query: 239 IYYFTYDITLANKHLAIGLVHNGQYRIRTFDA-NTGNHDVASGSTILALKQGDEVWLQIF 297
+YYF Y + ++ + L N + + T+D G D ASGS +L L+ GD V+LQ+
Sbjct: 660 VYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQM- 718
Query: 298 YSEQNGLFYDPYWTDSLFTGFLIY 321
SEQ Y + S F+G+L+Y
Sbjct: 719 PSEQAAGLYAGQYVHSSFSGYLLY 742
Score = 99.4 bits (246), Expect = 4e-21
Identities = 52/103 (50%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
GP G PG PG PGP G G +GFPG G+ G G +G G +G PG G GKPG G+
Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEV 446
Query: 145 GAIGR---AGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G G GP GPKG G G G PG G G KGEPG+PG
Sbjct: 447 GPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPG 489
Score = 97.8 bits (242), Expect = 1e-20
Identities = 53/113 (46%), Positives = 59/113 (52%), Gaps = 16/113 (14%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP+GPPGPPG PG G G GK G G+ G G G G PG+ G G PG KG+
Sbjct: 126 PGPRGPPGPPGLPGH----GIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGE 180
Query: 144 AGAIGRAGPRGPKGVNGTPGKH-----------GTPGKKGPKGKKGEPGLPGP 185
G G GP G G G PG H G PG+ GPKG +G GLPGP
Sbjct: 181 IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP 233
Score = 94.0 bits (232), Expect = 2e-19
Identities = 62/153 (40%), Positives = 68/153 (44%), Gaps = 50/153 (32%)
Query: 83 LPGPQGPPGP--------------PGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS----- 123
+PGPQGPPGP PG PGP G G G PG G G GD+G
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251
Query: 124 GEEGPPGR-----------------TGNRGKPGPKGKAGAIGRAGPRGPKGVNGT----- 161
G +GPPG TG G GP GK GA G GP+GP GV G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPG 311
Query: 162 ------PGKHGTPGKKGPKGKKGE---PGLPGP 185
PG+ G PG+ G G KGE PGLPGP
Sbjct: 312 IPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGP 344
Score = 93.6 bits (231), Expect = 2e-19
Identities = 52/116 (44%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 77 PQLVCSLPGPQGPPGPP--GAPGPSGMMGRMGFPGKDGQDGHDGDRGDS-----GEEGPP 129
PQ +PG QGPPG P G PG G+ G+ GFPG G+ G G G G+ G P
Sbjct: 297 PQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFP 356
Query: 130 GRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G+RG G G G G GP G G+ G PG+ G PG GP G G G PGP
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGP 412
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/121 (44%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 80 VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKD--------GQDGHDGDRGDSGEEGPPGR 131
V PGPQGP G PGAPG G G +G PG G+ G DG G G G G
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335
Query: 132 TGNRGKPGPKG--KAGAIGRAGPRGPKGVNGTPGKHGTPGKKGP------KGKKGEPGLP 183
G G PGP G G G GP+G +G+ G PG G G+KGP G GEPGLP
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLP 395
Query: 184 G 184
G
Sbjct: 396 G 396
Score = 92.0 bits (227), Expect = 6e-19
Identities = 58/134 (43%), Positives = 60/134 (44%), Gaps = 32/134 (23%)
Query: 83 LPGPQGPPG--PPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGP 140
LPGP G PG PG PGP G G G PG G G G G G GPPG G G PGP
Sbjct: 341 LPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGP 400
Query: 141 KGKAGAIGRAGPRG---------PKGVNGTPGKHGTPGK--------------------- 170
G GAIG GP+G P G G PG G PGK
Sbjct: 401 MGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP 460
Query: 171 KGPKGKKGEPGLPG 184
KG G+KG PGLPG
Sbjct: 461 KGEAGQKGVPGLPG 474
Score = 82.8 bits (203), Expect = 4e-16
Identities = 53/136 (38%), Positives = 60/136 (44%), Gaps = 33/136 (24%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGR------MGFPGKDGQDGHDG--DRGDSGEEGPPGRTGN 134
+PG G PG G PG G +G+ MG PG G G G G G G PG+ G
Sbjct: 162 MPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGP 221
Query: 135 RGKPGPKGKAGAIGRAGPRGPK--------GVNGTPGKHGT-----------------PG 169
+G GPKG G G GP+G K GV G PG HG PG
Sbjct: 222 KGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG 281
Query: 170 KKGPKGKKGEPGLPGP 185
+GP GK G PG PGP
Sbjct: 282 PQGPLGKPGAPGEPGP 297
Score = 58.9 bits (141), Expect = 6e-09
Identities = 39/101 (38%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 98 PSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA--GAIGRAGPRGP 155
P+ MG+ P K + RG+ G G PG G G PG G G G+ GP+G
Sbjct: 95 PAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGY 154
Query: 156 KGVN--------GTPGKHGTPGKKGPKGKKGE---PGLPGP 185
GV G PG G PG KG G+KGE G+PGP
Sbjct: 155 PGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGP 195
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 152 bits (385), Expect = 3e-37
Identities = 105/324 (32%), Positives = 141/324 (43%), Gaps = 88/324 (27%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGF------PGKDGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
GPQGPPGP G PG G G+ GF PG G G G +G++G++G PG G G
Sbjct: 420 GPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLL 479
Query: 139 GPKGK---------------------AGAIGRAGPRGPKGVNGTPGK------------- 164
GPKG+ +G IG G GPKG G PG
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAG 539
Query: 165 -HGTPGKKGPKGKKGEPGLPGPC------------------------------------- 186
HG PGK G G +G+PGLPGP
Sbjct: 540 LHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPH 599
Query: 187 --------SCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPG 238
+ G + AF+ +T +P P+KF+K+L N +YN +G F C VPG
Sbjct: 600 AYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPG 659
Query: 239 IYYFTYDITLANKHLAIGLVHNGQYRIRTFDA-NTGNHDVASGSTILALKQGDEVWLQIF 297
+YYF Y + ++ + L N + + T+D G D ASGS +L L+ GD V+LQ+
Sbjct: 660 VYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQM- 718
Query: 298 YSEQNGLFYDPYWTDSLFTGFLIY 321
SEQ Y + S F+G+L+Y
Sbjct: 719 PSEQAAGLYAGQYVHSSFSGYLLY 742
Score = 99.4 bits (246), Expect = 4e-21
Identities = 52/103 (50%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
GP G PG PG PGP G G +GFPG G+ G G +G G +G PG G GKPG G+
Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEV 446
Query: 145 GAIGR---AGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G G GP GPKG G G G PG G G KGEPG+PG
Sbjct: 447 GPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPG 489
Score = 97.8 bits (242), Expect = 1e-20
Identities = 53/113 (46%), Positives = 59/113 (52%), Gaps = 16/113 (14%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP+GPPGPPG PG G G GK G G+ G G G G PG+ G G PG KG+
Sbjct: 126 PGPRGPPGPPGLPGH----GIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGE 180
Query: 144 AGAIGRAGPRGPKGVNGTPGKH-----------GTPGKKGPKGKKGEPGLPGP 185
G G GP G G G PG H G PG+ GPKG +G GLPGP
Sbjct: 181 IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP 233
Score = 94.0 bits (232), Expect = 2e-19
Identities = 62/153 (40%), Positives = 68/153 (44%), Gaps = 50/153 (32%)
Query: 83 LPGPQGPPGP--------------PGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS----- 123
+PGPQGPPGP PG PGP G G G PG G G GD+G
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251
Query: 124 GEEGPPGR-----------------TGNRGKPGPKGKAGAIGRAGPRGPKGVNGT----- 161
G +GPPG TG G GP GK GA G GP+GP GV G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPG 311
Query: 162 ------PGKHGTPGKKGPKGKKGE---PGLPGP 185
PG+ G PG+ G G KGE PGLPGP
Sbjct: 312 IPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGP 344
Score = 93.6 bits (231), Expect = 2e-19
Identities = 52/116 (44%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 77 PQLVCSLPGPQGPPGPP--GAPGPSGMMGRMGFPGKDGQDGHDGDRGDS-----GEEGPP 129
PQ +PG QGPPG P G PG G+ G+ GFPG G+ G G G G+ G P
Sbjct: 297 PQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFP 356
Query: 130 GRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G+RG G G G G GP G G+ G PG+ G PG GP G G G PGP
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGP 412
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/121 (44%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 80 VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKD--------GQDGHDGDRGDSGEEGPPGR 131
V PGPQGP G PGAPG G G +G PG G+ G DG G G G G
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335
Query: 132 TGNRGKPGPKG--KAGAIGRAGPRGPKGVNGTPGKHGTPGKKGP------KGKKGEPGLP 183
G G PGP G G G GP+G +G+ G PG G G+KGP G GEPGLP
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLP 395
Query: 184 G 184
G
Sbjct: 396 G 396
Score = 92.0 bits (227), Expect = 6e-19
Identities = 58/134 (43%), Positives = 60/134 (44%), Gaps = 32/134 (23%)
Query: 83 LPGPQGPPG--PPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGP 140
LPGP G PG PG PGP G G G PG G G G G G GPPG G G PGP
Sbjct: 341 LPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGP 400
Query: 141 KGKAGAIGRAGPRG---------PKGVNGTPGKHGTPGK--------------------- 170
G GAIG GP+G P G G PG G PGK
Sbjct: 401 MGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP 460
Query: 171 KGPKGKKGEPGLPG 184
KG G+KG PGLPG
Sbjct: 461 KGEAGQKGVPGLPG 474
Score = 82.8 bits (203), Expect = 4e-16
Identities = 53/136 (38%), Positives = 60/136 (44%), Gaps = 33/136 (24%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGR------MGFPGKDGQDGHDG--DRGDSGEEGPPGRTGN 134
+PG G PG G PG G +G+ MG PG G G G G G G PG+ G
Sbjct: 162 MPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGP 221
