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Search of human proteins with 14150185
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 490 e-139
gi|56790947 zinc finger, BED domain containing 2 [Homo sapiens] 172 2e-43
gi|122937321 UNC homeobox [Homo sapiens] 46 2e-05
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 45 7e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 9e-05
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|148746195 trichohyalin [Homo sapiens] 44 2e-04
gi|45827729 scribble isoform b [Homo sapiens] 43 2e-04
gi|45827731 scribble isoform a [Homo sapiens] 43 2e-04
gi|21361517 UBX domain protein 1 [Homo sapiens] 43 2e-04
gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 43 3e-04
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 43 3e-04
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 43 3e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 43 3e-04
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 42 3e-04
gi|239742598 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|122937219 F-box protein 41 [Homo sapiens] 41 8e-04
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 41 0.001
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 40 0.001
gi|239754052 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 40 0.002
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 40 0.002
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens] 40 0.002
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 40 0.002
gi|40353727 synaptopodin isoform A [Homo sapiens] 39 0.003
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 39 0.003
gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo ... 39 0.004
gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo ... 39 0.004
>gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
Length = 234
Score = 490 bits (1261), Expect = e-139
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MRSGEPACTMDQARGLDDAAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPG 60
MRSGEPACTMDQARGLDDAAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPG
Sbjct: 1 MRSGEPACTMDQARGLDDAAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPG 60
Query: 61 HPSGHWATCRLCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPG 120
HPSGHWATCRLCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPG
Sbjct: 61 HPSGHWATCRLCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPG 120
Query: 121 PAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQ 180
PAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQ
Sbjct: 121 PAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQ 180
Query: 181 ARRELQAEREALQARLRDVSRREGALGWAPAAPPPLKDDPEGDRDGCVITKVLL 234
ARRELQAEREALQARLRDVSRREGALGWAPAAPPPLKDDPEGDRDGCVITKVLL
Sbjct: 181 ARRELQAEREALQARLRDVSRREGALGWAPAAPPPLKDDPEGDRDGCVITKVLL 234
>gi|56790947 zinc finger, BED domain containing 2 [Homo sapiens]
Length = 218
Score = 172 bits (436), Expect = 2e-43
Identities = 88/168 (52%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Query: 27 PGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFHAGT 86
P + PTP P + G +SEAW YFHLAP R GH +ATCRLCG QV RGPG + GT
Sbjct: 37 PFVSAMPTPMPHNK-GTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGT 95
Query: 87 SALWRHLRSAHRRELESSGAGSSPPAA-PCPPPPGPAAAPEGDWARLLEQMGALAVRGSR 145
+ALW+HL+S HR ELE SG G + P P P EG+W RLLEQ+G +A+ S+
Sbjct: 96 TALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQ 155
Query: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
RE+E+ RRE AVE ERA+E+R RAL+E ERA + + +++AE+EA Q
Sbjct: 156 REKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQ 203
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 46.2 bits (108), Expect = 2e-05