Query: 135 RGKPGPKGKAGAIGRAGPRGPK--------GVNGTPGKHGT-----------------PG 169
+G GPKG G G GP+G K GV G PG HG PG
Sbjct: 222 KGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG 281
Query: 170 KKGPKGKKGEPGLPGP 185
+GP GK G PG PGP
Sbjct: 282 PQGPLGKPGAPGEPGP 297
Score = 58.9 bits (141), Expect = 6e-09
Identities = 39/101 (38%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 98 PSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA--GAIGRAGPRGP 155
P+ MG+ P K + RG+ G G PG G G PG G G G+ GP+G
Sbjct: 95 PAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGY 154
Query: 156 KGVN--------GTPGKHGTPGKKGPKGKKGE---PGLPGP 185
GV G PG G PG KG G+KGE G+PGP
Sbjct: 155 PGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGP 195
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 150 bits (378), Expect = 2e-36
Identities = 89/236 (37%), Positives = 117/236 (49%), Gaps = 31/236 (13%)
Query: 90 PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGR 149
PG PG PG G G G PG+DG+DG DG G GE+G GR G PGP+G G G
Sbjct: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRP---GLPGPRGDPGPRGE 85
Query: 150 AGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRER 209
AGP GP G G+ P + K+ E +P P
Sbjct: 86 AGPAGP---TGPAGECSVPPRSAFSAKRSESRVPPPSDA--------------------- 121
Query: 210 LPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFD 269
P+ FD++L+NE GHY+A +GKF C VPG+YYF T+ L LV NG+ F
Sbjct: 122 -PLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ 180
Query: 270 ANTGNHDVA--SGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYAD 323
G A SG ++ L+ D+VW+Q+ + G+ Y TDS F+GFL+Y+D
Sbjct: 181 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGI-YASIKTDSTFSGFLVYSD 235
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 139 bits (350), Expect = 3e-33
Identities = 94/253 (37%), Positives = 128/253 (50%), Gaps = 33/253 (13%)
Query: 78 QLVCS-LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRG 136
QL C+ P G PG PG PGP G G G G+ G G GD G+ GE+G PG GN G
Sbjct: 28 QLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNPG 87
Query: 137 KPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSA 196
K GPKG P GPKG G PG GPKG+ G+ K A
Sbjct: 88 KVGPKG---------PMGPKG------GPGAPGAPGPKGESGD---------YKATQKIA 123
Query: 197 FSVAVTKSYP-RERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255
FS T + P R I+FD ++ N +Y SGKF C VPG+YYFTY + + +L +
Sbjct: 124 FSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHAS-SRGNLCV 182
Query: 256 GLVHNGQ--YRIRTF-DANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTD 312
L+ + ++ TF D V +G +L L+QG+ V+LQ +++N L +
Sbjct: 183 NLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQA--TDKNSLL-GMEGAN 239
Query: 313 SLFTGFLIYADQD 325
S+F+GFL++ D +
Sbjct: 240 SIFSGFLLFPDME 252
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 133 bits (334), Expect = 2e-31
Identities = 85/233 (36%), Positives = 122/233 (52%), Gaps = 21/233 (9%)
Query: 94 GAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPR 153
G G GM G G PGKDG DG G +G+ G PG G +G+ G G G G+ GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 154 GPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVA-VTKSYPRERLPI 212
GP G+ G PG G PG+ G +G+ + +S F+V T P I
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQ------------KFQSVFTVTRQTHQPPAPNSLI 138
Query: 213 KFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANT 272
+F+ +L N G Y+ S+GKF C VPG+YYF Y + +L + L +G ++ TF +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196
Query: 273 G-NHDVASGSTILALKQGDEVWLQI-FYSEQNGLFYDPYWTDSLFTGFLIYAD 323
+ V SG +L L+ G+EVWL + Y + G+ +DS+F+GFL++ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI----QGSDSVFSGFLLFPD 245
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 133 bits (334), Expect = 2e-31
Identities = 85/233 (36%), Positives = 122/233 (52%), Gaps = 21/233 (9%)
Query: 94 GAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPR 153
G G GM G G PGKDG DG G +G+ G PG G +G+ G G G G+ GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 154 GPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVA-VTKSYPRERLPI 212
GP G+ G PG G PG+ G +G+ + +S F+V T P I
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQ------------KFQSVFTVTRQTHQPPAPNSLI 138
Query: 213 KFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANT 272
+F+ +L N G Y+ S+GKF C VPG+YYF Y + +L + L +G ++ TF +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196
Query: 273 G-NHDVASGSTILALKQGDEVWLQI-FYSEQNGLFYDPYWTDSLFTGFLIYAD 323
+ V SG +L L+ G+EVWL + Y + G+ +DS+F+GFL++ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI----QGSDSVFSGFLLFPD 245
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 132 bits (333), Expect = 3e-31
Identities = 88/246 (35%), Positives = 123/246 (50%), Gaps = 23/246 (9%)
Query: 97 GPSGMMGRMG--------FPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIG 148
GP G +G +P + G D GD+ E + GP+GK G G
Sbjct: 17 GPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTG 76
Query: 149 RAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRE 208
+ GP GP G G PG G PG+KG GK G PGLPG G+ T + +V Y
Sbjct: 77 KPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGL 136
Query: 209 RLP------IKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLA---NKHLAIGLVH 259
+ P +KFD ++ N G +Y+A+SGKF C +PG Y+FTY + + + L
Sbjct: 137 KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCK 196
Query: 260 NGQYRIRTF--DANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTG 317
NGQ R DA+ N+D AS S IL L GDEV++++ + +G + Y S F+G
Sbjct: 197 NGQVRASAIAQDADQ-NYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKY---STFSG 252
Query: 318 FLIYAD 323
F+IY+D
Sbjct: 253 FIIYSD 258
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 130 bits (326), Expect = 2e-30
Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 28/233 (12%)
Query: 98 PSGMMGRMGFPGKDGQDGHDGDRGDSG----EEGPPGRTGNRGKPGPKGKAGAIGRAGPR 153
P G G G PG+ G+ G G++G+ G G G G++G+PGP G G +G GP
Sbjct: 29 PDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPS 88
Query: 154 GPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIK 213
GP G G PG GT G P K +P + AFS A+ ++ P +
Sbjct: 89 GPLGARGIPGIKGTKG--SPGNIKDQP-------------RPAFS-AIRRNPPMGGNVVI 132
Query: 214 FDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTF----- 268
FD ++ N+ Y SG+FVC VPG YYFT+ + L+ + + +V + + ++R
Sbjct: 133 FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV-LSQWEICLSIVSSSRGQVRRSLGFCD 191
Query: 269 DANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIY 321
N G V SG +L L+QGD+VW++ + G Y DS+F+GFLI+
Sbjct: 192 TTNKGLFQVVSGGMVLQLQQGDQVWVE--KDPKKGHIYQGSEADSVFSGFLIF 242
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 128 bits (321), Expect = 8e-30
Identities = 77/202 (38%), Positives = 109/202 (53%), Gaps = 24/202 (11%)
Query: 139 GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFS 198
GPKG+AG G+AGPRGP G G PG G PG+KG G++G PG PG + A S
Sbjct: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAA---GAIS 117
Query: 199 VAVTKSYPRERL------------PIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDI 246
A + P+ +KFD ++ N G HY+ ++GKF C +PGIY+FTY +
Sbjct: 118 AATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHV 177
Query: 247 TLA---NKHLAIGLVHNGQYRIRTF--DANTGNHDVASGSTILALKQGDEVWLQIFYSEQ 301
+ + L N Q R DA+ N+D AS S +L L+ GDEV++++ +
Sbjct: 178 LMRGGDGTSMWADLCKNNQVRASAIAQDADQ-NYDYASNSVVLHLEPGDEVYIKLDGGKA 236
Query: 302 NGLFYDPYWTDSLFTGFLIYAD 323
+G + Y S F+GF+IYAD
Sbjct: 237 HGGNNNKY---STFSGFIIYAD 255
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 117 bits (294), Expect = 1e-26
Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 48/255 (18%)
Query: 75 GSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
G ++VC GP+GP GP GAP PP G
Sbjct: 26 GRCRMVCDPHGPRGP-GPDGAPASV----------------------------PPFPPGA 56
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHT- 193
+G+ G +GKAG G GP GP+G G PG+ G PG GP PG + +G+
Sbjct: 57 KGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPG--------PGGVAPAAGYVP 108
Query: 194 KSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLA---N 250
+ AF + + + + ++FD ++ N G Y A+SGKF C +PG+Y+F Y + +
Sbjct: 109 RIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDG 167
Query: 251 KHLAIGLVHNGQYRIRTF--DANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDP 308
+ L+ NGQ R DA+ N+D AS S IL L GDEV++++ + +G +
Sbjct: 168 TSMWADLMKNGQVRASAIAQDADQ-NYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNK 226
Query: 309 YWTDSLFTGFLIYAD 323
Y S F+GF+IY D
Sbjct: 227 Y---STFSGFIIYPD 238
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 117 bits (292), Expect = 2e-26
Identities = 87/273 (31%), Positives = 129/273 (47%), Gaps = 36/273 (13%)
Query: 75 GSPQLVCSLPGPQGPPG-PPGA----PGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPP 129
G+ +++C P P G PPGA PGPS + + +GP
Sbjct: 27 GTCRMICD-PYTAAPGGEPPGAKAQPPGPSTA-------ALEVMQDLSANPPPPFIQGPK 78
Query: 130 GRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCG 189
G G GKPGP+G G G GPRGP G G G+ G PG + G G+ G +
Sbjct: 79 GDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGV 138
Query: 190 SGHTKSAFSVAVTKSYPRERLP--------------IKFDKILMNEGGHYNASSGKFVCG 235