Identities = 37/107 (34%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 19 AAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGR 78
AA +GG GL PAP PP P A F G G P +A R + V
Sbjct: 394 AALKGGA--GLEPAPKDAPPAPAVPPAPPAQASFGAFSGPGGAPDSAFA--RRSPDAVA- 448
Query: 79 GPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAP 125
PG A A +R L SA E + A P PPPP P+ P
Sbjct: 449 SPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRP 495
Score = 30.4 bits (67), Expect = 1.4
Identities = 31/112 (27%), Positives = 38/112 (33%), Gaps = 20/112 (17%)
Query: 18 DAAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLC---GE 74
D+ + GG GL P P PP P + A G AP PG P TC +
Sbjct: 234 DSDSGGG---GLSPEPPEPPPPAAKGPGAHASGAAGTAPAPPGEPPAP-GTCDPAFYPSQ 289
Query: 75 QVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPE 126
+ G GP G R + A P AA G A P+
Sbjct: 290 RSGAGPQPRPG-------------RPADKDAASCGPGAAVAAVERGAAGLPK 328
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 44.7 bits (104), Expect = 7e-05
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 13/150 (8%)
Query: 85 GTSALWRHLRSAHRRELESSGAGSSPPA----APCPPPPGPAAAPEGDWARLLEQMGALA 140
G S+ L R ++G SPP A P PGP EG L G
Sbjct: 654 GPSSSLLSLPGLKSRGSRAAGGAPSPPPPVRRASAGPAPGPVVTAEGLHPSLPSPTGNST 713
Query: 141 VRGS-------RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
GS +ER+ + +E ++ ER ER+++ + E++ + ++E + +++ +
Sbjct: 714 PLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQKQEKK 773
Query: 194 ARLRDVSRREGALGWAPAAPPPLKDDPEGD 223
A+ R +S R A G P P D P +
Sbjct: 774 AQGRKLSLRRKADG--PPGPHDGGDRPSAE 801
Score = 30.0 bits (66), Expect = 1.8
Identities = 36/112 (32%), Positives = 39/112 (34%), Gaps = 29/112 (25%)
Query: 21 ARGGQCPGLGP---APTPTP----PGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCG 73
AR PG G PT TP PG L A LAP +PG T R
Sbjct: 138 ARPSPAPGPGTPTGTPTRTPSRTAPGALTAKPP-------LAP-KPGTTVASGVTARSAS 189
Query: 74 EQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAP 125
QV G G A TSA S+G P+ P P G AP
Sbjct: 190 GQVTGGHGAAAATSA--------------SAGQAPEDPSGPGTGPSGTCEAP 227
Score = 29.6 bits (65), Expect = 2.3
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 132 LLEQMGALAVRGSRRER-ELERRELAVEQGERALERRRRALQEEERAAAQARRELQAERE 190
L+E+ A ++ R R EL+ R G RA+ RR Q+ + + L +
Sbjct: 609 LIERENAAQLKKWRETRGELQYRPSRRLHGSRAIHEERRR-QQPPLGPSSSLLSLPGLK- 666
Query: 191 ALQARLRDVSRREGALGWAPAAPPPLKDDPEGDRDGCVIT 230
SR A G AP+ PPP++ G G V+T
Sbjct: 667 ---------SRGSRAAGGAPSPPPPVRRASAGPAPGPVVT 697
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 44.3 bits (103), Expect = 9e-05
Identities = 38/122 (31%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Query: 111 PAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGS-----------------RRERELERR 153
P AP PP P P P G+W G RG RR++
Sbjct: 405 PPAPKPPLPPPHRGPAGNWG----PPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEI 460
Query: 154 ELAVEQGERALERRRRALQEEERAA-AQARRELQAEREALQARLRDVSRREGALGWAPAA 212
LAVE+ R E R +QEE RAA A+ + L + A RL+ A PA
Sbjct: 461 SLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAP 520
Query: 213 PP 214
PP
Sbjct: 521 PP 522
Score = 30.0 bits (66), Expect = 1.8
Identities = 29/112 (25%), Positives = 36/112 (32%), Gaps = 23/112 (20%)
Query: 30 GPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFHAG---- 85
GP P P PPG S+ P + P T +L G + GR P G
Sbjct: 860 GPRPLPWPPG------SDEVAKIQTPPPKKEPPKEE--TAQLTGPEAGRKPARGVGSGGQ 911
Query: 86 ----------TSALWRHLRSAHRRELESSGAGSSP-PAAPCPPPPGPAAAPE 126
T W + RR + G+ P A P PP P E
Sbjct: 912 GPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEE 963
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 43.5 bits (101), Expect = 2e-04