G ++ + A++ ++ ++ +KFD ++ N G HY+ ++GKF C
Sbjct: 139 GGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQ 198
Query: 236 VPGIYYFTYDITLA---NKHLAIGLVHNGQYRIRTF--DANTGNHDVASGSTILALKQGD 290
V GIY+FTY I + + L NGQ R DA+ N+D AS S +L L GD
Sbjct: 199 VRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ-NYDYASNSVVLHLDSGD 257
Query: 291 EVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYAD 323
EV++++ + +G + Y S F+GFL+Y D
Sbjct: 258 EVYVKLDGGKAHGGNNNKY---STFSGFLLYPD 287
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 115 bits (287), Expect = 7e-26
Identities = 64/143 (44%), Positives = 74/143 (51%), Gaps = 39/143 (27%)
Query: 82 SLPGPQGP------PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR---------GDSGEE 126
S+PGP GP PGPPGAPGP G G G PG+ G G G R GD GE
Sbjct: 176 SVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEA 235
Query: 127 GPPGRTGNRGKPGPKGKA---------------------GAIGRAGPRGPKGVNGTPGKH 165
G PGR G RG PGP+G GA G AGP GPKG G+PG++
Sbjct: 236 GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGEN 295
Query: 166 GTPGKKGPK---GKKGEPGLPGP 185
G PG+ GP+ G++G PG PGP
Sbjct: 296 GAPGQMGPRGLPGERGRPGAPGP 318
Score = 108 bits (269), Expect = 9e-24
Identities = 53/102 (51%), Positives = 57/102 (55%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP GP GPPG G G G G G G G G G +G GPPG +GN G PGP G
Sbjct: 841 PGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP 900
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
AG G GPRG G G PG+ G PG GP G+KG PG GP
Sbjct: 901 AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGP 942
Score = 106 bits (264), Expect = 3e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 84 PGPQGPPG---PPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKP-- 138
PGP GPPG PPG G G G G PG+DG G GDRG++G GPPG G G P
Sbjct: 997 PGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP 1056
Query: 139 -GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GP GK+G G GP GP G G G G G +GP+G KGE G G
Sbjct: 1057 VGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQG 1103
Score = 103 bits (256), Expect = 3e-22
Identities = 50/104 (48%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
GP GP GP G PGP G G G PG G G G+ G G +GPPG G GK G +G+
Sbjct: 416 GPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEP 475
Query: 145 GAIGRAGP---RGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G GP RG G G PG G G KGP G++G PG GP
Sbjct: 476 GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGP 519
Score = 102 bits (253), Expect = 6e-22
Identities = 57/130 (43%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDG---------------HDG 118
+ PQ GPQG G PG PGP+G G G PG DGQ G G
Sbjct: 354 EAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG 413
Query: 119 DRGDSGEEGP---PGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKG 175
RG SG +GP PG GN G+PG G G G G GP GV G PG G GK+G +G
Sbjct: 414 ARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARG 473
Query: 176 KKGEPGLPGP 185
+ G GLPGP
Sbjct: 474 EPGPTGLPGP 483
Score = 102 bits (253), Expect = 6e-22
Identities = 55/117 (47%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 84 PGPQGP---PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGK--- 137
PGP G PGPPG PG G G MGFPG G G G G+ G GPPG G GK
Sbjct: 556 PGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGE 615
Query: 138 ------PGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP---GLPGP 185
PGP G AG G GP G G G PG G PG+ G G++G P G PGP
Sbjct: 616 AGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGP 672
Score = 101 bits (251), Expect = 1e-21
Identities = 53/110 (48%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G GP GP G+PG +G G G PG G G G G G+ GPPG G G+PGP G
Sbjct: 512 GSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPP 571
Query: 145 GAIGRAGPR---GPKGVNGTPGK------HGTPGKKGPKGKKGEPGLPGP 185
GA G+AG GPKG G PGK G PG GP GK GE G GP
Sbjct: 572 GARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGP 621
Score = 100 bits (250), Expect = 1e-21
Identities = 54/110 (49%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGK------DGQDGHDGDRGDSGEEGP---PGRTGN 134
PGP+G G PGAPG G G G PG G G +G RG GE GP PG G
Sbjct: 427 PGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE 486
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
RG PG +G GA G AGP+GP G G+PG G G G G+ GE GLPG
Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPG 536
Score = 100 bits (250), Expect = 1e-21
Identities = 52/109 (47%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 83 LPGPQG------PPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRG 136
LPGP+G P G G+PG G+ G G G G G GD+G+SG GP G TG RG
Sbjct: 738 LPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARG 797
Query: 137 KPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
PG +G+ G G AG GP G +G PG G PG G KG G PG GP
Sbjct: 798 APGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGP 846
Score = 100 bits (250), Expect = 1e-21
Identities = 54/122 (44%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 85 GPQGPPGP------------PGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
GP GP GP PG PGP+G G G G+ G G GD G G+ GPPG
Sbjct: 785 GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA 844
Query: 133 GNRGKPGPKGKAGAIGRAGPR---GPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCG 189
G G PGP G GA G G R GP G G PG G G GP G G PG PGP
Sbjct: 845 GPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE 904
Query: 190 SG 191
G
Sbjct: 905 GG 906
Score = 100 bits (249), Expect = 2e-21
Identities = 51/108 (47%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G PG G GP G G G PG G G +G +G GE GP GR G G PGP G
Sbjct: 871 PGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKK------GPKGKKGEPGLPGP 185
AG G G GP G GTPG G G++ G +G++G PGLPGP
Sbjct: 931 AGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP 978
Score = 100 bits (248), Expect = 2e-21
Identities = 57/137 (41%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 85 GPQGPPGPPGAPG---------PSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
GP GP G PG+PG P G+ G G PG G G G+ G +G GPPG TG
Sbjct: 281 GPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPA 340
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG-PCSCGSGHTK 194
G PG G GA G AGP+GP+G G G G PG GP G G G PG G+
Sbjct: 341 GPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGAN 400
Query: 195 SAFSVAVTKSYPRERLP 211
A +A +P R P
Sbjct: 401 GAPGIAGAPGFPGARGP 417
Score = 100 bits (248), Expect = 2e-21
Identities = 53/116 (45%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 75 GSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
GSP LPGP GPPG G PG G+ G +G PG G G G G+ G +GPPG G
Sbjct: 638 GSPGFQ-GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGP 696
Query: 135 R------GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
R G G KG AGA G G +G G+ G PG+ G G GPKG +G+ G G
Sbjct: 697 RGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKG 752
Score = 100 bits (248), Expect = 2e-21
Identities = 53/117 (45%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP G GPPG PGP+G + G G G+ G G G+ G GPPG G +G PG G
Sbjct: 886 PGPSGNAGPPGPPGPAG---KEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGP 942
Query: 144 AGAIGRAGP---------------RGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
AGA G GP RG +G G PG G PGK+GP G GE G PGP
Sbjct: 943 AGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGP 999
Score = 99.8 bits (247), Expect = 3e-21
Identities = 49/101 (48%), Positives = 51/101 (50%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGPQG G PG G GM G GF G DG G G G GE G PG G G+ GP+G
Sbjct: 247 PGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGL 306
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G GR G GP G G G G G GP G G PG PG
Sbjct: 307 PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPG 347
Score = 99.8 bits (247), Expect = 3e-21
Identities = 53/114 (46%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPG---KDGQDGHDGDRGDSGEEGPPGRTGNRGKPGP 140
PG G PG PGA GPSG G G PG G+ G G +GD+G +G PG G +G PGP
Sbjct: 403 PGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGP 462
Query: 141 KGKAGAIGRAGPRGPKGVNGTPGKHGTPGKK---------GPKGKKGEPGLPGP 185
G+ G G G GP G+ G PG+ G PG + GPKG GE G PGP
Sbjct: 463 AGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGP 516
Score = 99.8 bits (247), Expect = 3e-21
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 18/120 (15%)
Query: 84 PGPQGPPGPPGAPGPSGMMGR---MGFPGKDGQDGHDGDRGDSGE---EGPPGRTGNRGK 137
PG GP G PG PGP G+ G+ +G PG+ G+ G G G SGE +GP G +G RG
Sbjct: 937 PGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGP 996
Query: 138 PGPKGK---AGAIGRAGPRGPKGVNGTPGKHGTPGKKG---------PKGKKGEPGLPGP 185
PGP G AG G +G G G G+PG+ G+PG KG P G G PG PGP
Sbjct: 997 PGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP 1056
Score = 99.4 bits (246), Expect = 4e-21
Identities = 54/122 (44%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGK---------------DGQDGHDGDRGDSGEEGP 128
PG QG PG GAPGPSG G GFPG+ +G G+DG +GD+G G
Sbjct: 658 PGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGA 717
Query: 129 PGRTGNRGKPGPKGKAGAIGRAGPR------GPKGVNGTPGKHGTPGKKGPKGKKGEPGL 182
PG G G G G+ GA G GP+ GPKG +G+PGK G G GP G G G
Sbjct: 718 PGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGA 777
Query: 183 PG 184
PG
Sbjct: 778 PG 779
Score = 98.2 bits (243), Expect = 9e-21
Identities = 47/101 (46%), Positives = 55/101 (54%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G +G PGP G PGP G G G G G DG G +G +GE G PG G +G PG G+
Sbjct: 470 GARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRP 529
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G G +G G G+PG G G GP G+ G PG PGP
Sbjct: 530 GEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGP 570
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/117 (45%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE---EGPPG 130
KGSP GP G PG PG G +G G +G PG+ G+ G G G SGE +GP G
Sbjct: 934 KGSP----GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSG 989
Query: 131 RTGNRGKPGPKGK---AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
+G RG PGP G AG G +G G G G+PG+ G+PG KG +G+ G G PG
Sbjct: 990 ASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPG 1046
Score = 97.8 bits (242), Expect = 1e-20
Identities = 55/126 (43%), Positives = 62/126 (49%), Gaps = 24/126 (19%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGK------ 137
PG G PG G PG G+ G G PG DG+ G G G G GPPG G RG+
Sbjct: 523 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 582
Query: 138 PGPKGKAGAIGRAGPR---------GPKGVNGTPGKHGTPGKKGPKGKKGE--------- 179
PGPKG AG G+AG R GP G +G G G PG GP G++GE
Sbjct: 583 PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 642
Query: 180 PGLPGP 185
GLPGP
Sbjct: 643 QGLPGP 648
Score = 97.1 bits (240), Expect = 2e-20
Identities = 51/107 (47%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGD------SGEEGPPGRTGNRGK 137
PGP GP GPPG PG G G G G G +G G RG+ +G GP G G G+
Sbjct: 334 PGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQ 393
Query: 138 PGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
PG KG GA G AG G G G G G G GPKG GEPG PG
Sbjct: 394 PGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPG 440
Score = 97.1 bits (240), Expect = 2e-20
Identities = 48/102 (47%), Positives = 55/102 (53%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG QG PGP G PG +G G G PG G G G RG+ G G G G G GP+G
Sbjct: 640 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
GA G G +G G G PG G PG +G G++G GLPGP
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGP 741
Score = 96.7 bits (239), Expect = 3e-20
Identities = 65/167 (38%), Positives = 68/167 (40%), Gaps = 56/167 (33%)
Query: 70 RDFRKGSPQLVCSLPGPQGPPGPPG-------------------------APGPSGMMGR 104
RD G P LPGP GPPGPPG PGP G G
Sbjct: 131 RDGIPGQP----GLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGP 186
Query: 105 MGFPGKDGQDGHDGDRGDSGEEGPPGRT---GNRGKPGPKGKAGAIGRA---------GP 152
G PG G G G +G GE G PG + G RG PGP GK G G A GP
Sbjct: 187 RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGP 246
Query: 153 RGPKGVNGTPGKHGTPGKK---------------GPKGKKGEPGLPG 184
GP+G G PG G PG K GP G KGEPG PG
Sbjct: 247 PGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPG 293
Score = 96.7 bits (239), Expect = 3e-20
Identities = 51/112 (45%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 80 VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPG 139
V LPG +G G PG PGPSG G+ G G G+ G G G G GPPG +G G PG
Sbjct: 960 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019
Query: 140 PK------GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
+ G GA G G GP G G PG G PG GP GK G+ G GP
Sbjct: 1020 AEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGP 1071
Score = 96.3 bits (238), Expect = 3e-20
Identities = 48/101 (47%), Positives = 53/101 (52%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP G GPPG G G G G PG G G G+RG G G PG G G GP G+
Sbjct: 451 PGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGE 510
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G+ G AGP+G G G PG+ G PG KG G G PG G
Sbjct: 511 RGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDG 551
Score = 95.9 bits (237), Expect = 4e-20
Identities = 50/104 (48%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
GP GP GP GA GP+G G G G+ G+ G G +G G G G G G PG +G +
Sbjct: 1073 GPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPS 1132
Query: 145 GAIGRAGPRGPKGVNGTPGK---HGTPGKKGPKGKKGEPGLPGP 185
GA G AGPRGP G G PGK +G PG GP G +G G GP
Sbjct: 1133 GASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGP 1176
Score = 95.5 bits (236), Expect = 6e-20
Identities = 48/102 (47%), Positives = 52/102 (50%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG GP G PG GPSG G G PG G G G G+SG EG PG G+ G+ G G
Sbjct: 973 PGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGA 1032
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G GP GP G G PG G G G G +GE G GP
Sbjct: 1033 KGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGP 1074
Score = 95.1 bits (235), Expect = 8e-20
Identities = 48/104 (46%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G +G G PGAPG G G G PG+ G G G +GD G+ GP G G+ GK G +G
Sbjct: 707 GAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLT 766
Query: 145 GAIGRAGPR---GPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G IG GP G KG +G G G G +G G +GEPG PGP
Sbjct: 767 GPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Score = 95.1 bits (235), Expect = 8e-20
Identities = 52/113 (46%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP GP G G PG G G G PG G G G G +G GPPG GN G PG KG
Sbjct: 805 PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGA 864
Query: 144 AG------------AIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G A GR GP GP G G PG G GK+G KG +GE G G
Sbjct: 865 RGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAG 917
Score = 94.4 bits (233), Expect = 1e-19
Identities = 50/104 (48%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
GP+GP G G+PGP+G G G G+ G+ G G +G +G G PG G G PGP A
Sbjct: 503 GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP---A 559
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKG---KKGEPGLPGP 185
G GR GP GP G G G G PG KG G K GE G+PGP
Sbjct: 560 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP 603
Score = 94.4 bits (233), Expect = 1e-19
Identities = 47/101 (46%), Positives = 51/101 (50%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG GPPGPPG G G G G G G G G G G G PG+ G RG PG G
Sbjct: 919 PGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP 978
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
+G G+ GP G G G PG G PG GP G+ G G PG
Sbjct: 979 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019
Score = 93.6 bits (231), Expect = 2e-19
Identities = 49/108 (45%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 80 VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPG 139
V PGP+G G PG G G+ G PG G G DG+ G G GP G G RG+ G
Sbjct: 579 VMGFPGPKGAAGEPGKAGERGVPGP---PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQG 635
Query: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTP---GKKGPKGKKGEPGLPG 184
P G G G GP GP G G PG+ G P G GP G +GE G PG
Sbjct: 636 PAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPG 683
Score = 93.6 bits (231), Expect = 2e-19
Identities = 50/122 (40%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Query: 85 GPQGPPGPPGAPG---------------------PSGMMGRMGFPGKDGQDGHDGDRGDS 123
GP GPPG PGAPG P+G +G +G G G G GD+G++
Sbjct: 1040 GPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGET 1099
Query: 124 GEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
GE+G G G+RG G +G G G G +GP G +G G G PG G GK G GLP
Sbjct: 1100 GEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLP 1159
Query: 184 GP 185
GP
Sbjct: 1160 GP 1161
Score = 93.2 bits (230), Expect = 3e-19
Identities = 45/101 (44%), Positives = 51/101 (50%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G GPPGP G GP G G +G G+ G G G G G G PG G G GP G
Sbjct: 329 GAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
GA G+ G +G G G G G PG +GP G +G G PGP
Sbjct: 389 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGP 429
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/109 (43%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG---------RTGNR 135
G +G PGPPGA GP+G G G G G G G+RG+ G G PG G
Sbjct: 596 GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEA 655
Query: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GKPG +G G +G GP G +G G PG+ G G GP G +G G PG
Sbjct: 656 GKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPG 704
Score = 93.2 bits (230), Expect = 3e-19
Identities = 48/107 (44%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G GP GPPGAPG G G +G GK G G G G +G GP G G G GP+G
Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDK 1096
Query: 145 GAIGRAGPRGPK------GVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G G RG K G+ G PG G+PG++GP G G G GP
Sbjct: 1097 GETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP 1143
Score = 91.3 bits (225), Expect = 1e-18
Identities = 49/110 (44%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGD------RGDSGEEGPPGR---TGN 134
PG G PG GA G G+ G GFPG G G G +G+SGE G PG TG
Sbjct: 388 PGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGA 447