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 123 AAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERA----LERRRRALQEEERAA 178
AA G W L+++ A RRERE ++ A+EQG RA +E RR EER A
Sbjct: 375 AAAHGQWE--LQRVHAK----QRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREA 428
Query: 179 AQARRELQAEREALQARLRDVSRREGAL 206
A+ RR+ Q ER + R R+++ R+G L
Sbjct: 429 AR-RRQRQYERS--EERRRELAERQGLL 453
Score = 35.0 bits (79), Expect = 0.055
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 132 LLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREA 191
L E+ G L R R ER L Q E+ L++R LQE A Q RRE +A+R A
Sbjct: 446 LAERQGLL--RRERAERAAREDRLRKLQQEQNLKQREEGLQEGRERAEQIRRE-RAQRAA 502
Query: 192 ---------LQARLRDVSRREGA 205
LQ R++SR E A
Sbjct: 503 RAKQRQEGQLQREKRELSRAERA 525
Score = 33.1 bits (74), Expect = 0.21
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 145 RRERELER-----RELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
RR+R+ ER RELA QG ER RA +E+ Q + L+ E LQ
Sbjct: 431 RRQRQYERSEERRRELAERQGLLRRERAERAAREDRLRKLQQEQNLKQREEGLQ 484
Score = 29.3 bits (64), Expect = 3.0
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQA-----RRELQAEREALQARL 196
RRER +R A ++ E L+R +R L ERA +A R+ + ERE L++ L
Sbjct: 494 RRERA-QRAARAKQRQEGQLQREKRELSRAERARHEALLQGRTRQQRQEREGLRSSL 549
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 16/70 (22%)
Query: 150 LERRELAVEQGE----RALERRRRALQEEERAAAQARRELQA------------EREALQ 193
LE+R A Q E A +RR R +E++RA Q RR A EREA +
Sbjct: 371 LEQRAAAHGQWELQRVHAKQRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREAAR 430
Query: 194 ARLRDVSRRE 203
R R R E
Sbjct: 431 RRQRQYERSE 440
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 43.5 bits (101), Expect = 2e-04
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 123 AAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERA----LERRRRALQEEERAA 178
AA G W L+++ A RRERE ++ A+EQG RA +E RR EER A
Sbjct: 377 AAAHGQWE--LQRVHAK----QRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREA 430
Query: 179 AQARRELQAEREALQARLRDVSRREGAL 206
A+ RR+ Q ER + R R+++ R+G L
Sbjct: 431 AR-RRQRQYERS--EERRRELAERQGLL 455
Score = 35.0 bits (79), Expect = 0.055
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 132 LLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREA 191
L E+ G L R R ER L Q E+ L++R LQE A Q RRE +A+R A
Sbjct: 448 LAERQGLL--RRERAERAAREDRLRKLQQEQNLKQREEGLQEGRERAEQIRRE-RAQRAA 504
Query: 192 ---------LQARLRDVSRREGA 205
LQ R++SR E A
Sbjct: 505 RAKQRQEGQLQREKRELSRAERA 527
Score = 33.1 bits (74), Expect = 0.21
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 145 RRERELER-----RELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
RR+R+ ER RELA QG ER RA +E+ Q + L+ E LQ
Sbjct: 433 RRQRQYERSEERRRELAERQGLLRRERAERAAREDRLRKLQQEQNLKQREEGLQ 486
Score = 29.3 bits (64), Expect = 3.0
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQA-----RRELQAEREALQARL 196
RRER +R A ++ E L+R +R L ERA +A R+ + ERE L++ L
Sbjct: 496 RRERA-QRAARAKQRQEGQLQREKRELSRAERARHEALLQGRTRQQRQEREGLRSSL 551
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 16/70 (22%)
Query: 150 LERRELAVEQGE----RALERRRRALQEEERAAAQARRELQA------------EREALQ 193
LE+R A Q E A +RR R +E++RA Q RR A EREA +
Sbjct: 373 LEQRAAAHGQWELQRVHAKQRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREAAR 432
Query: 194 ARLRDVSRRE 203
R R R E
Sbjct: 433 RRQRQYERSE 442
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 43.5 bits (101), Expect = 2e-04
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 123 AAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERA----LERRRRALQEEERAA 178
AA G W L+++ A RRERE ++ A+EQG RA +E RR EER A
Sbjct: 377 AAAHGQWE--LQRVHAK----QRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREA 430
Query: 179 AQARRELQAEREALQARLRDVSRREGAL 206