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
+G+PGP G G G AG G +G G PG G PG G +G G G PG
Sbjct: 448 KGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Score = 90.9 bits (224), Expect = 1e-18
Identities = 48/109 (44%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGP---- 140
G G PG GAPG GM G G G G G GD G G +G PG+ G RG GP
Sbjct: 713 GAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPP 772
Query: 141 -----KGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G G G +GP GP G G PG G PG GP G G PG G
Sbjct: 773 GPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADG 821
Score = 90.5 bits (223), Expect = 2e-18
Identities = 46/101 (45%), Positives = 52/101 (51%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G GP GP G GP G G G G G G G++GD G +G G +G +G PGP G
Sbjct: 1067 GETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSP 1126
Query: 145 GAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G G +G GP G G PG G PGK G G G G PGP
Sbjct: 1127 GEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGP 1167
Score = 86.7 bits (213), Expect = 3e-17
Identities = 47/110 (42%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPP-------GRTGNRGK 137
GP+GP GP G PG G+ G+ G PG G G G G G P TG
Sbjct: 118 GPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISV 177
Query: 138 PGPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
PGP G +G G GP GP+G G PG+ G PG GP G +G PG PG
Sbjct: 178 PGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPG 227
Score = 86.3 bits (212), Expect = 3e-17
Identities = 48/103 (46%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR---GDSGEEGPPGRTGNRGKPGPK 141
G +G GP G PGP+G G G G G G G R GD GE GPPG G G PG
Sbjct: 761 GVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGAD 820
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
G+ GA G G G KG G PG G G GP G G PG G
Sbjct: 821 GQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKG 863
Score = 74.3 bits (181), Expect = 1e-13
Identities = 40/87 (45%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKG 142
L GP GPPG PG GPS G G G RG G G PG+ G G PGP G
Sbjct: 1116 LQGPPGPPGSPGEQGPS------------GASGPAGPRGPPGSAGAPGKDGLNGLPGPIG 1163
Query: 143 KAGAIGRAGPRGPKGVNGTPGKHGTPG 169
G GR G GP G G PG G PG
Sbjct: 1164 PPGPRGRTGDAGPVGPPGPPGPPGPPG 1190
Score = 73.6 bits (179), Expect = 2e-13
Identities = 41/87 (47%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 85 GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKA 144
G QGPPGPPG+PG G G G G RG G G PG+ G G PGP G
Sbjct: 1115 GLQGPPGPPGSPGEQG---------PSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPP 1165
Query: 145 GAIGR---AGPRGPKGVNGTPGKHGTP 168
G GR AGP GP G G PG G P
Sbjct: 1166 GPRGRTGDAGPVGPPGPPGPPGPPGPP 1192
Score = 67.4 bits (163), Expect = 2e-11
Identities = 35/72 (48%), Positives = 35/72 (48%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PGP G PG G G SG G G PG G G DG G G GPPG G G GP G
Sbjct: 1120 PGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGP 1179
Query: 144 AGAIGRAGPRGP 155
G G GP GP
Sbjct: 1180 PGPPGPPGPPGP 1191
Score = 67.0 bits (162), Expect = 2e-11
Identities = 46/131 (35%), Positives = 51/131 (38%), Gaps = 30/131 (22%)
Query: 84 PGPQGPPGP--PGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPG-- 139
PG + P G P P S G +G G G RG G GPPGR G G+PG
Sbjct: 82 PGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLP 141
Query: 140 ----PKG----------------------KAGAIGRAGPRGPKGVNGTPGKHGTPGKKGP 173
P G G I GP GP G G PG G PG +G
Sbjct: 142 GPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGF 201
Query: 174 KGKKGEPGLPG 184
+G GEPG PG
Sbjct: 202 QGPPGEPGEPG 212
Score = 34.3 bits (77), Expect = 0.16
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR 120
PGP GPPGPPG PS P + HDG R
Sbjct: 1180 PGPPGPPGPPGP--PSAGFDFSFLPQPPQEKAHDGGR 1214
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 559 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 618
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 619 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 678
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 679 GKKGSRGP 686
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 572
Score = 99.0 bits (245), Expect = 5e-21
Identities = 69/163 (42%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 24 PRRELLCSGRPWTWRAAARVTTMIPWVLLAC--ALPCAADPLLGAFARRDFRKGSPQLVC 81
P RE L S AA R + +I LL ++ A P++ RR F+ Q
Sbjct: 217 PHRECLSS-----MPAALRSSQIIALKLLPLLNSVRLAPPPVI---KRRTFQGEQSQ--A 266
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPK 141
S+ GP GPPGPPG GP G G G G G G G +GD G +G GR G RG PG
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GK GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 327 GKHGAKGAPG----IAVAGMKGEPGIPGTKGEKGAEGSPGLPG 365
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 332 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 389
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 390 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 439
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 511 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 570
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 571 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 630
Query: 184 GP 185
GP
Sbjct: 631 GP 632
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/101 (51%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 269 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 328
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G G+ G PG GT G+KG +G G PGL G
Sbjct: 329 HGAKGAPGI-AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLG 368
Score = 93.2 bits (230), Expect = 3e-19
Identities = 52/113 (46%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 69 RRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGP 128
RR+ K SP C P GPPGP G PG G G +G PG+ G G D G GP
Sbjct: 107 RREAPKTSPGCNC----PPGPPGPTGRPGLPGDKGAIGMPGRVGSPG-DAGLSIIGPRGP 161
Query: 129 PGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
PG+ G RG PG G G G+ G GPKG G G G PG +G KG+KG+ G
Sbjct: 162 PGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 498
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 499 KGPRGKPGDMGPPGP 513
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 427 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 486
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 487 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 546
Query: 180 PGLPG 184
G PG
Sbjct: 547 AGSPG 551
Score = 75.1 bits (183), Expect = 8e-14
Identities = 53/164 (32%), Positives = 62/164 (37%), Gaps = 54/164 (32%)
Query: 73 RKGSP-QLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGR 131
R GSP S+ GP+GPPG PG G G G +G DG+ GH G +GD G GPPG+
Sbjct: 144 RVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL---DGKPGHPGPKGDMGLTGPPGQ 200
Query: 132 TGNRGKPGPK-------------------------------------------------- 141
G +G+ G K
Sbjct: 201 PGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQ 260
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G+ GP GP G G G G PG GP G G PG PGP
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGP 304
Score = 35.8 bits (81), Expect = 0.054
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGL 182
R + PK G GP GP G G PG G G G G G+ GL
Sbjct: 106 RRREAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGL 153
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 497 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 556
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 557 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 616
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 617 GKKGSRGP 624
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 404 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 463
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 464 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 510
Score = 99.4 bits (246), Expect = 4e-21
Identities = 59/145 (40%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 69 RRDFRKGSPQLVCSLPGPQGPPG-----------PPGAPGPSGMMGRMGFPGKDGQDGHD 117
RR+ K SP C P PQG PG PPG PG G G G G DG+ GH
Sbjct: 107 RREAPKTSPGCNCP-PAPQGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHP 165
Query: 118 GDRGDSGEEGPPGRTGNRGKPGPKGKAGAI------------------GRAGPRGPKGVN 159
G +GD G GPPG+ G +G+ G KG+ G G GP GP G
Sbjct: 166 GPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHP 225
Query: 160 GTPGKHGTPGKKGPKGKKGEPGLPG 184
G PG G PG GP G KG+PG+ G
Sbjct: 226 GLPGPMGPPGLPGPPGPKGDPGIQG 250
Score = 99.4 bits (246), Expect = 4e-21
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 207 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 266
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 267 HGAKGAPGI----AVAGMKGEPGIPGTKGEKGAEGSPGLPG 303
Score = 99.0 bits (245), Expect = 5e-21
Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE------------EGPPGR 131
PGP G G PG PGP G MG G PG+ G G G++G GE +GPPG
Sbjct: 153 PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGP 212
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSG 191
G PGP G G G GP GP G+ G PG G PG +G G+KGE G+PG G