A+ RR+ Q ER + R R+++ R+G L
Sbjct: 431 AR-RRQRQYERS--EERRRELAERQGLL 455
Score = 35.0 bits (79), Expect = 0.055
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 132 LLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREA 191
L E+ G L R R ER L Q E+ L++R LQE A Q RRE +A+R A
Sbjct: 448 LAERQGLL--RRERAERAAREDRLRKLQQEQNLKQREEGLQEGRERAEQIRRE-RAQRAA 504
Query: 192 ---------LQARLRDVSRREGA 205
LQ R++SR E A
Sbjct: 505 RAKQRQEGQLQREKRELSRAERA 527
Score = 33.1 bits (74), Expect = 0.21
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 145 RRERELER-----RELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
RR+R+ ER RELA QG ER RA +E+ Q + L+ E LQ
Sbjct: 433 RRQRQYERSEERRRELAERQGLLRRERAERAAREDRLRKLQQEQNLKQREEGLQ 486
Score = 29.3 bits (64), Expect = 3.0
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQA-----RRELQAEREALQARL 196
RRER +R A ++ E L+R +R L ERA +A R+ + ERE L++ L
Sbjct: 496 RRERA-QRAARAKQRQEGQLQREKRELSRAERARHEALLQGRTRQQRQEREGLRSSL 551
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 16/70 (22%)
Query: 150 LERRELAVEQGE----RALERRRRALQEEERAAAQARRELQA------------EREALQ 193
LE+R A Q E A +RR R +E++RA Q RR A EREA +
Sbjct: 373 LEQRAAAHGQWELQRVHAKQRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREAAR 432
Query: 194 ARLRDVSRRE 203
R R R E
Sbjct: 433 RRQRQYERSE 442
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 133 LEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREAL 192
L ++ +R R+E E +++ L EQ R + R Q+EER Q RRE Q ER
Sbjct: 278 LRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQ 337
Query: 193 QARLRDVSRREGAL 206
Q R RRE L
Sbjct: 338 QLRREQEERREQQL 351
Score = 43.5 bits (101), Expect = 2e-04
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 134 EQMGALAVRGSRRERELERRE--LAVEQGERALERRRRALQEEERAAAQARRELQAEREA 191
EQ + RRE++ ERRE L EQ ER ++ RR QEEER Q RRE + ER
Sbjct: 316 EQQEERREQQERREQQEERREQQLRREQEERREQQLRRE-QEEERREQQLRREQEEERRE 374
Query: 192 LQARLRDVSRREGAL 206
Q R RRE L
Sbjct: 375 QQLRREQQLRREQQL 389
Score = 39.7 bits (91), Expect = 0.002
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 145 RRERELERRE--LAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRR 202
RRE+E ERRE L EQ E E++ R QEEER Q RRE Q RE Q R RR
Sbjct: 340 RREQE-ERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQ-QLRREQQLRR 397
Query: 203 EGAL 206
E L
Sbjct: 398 EQQL 401
Score = 37.7 bits (86), Expect = 0.009
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 128 DWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQA 187
DW + E+ R E+E +++L +Q E ER + L+EEER Q RRE Q
Sbjct: 456 DWLKREEET-------ERHEQERRKQQLKRDQEEERRERWLK-LEEEERREQQERREQQL 507
Query: 188 EREALQARLRDVSRRE 203
RE + R + + R+E
Sbjct: 508 RREQEERREQRLKRQE 523
Score = 37.0 bits (84), Expect = 0.015
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 145 RRERELERRELAVEQGERALERR---RRALQEEERAAAQARRELQAEREALQARLRDVSR 201
RRE++L R++ E+ E+ ERR R Q+EER Q RRE + RE R ++ R
Sbjct: 301 RREQQLRRKQ-EEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEER 359
Query: 202 REGAL 206
RE L
Sbjct: 360 REQQL 364
Score = 37.0 bits (84), Expect = 0.015
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 145 RRERELERRE--LAVEQGER--ALERRRRALQEEERAAAQARRELQAEREALQARLR 197
+R++E ERRE L +E+ ER ERR + L+ E+ + R + Q E E LQ RLR
Sbjct: 477 KRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLR 533
Score = 36.6 bits (83), Expect = 0.019
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 145 RRERELERRELA-VEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
R E+ L+R E+ +EQ ER +R +R EEER + E Q ER Q R RRE
Sbjct: 597 RLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERRE 656
Query: 204 GAL 206
L
Sbjct: 657 QRL 659
Score = 35.8 bits (81), Expect = 0.033