Sbjct: 213 PG---PPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPG--MPGKH 267
Query: 192 HTKSAFSVAV 201
K A +AV
Sbjct: 268 GAKGAPGIAV 277
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 270 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 327
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 328 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 377
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 449 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 508
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 509 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 568
Query: 184 GP 185
GP
Sbjct: 569 GP 570
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 317 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 376
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 377 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 436
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 437 KGPRGKPGDMGPPGP 451
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 365 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 424
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 425 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 484
Query: 180 PGLPG 184
G PG
Sbjct: 485 AGSPG 489
Score = 87.8 bits (216), Expect = 1e-17
Identities = 50/116 (43%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGR------------MGFPGKDGQDGHDGDRGDSGEEGPPG 130
L GP G PGP G G G G G PG G G G G G GP G
Sbjct: 173 LTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG 232
Query: 131 RTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKG--PKGKKGEPGLPG 184
G G PGPKG G G G +G +G+ G PGKHG G G G KGEPG+PG
Sbjct: 233 PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPG 288
Score = 80.9 bits (198), Expect = 1e-15
Identities = 48/120 (40%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG PP P G+PG +G+ G G G G RG G GP G G G PGPKG
Sbjct: 115 PGCNCPPAPQGSPGDAGL----SIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGD 170
Query: 144 AGAI---GRAGPRGPKGVNGTPGKH---------------GTPGKKGPKGKKGEPGLPGP 185
G G+ GP+G KG G G++ G PG GP G G PGLPGP
Sbjct: 171 MGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGP 230
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 499 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 558
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 559 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 618
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 619 GKKGSRGP 626
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 406 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 465
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 466 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 512
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 272 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 329
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 330 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 379
Score = 97.1 bits (240), Expect = 2e-20
Identities = 53/107 (49%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 78 QLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGK 137
Q S+ GP GPPGPPG GP G G G G G G G +GD G +G GR G RG
Sbjct: 203 QSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGM 262
Query: 138 PGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
PG GK GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 263 PGMPGKHGAKGAPG----IAVAGMKGEPGIPGTKGEKGAEGSPGLPG 305
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 451 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 510
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 511 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 570
Query: 184 GP 185
GP
Sbjct: 571 GP 572
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/101 (51%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 209 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 268
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G G+ G PG GT G+KG +G G PGL G
Sbjct: 269 HGAKGAPGI-AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLG 308
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 319 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 378
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 379 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 438
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 439 KGPRGKPGDMGPPGP 453
Score = 91.7 bits (226), Expect = 8e-19
Identities = 57/149 (38%), Positives = 66/149 (44%), Gaps = 36/149 (24%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE------------------ 125
PGP G G PG PGP G MG G PG+ G G G++G GE
Sbjct: 136 PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQ 195
Query: 126 -------------EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKG 172
+GPPG G PGP G G G GP GP G+ G PG G PG +G
Sbjct: 196 IIALKGEQSQASIQGPPGPPG---PPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 252
Query: 173 PKGKKGEPGLPGPCSCGSGHTKSAFSVAV 201
G+KGE G+PG G K A +AV
Sbjct: 253 YHGRKGERGMPG--MPGKHGAKGAPGIAV 279
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 367 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 426
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 427 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 486
Query: 180 PGLPG 184
G PG
Sbjct: 487 AGSPG 491
Score = 81.3 bits (199), Expect = 1e-15
Identities = 49/138 (35%), Positives = 57/138 (41%), Gaps = 37/138 (26%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG PP G PG G G G G DG+ GH G +GD G GPPG+ G +G+ G KG+
Sbjct: 115 PGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQ 174
Query: 144 AGAI-------------------------------------GRAGPRGPKGVNGTPGKHG 166
G G GP GP G G PG G
Sbjct: 175 CGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG 234
Query: 167 TPGKKGPKGKKGEPGLPG 184
PG GP G KG+PG+ G
Sbjct: 235 PPGLPGPPGPKGDPGIQG 252
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 502 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 561
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 562 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 621
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 622 GKKGSRGP 629
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 409 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 468
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 469 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 515
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 275 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 332
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 333 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 382
Score = 97.8 bits (242), Expect = 1e-20
Identities = 56/116 (48%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 69 RRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGP 128
RR F+ Q S+ GP GPPGPPG GP G G G G G G G +GD G +G
Sbjct: 199 RRTFQGEQSQ--ASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGY 256
Query: 129 PGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GR G RG PG GK GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 257 HGRKGERGMPGMPGKHGAKGAPG----IAVAGMKGEPGIPGTKGEKGAEGSPGLPG 308
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 454 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 513
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 514 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 573
Query: 184 GP 185
GP
Sbjct: 574 GP 575
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/101 (51%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 212 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 271
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G G+ G PG GT G+KG +G G PGL G
Sbjct: 272 HGAKGAPGI-AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLG 311
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 322 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 381
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 382 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 441
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 442 KGPRGKPGDMGPPGP 456
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 370 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 429
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 430 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 489
Query: 180 PGLPG 184
G PG
Sbjct: 490 AGSPG 494
Score = 80.9 bits (198), Expect = 1e-15
Identities = 53/158 (33%), Positives = 60/158 (37%), Gaps = 57/158 (36%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE------------------ 125
PGP G G PG PGP G MG G PG+ G G G++G GE
Sbjct: 136 PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPP 195
Query: 126 -------------------------EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVN- 159
GP G G+ G PGP G G G GP+G G+
Sbjct: 196 VIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 255
Query: 160 -----------GTPGKHGTPGKKG--PKGKKGEPGLPG 184
G PGKHG G G G KGEPG+PG
Sbjct: 256 YHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPG 293
Score = 80.1 bits (196), Expect = 3e-15
Identities = 49/141 (34%), Positives = 57/141 (40%), Gaps = 40/141 (28%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG PP G PG G G G G DG+ GH G +GD G GPPG+ G +G+ G KG+
Sbjct: 115 PGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQ 174
Query: 144 AGAI----------------------------------------GRAGPRGPKGVNGTPG 163
G G GP GP G G PG
Sbjct: 175 CGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 234
Query: 164 KHGTPGKKGPKGKKGEPGLPG 184
G PG GP G KG+PG+ G
Sbjct: 235 PMGPPGLPGPPGPKGDPGIQG 255
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 506 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 565
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 566 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 625
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 626 GKKGSRGP 633
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 413 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 472
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 473 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 519
Score = 99.4 bits (246), Expect = 4e-21
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 216 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 275
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 276 HGAKGAPGI----AVAGMKGEPGIPGTKGEKGAEGSPGLPG 312
Score = 99.0 bits (245), Expect = 5e-21
Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE------------EGPPGR 131
PGP G G PG PGP G MG G PG+ G G G++G GE +GPPG
Sbjct: 162 PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGP 221
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSG 191
G PGP G G G GP GP G+ G PG G PG +G G+KGE G+PG G
Sbjct: 222 PG---PPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPG--MPGKH 276
Query: 192 HTKSAFSVAV 201
K A +AV
Sbjct: 277 GAKGAPGIAV 286
Score = 98.6 bits (244), Expect = 7e-21
Identities = 60/153 (39%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 69 RRDFRKGSPQLVC--SLPGPQGPPGPPGAPG-----------PSGMMGRMGFPG------ 109
RR+ K SP C + GP G PG PG+PG P G G GFPG
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIG 166
Query: 110 KDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAI------------------GRAG 151
DG+ GH G +GD G GPPG+ G +G+ G KG+ G G G
Sbjct: 167 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPG 226
Query: 152 PRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
P GP G G PG G PG GP G KG+PG+ G
Sbjct: 227 PSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 259
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 279 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 336
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 337 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 386
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 458 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 517
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 518 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 577
Query: 184 GP 185
GP
Sbjct: 578 GP 579
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 326 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 385
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 386 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 445
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 446 KGPRGKPGDMGPPGP 460
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 374 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 433
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 434 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 493
Query: 180 PGLPG 184
G PG
Sbjct: 494 AGSPG 498
Score = 87.8 bits (216), Expect = 1e-17
Identities = 50/116 (43%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGR------------MGFPGKDGQDGHDGDRGDSGEEGPPG 130
L GP G PGP G G G G G PG G G G G G GP G
Sbjct: 182 LTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG 241
Query: 131 RTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKG--PKGKKGEPGLPG 184
G G PGPKG G G G +G +G+ G PGKHG G G G KGEPG+PG
Sbjct: 242 PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPG 297
Score = 33.1 bits (74), Expect = 0.35
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKK--GPKGKKGEPGLPG 184
R + PK G +GP G G PG G G GP+G G+PG G
Sbjct: 106 RRREAPKTSPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRG 157
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 112 bits (281), Expect = 3e-25
Identities = 64/147 (43%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 518 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 577
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKG----- 172
G G+PGP G G IG GP GPKG G+ PG HG PG KG
Sbjct: 578 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 637
Query: 173 -------PKGKKGEPGLPG---PCSCG 189
PKG KG+ G PG PC G
Sbjct: 638 GKKGSRGPKGDKGDQGAPGLDAPCPLG 664
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 425 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 484
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 485 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 531
Score = 99.4 bits (246), Expect = 4e-21
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 228 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 287
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 288 HGAKGAPGI----AVAGMKGEPGIPGTKGEKGAEGSPGLPG 324
Score = 99.0 bits (245), Expect = 5e-21
Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGE------------EGPPGR 131
PGP G G PG PGP G MG G PG+ G G G++G GE +GPPG
Sbjct: 174 PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGP 233
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSG 191
G PGP G G G GP GP G+ G PG G PG +G G+KGE G+PG G
Sbjct: 234 PG---PPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPG--MPGKH 288
Query: 192 HTKSAFSVAV 201
K A +AV
Sbjct: 289 GAKGAPGIAV 298
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 291 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 348
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 349 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 398
Score = 96.7 bits (239), Expect = 3e-20
Identities = 55/131 (41%), Positives = 66/131 (50%), Gaps = 22/131 (16%)
Query: 73 RKGSP-QLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGR 131
R GSP S+ GP+GPPG PG G G G +G DG+ GH G +GD G GPPG+
Sbjct: 144 RVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL---DGKPGHPGPKGDMGLTGPPGQ 200
Query: 132 TGNRGKPGPKGKAGAI------------------GRAGPRGPKGVNGTPGKHGTPGKKGP 173
G +G+ G KG+ G G GP GP G G PG G PG GP
Sbjct: 201 PGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP 260
Query: 174 KGKKGEPGLPG 184
G KG+PG+ G
Sbjct: 261 PGPKGDPGIQG 271
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 470 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 529
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 530 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 589
Query: 184 GP 185
GP
Sbjct: 590 GP 591
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 338 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 397
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 398 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 457
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 458 KGPRGKPGDMGPPGP 472
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 386 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 445
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 446 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 505
Query: 180 PGLPG 184
G PG
Sbjct: 506 AGSPG 510
Score = 87.8 bits (216), Expect = 1e-17
Identities = 50/116 (43%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 83 LPGPQGPPGPPGAPGPSGMMGR------------MGFPGKDGQDGHDGDRGDSGEEGPPG 130
L GP G PGP G G G G G PG G G G G G GP G
Sbjct: 194 LTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG 253
Query: 131 RTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKG--PKGKKGEPGLPG 184
G G PGPKG G G G +G +G+ G PGKHG G G G KGEPG+PG
Sbjct: 254 PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPG 309
Score = 30.4 bits (67), Expect = 2.3
Identities = 17/48 (35%), Positives = 20/48 (41%)
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGL 182
R + PK G +GP G G PG G G G G G+ GL
Sbjct: 106 RRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL 153
>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
Length = 688
Score = 112 bits (281), Expect = 3e-25
Identities = 58/128 (45%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 74 KGSPQL-VCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRT 132
KG+P V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +
Sbjct: 530 KGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGAS 589
Query: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKGPKGKK 177
G G+PGP G G IG GP GPKG G+ PG HG PG KG +G++
Sbjct: 590 GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGER 649
Query: 178 GEPGLPGP 185
G+ G GP
Sbjct: 650 GKKGSRGP 657
Score = 107 bits (268), Expect = 1e-23
Identities = 54/107 (50%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 437 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 496
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
G G G G KG G G+ G+PG+KG G+KG PGLPGP
Sbjct: 497 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 543
Score = 99.0 bits (245), Expect = 5e-21