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAA-----QARRELQAEREALQARLRDV 199
RR++E ERRE +Q ER ++ RR QEE R + RRE Q RE + R
Sbjct: 307 RRKQEEERRE---QQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ 363
Query: 200 SRRE 203
RRE
Sbjct: 364 LRRE 367
Score = 35.4 bits (80), Expect = 0.042
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEE--RAAAQARRELQAEREALQARLRDVSRR 202
RRE+E ERRE + + E+ ERR + L+ E+ R Q RRE Q RE Q R RR
Sbjct: 352 RREQEEERREQQLRR-EQEEERREQQLRREQQLRREQQLRREQQLRREQ-QLRREQQLRR 409
Query: 203 EGAL 206
E L
Sbjct: 410 EQQL 413
Score = 35.0 bits (79), Expect = 0.055
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 133 LEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREAL 192
LEQ R R E E ERR+ ++ E+ ERR++ L+ E++ + R + + E E L
Sbjct: 610 LEQEERREQRLKREEPEEERRQQLLKSEEQE-ERRQQQLRREQQERREQRLKREEEEERL 668
Query: 193 QARLR---DVSRREGAL 206
+ RL+ + RRE L
Sbjct: 669 EQRLKREHEEERREQEL 685
Score = 34.3 bits (77), Expect = 0.095
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 145 RRERELERRELAVEQGERALERRRRAL---QEEERAAAQARRELQAEREALQARLRDVSR 201
R E+E ERRE +++ E ERR++ L ++EER Q RRE Q RE R + R
Sbjct: 609 RLEQE-ERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEER 667
Query: 202 REGAL 206
E L
Sbjct: 668 LEQRL 672
Score = 33.9 bits (76), Expect = 0.12
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 142 RGSRRERELER---RELAVEQGERAL---ERRRRALQEEERAAAQARRELQAEREALQAR 195
R RR +E ER ++ ++Q E L ER +R LQE ER + ELQ E E L
Sbjct: 1008 REKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYRE-EEELQQEEEQLLGE 1066
Query: 196 LRDVSRRE 203
R+ RR+
Sbjct: 1067 ERETRRRQ 1074
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEE-RAAAQARRELQAEREALQARLRDVSRRE 203
RRE+E ERRE + + E+ L R ++ +E++ R Q RRE Q RE Q R RRE
Sbjct: 365 RREQEEERREQQLRR-EQQLRREQQLRREQQLRREQQLRREQQLRREQ-QLRREQQLRRE 422
Query: 204 GAL 206
L
Sbjct: 423 QQL 425
Score = 33.1 bits (74), Expect = 0.21
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 142 RGSRRERELERRE----LAVEQGERALERRRRALQEEE----RAAAQARRELQAEREALQ 193
R R E++ +RRE + E+ E+ +R L++EE Q +RELQ E E L+
Sbjct: 220 RKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLR 279
Query: 194 ARLRDVSRRE 203
R RRE
Sbjct: 280 KLERQELRRE 289
Score = 33.1 bits (74), Expect = 0.21
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEE-RAAAQARRELQAEREALQARLRDVSRRE 203
RRE++L RRE E+ E+ L R ++ +E++ R Q RRE Q RE Q R RRE
Sbjct: 359 RREQQL-RREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQ-QLRREQQLRRE 416
Query: 204 GAL 206
L
Sbjct: 417 QQL 419
Score = 33.1 bits (74), Expect = 0.21
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 139 LAVRGSRRERELERRE--LAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARL 196
L + R + ERRE L EQ ER E+R + +EEER + R E Q RE + R
Sbjct: 489 LKLEEEERREQQERREQQLRREQEERR-EQRLKRQEEEERLQQRLRSEQQLRREQEERRE 547
Query: 197 RDVSRRE 203
+ + R E
Sbjct: 548 QLLKREE 554
Score = 33.1 bits (74), Expect = 0.21
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 142 RGSRRERELER---RELAVEQGERAL-----ERRRRALQEEERAAAQARRELQAEREALQ 193
R +RR +ELER +E ++Q E L E+RRR QE ER + ELQ E E L
Sbjct: 1068 RETRRRQELERQYRKEEELQQEEEQLLREEPEKRRR--QERERQCRE-EEELQQEEEQLL 1124
Query: 194 ARLRDVSRRE 203
R+ RR+
Sbjct: 1125 REEREKRRRQ 1134
Score = 32.7 bits (73), Expect = 0.28
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 145 RRERELERR-----ELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDV 199
RR +ELER+ EL E+ + E + + QE ER Q R E + +R+ + R RD
Sbjct: 1161 RRRQELERQYREEEELQQEEEQLLREEQEKRRQERER---QYREEEELQRQKRKQRYRDE 1217
Query: 200 SRREG-ALGWAPAAPPPLKDD 219
+R W P ++D+
Sbjct: 1218 DQRSDLKWQWEPEKENAVRDN 1238
Score = 32.0 bits (71), Expect = 0.47