Identities = 69/163 (42%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 24 PRRELLCSGRPWTWRAAARVTTMIPWVLLAC--ALPCAADPLLGAFARRDFRKGSPQLVC 81
P RE L S AA R + +I LL ++ A P++ RR F+ Q
Sbjct: 188 PHRECLSS-----MPAALRSSQIIALKLLPLLNSVRLAPPPVI---KRRTFQGEQSQ--A 237
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPK 141
S+ GP GPPGPPG GP G G G G G G G +GD G +G GR G RG PG
Sbjct: 238 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 297
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GK GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 298 GKHGAKGAPG----IAVAGMKGEPGIPGTKGEKGAEGSPGLPG 336
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 303 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 360
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 361 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 410
Score = 96.7 bits (239), Expect = 3e-20
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDG---------DRGDSGE--------- 125
PGPQGPPG G PG G G G PG+ G+ G G + G+ G
Sbjct: 482 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLP 541
Query: 126 --EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
EGPPG G +G PGPKG+AG G G +G +G G G G PG G G+ G PG P
Sbjct: 542 GPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 601
Query: 184 GP 185
GP
Sbjct: 602 GP 603
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/101 (51%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 240 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 299
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G G+ G PG GT G+KG +G G PGL G
Sbjct: 300 HGAKGAPGI-AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLG 339
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 350 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 409
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 410 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 469
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 470 KGPRGKPGDMGPPGP 484
Score = 88.2 bits (217), Expect = 9e-18
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 85 GPQGPPGPPGAPGPSGM-------------------MGRMGFPGKDGQDGHDGDRGDSGE 125
GP GP G G PG M MG G PG+ G G G G GE
Sbjct: 398 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 457
Query: 126 EGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTP------GKHGTPGKKGPKGKKGE 179
G PG G+ G+ GP+GK G +G GP+GP G +G P G G+PG+KG KG+ G+
Sbjct: 458 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 517
Query: 180 PGLPG 184
G PG
Sbjct: 518 AGSPG 522
Score = 85.1 bits (209), Expect = 8e-17
Identities = 56/158 (35%), Positives = 65/158 (41%), Gaps = 42/158 (26%)
Query: 69 RRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGE 125
RR+ K SP C P QGP G PG PG G G GFPG DG+ GH G +GD G
Sbjct: 107 RREAPKTSPGCNCP-PAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGL 165
Query: 126 EGPPGRTGNRGKPGPKGKAG--------------------------------------AI 147
GPPG+ G +G+ G KG+ G I
Sbjct: 166 TGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVI 225
Query: 148 GRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
R +G + G G PG GP G G PGLPGP
Sbjct: 226 KRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGP 263
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGT---PGKKGPKGKKGEPGLPGP 185
R + PK G +GP G G PG+ GT PG GP G G+PG PGP
Sbjct: 106 RRREAPKTSPGCNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGLDGKPGHPGP 159
>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
Length = 702
Score = 112 bits (281), Expect = 3e-25
Identities = 64/145 (44%), Positives = 72/145 (49%), Gaps = 32/145 (22%)
Query: 75 GSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
GSP V LPGP+GPPGPPG G G G G G G+ G G++GD G G PG +G
Sbjct: 548 GSP--VPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGL 605
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGT---------------PGKHGTPGKKG------- 172
G+PGP G G IG GP GPKG G+ PG HG PG KG
Sbjct: 606 DGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK 665
Query: 173 -----PKGKKGEPGLPG---PCSCG 189
PKG KG+ G PG PC G
Sbjct: 666 KGSRGPKGDKGDQGAPGLDAPCPLG 690
Score = 100 bits (249), Expect = 2e-21
Identities = 53/107 (49%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 84 PGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
PG G GPPGAPG G G +G PG G DG G RG G+ GPPG G GK GP G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGT--PGKKGPKGKKGEPGL---PGP 185
G G G G KG G G+ G+ PG GP+G G PGL PGP
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGP 572
Score = 99.0 bits (245), Expect = 5e-21
Identities = 69/163 (42%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 24 PRRELLCSGRPWTWRAAARVTTMIPWVLLAC--ALPCAADPLLGAFARRDFRKGSPQLVC 81
P RE L S AA R + +I LL ++ A P++ RR F+ Q
Sbjct: 217 PHRECLSS-----MPAALRSSQIIALKLLPLLNSVRLAPPPVI---KRRTFQGEQSQ--A 266
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPK 141
S+ GP GPPGPPG GP G G G G G G G +GD G +G GR G RG PG
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GK GA G G V G G+ G PG KG KG +G PGLPG
Sbjct: 327 GKHGAKGAPG----IAVAGMKGEPGIPGTKGEKGAEGSPGLPG 365
Score = 98.2 bits (243), Expect = 9e-21
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDS--GEEGPPGR 131
KG+P + ++ G +G PG PG G G G G PG GQ G GD G+S G G PG
Sbjct: 332 KGAPGI--AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGP 389
Query: 132 TGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
G G PGPKG+AG G+ GP G G G G G G GPKG KGEPG
Sbjct: 390 PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG 439
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/101 (51%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 87 QGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGK 143
QGPPGPPG PGPSG +G G PG G G G +GD G +G GR G RG PG GK
Sbjct: 269 QGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGK 328
Query: 144 AGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
GA G G G+ G PG GT G+KG +G G PGL G
Sbjct: 329 HGAKGAPGI-AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLG 368
Score = 93.2 bits (230), Expect = 3e-19
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 91 GPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRA 150
GPPG PG G G G PG+ G+ G G G GE+GP G+ G+ G PGP+G G +
Sbjct: 464 GPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG---KD 520
Query: 151 GPRGPKGVNGTPGKHGTPGKKGPKGKKGE-----PGLPGP 185
GP G KG NG PG +PG+KG KG+ G+ PGLPGP
Sbjct: 521 GPPGVKGENGHPG---SPGEKGEKGETGQAGSPVPGLPGP 557
Score = 92.0 bits (227), Expect = 6e-19
Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 82 SLPGPQGPPGPPGAPGPSGMMGRMGFPGK---DGQDGHDGDRGDSGEEGPPGRTGNRGKP 138
S+ G +G PGPPG PGP G G G G+ GQ G G+RG +GE+GP G G++G+P
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 139 -------------------------GPKGKAGAIGRAGP---RGPKGVNGTPGKHGTPGK 170
GP G G IG G G KG G PG G G+
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE 498
Query: 171 KGPKGKKGEPGLPGP 185
KGP+GK G+ G PGP
Sbjct: 499 KGPRGKPGDMGPPGP 513
Score = 88.2 bits (217), Expect = 9e-18
Identities = 51/111 (45%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 84 PGPQGPPG---PPGA------PGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
PGPQGPPG PPG PG G G G G+ G G G EGPPG G
Sbjct: 511 PGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP----VPGLPGPEGPPGPPGL 566
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
+G PGPKG+AG G G +G +G G G G PG G G+ G PG PGP
Sbjct: 567 QGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGP 617
Score = 87.0 bits (214), Expect = 2e-17
Identities = 51/115 (44%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 69 RRDFRKGSPQLVC--SLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEE 126
RR+ K SP C + GP G PG PG G GM GR+G PG D G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPG-------DAGLSIIGPR 159
Query: 127 GPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPG 181
GPPG+ G RG PG G G G+ G GPKG G G G PG +G KG+KG+ G
Sbjct: 160 GPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 75.1 bits (183), Expect = 8e-14
Identities = 53/164 (32%), Positives = 62/164 (37%), Gaps = 54/164 (32%)
Query: 73 RKGSP-QLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGR 131
R GSP S+ GP+GPPG PG G G G +G DG+ GH G +GD G GPPG+
Sbjct: 144 RVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL---DGKPGHPGPKGDMGLTGPPGQ 200
Query: 132 TGNRGKPGPK-------------------------------------------------- 141
G +G+ G K
Sbjct: 201 PGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQ 260
Query: 142 GKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
G+ GP GP G G G G PG GP G G PG PGP
Sbjct: 261 GEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGP 304
Score = 30.4 bits (67), Expect = 2.3
Identities = 17/48 (35%), Positives = 20/48 (41%)
Query: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGL 182
R + PK G +GP G G PG G G G G G+ GL
Sbjct: 106 RRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,674,335
Number of Sequences: 37866
Number of extensions: 1245375
Number of successful extensions: 44964
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 7525
Number of HSP's gapped (non-prelim): 8691
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.