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 141 VRGSRRERELERRELAVEQGERALERRRRAL--QEEERAAAQARRELQAEREALQARLRD 198
++ E L++R + +Q R E RR L +EEE+ Q RRE + +RE + R +
Sbjct: 519 LKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQL 578
Query: 199 VSRRE 203
+ R E
Sbjct: 579 LKREE 583
Score = 31.2 bits (69), Expect = 0.80
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 145 RRERELERRE--LAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSR 201
RRE++ ERRE L E+ E LE+R + EEER R + AE E QAR R SR
Sbjct: 648 RREQQ-ERREQRLKREEEEERLEQRLKREHEEER-----REQELAEEEQEQARERIKSR 700
Score = 31.2 bits (69), Expect = 0.80
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARL 196
RRE+ L+R E + ER +R +R +EE R A E + RE +++R+
Sbjct: 654 RREQRLKREE----EEERLEQRLKREHEEERREQELAEEEQEQARERIKSRI 701
Score = 31.2 bits (69), Expect = 0.80
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 142 RGSRRERELERRELAVEQGERALERRRRA--LQEEERAAA--QARRELQAEREALQARLR 197
R RRERE +EL + E L+RR RA LQEEE Q RR Q +R + R +
Sbjct: 821 RRQRRERE---KELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQKWRWQ 877
Query: 198 ---DVSRREGALGWAPAAPPPLKDDPE 221
+ RR L PA L+ + +
Sbjct: 878 LEEERKRRRHTLYAKPALQEQLRKEQQ 904
Score = 30.8 bits (68), Expect = 1.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 143 GSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRR 202
G ++ER+ E+ +Q +R + +EE++ A + R+ Q E++ L+ + RR
Sbjct: 1272 GEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRR 1331
Query: 203 E 203
+
Sbjct: 1332 Q 1332
Score = 30.4 bits (67), Expect = 1.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAERE 190
+RE E ++ L EQ ER +R +R +E ER + RRE + +RE
Sbjct: 580 KREEERRQQRLKREQEERLEQRLKR--EEVERLEQEERREQRLKRE 623
Score = 30.4 bits (67), Expect = 1.4
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 147 ERELERRELAVEQGERALE-RRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGA 205
E E + R+ V R E +RRR QEE+R ++ + Q E A + + + RR+
Sbjct: 709 ESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFT 768
Query: 206 LGWAP-----------AAPPPLKDDPE 221
W +A PPL++ E
Sbjct: 769 WQWQAEEKSERGRQRLSARPPLREQRE 795
Score = 30.0 bits (66), Expect = 1.8
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 147 ERELERRELAVEQGERALE-----RRRRALQEEERAAAQARRELQAER---EALQARLR 197
E+E +RE + + E L+ R+R +EEE+ R+EL+ ER E Q RLR
Sbjct: 243 EKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLR 301
Score = 30.0 bits (66), Expect = 1.8
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 134 EQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRE---LQAERE 190
E+ G + RR +E R + Q E +RRR L + Q R+E LQ E E
Sbjct: 852 EEDGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEE 911
Query: 191 ALQARLRDVSRRE 203
LQ R+ RR+
Sbjct: 912 ELQREEREKRRRQ 924
Score = 30.0 bits (66), Expect = 1.8
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 131 RLLEQMGALAVRGSRRERELERRELA-VEQGERALERRRR-ALQEEERAAAQARRELQA- 187
+LL++ +R R+R+ EL EQG + LE +R QE ER + ++L+
Sbjct: 1343 QLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQ 1402
Query: 188 EREALQARLRDVSRRE 203
ERE + RD RE
Sbjct: 1403 EREQQLRQDRDRKFRE 1418
Score = 30.0 bits (66), Expect = 1.8
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 146 RERELERRELAVEQGERALERRRRALQEEE-----------RAAAQARRELQAEREALQA 194
R +E +R+ EQ R ER R+ LQEE+ R Q R+E + E+ Q
Sbjct: 1685 RRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQE 1744
Query: 195 RLRDVSRRE 203
R R + E
Sbjct: 1745 RYRKILEEE 1753
Score = 29.6 bits (65), Expect = 2.3
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 145 RRERELER-RELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
RRE++L R ++L EQ R ++ RR +++ R Q RRE Q RE R ++ R E
Sbjct: 378 RREQQLRREQQLRREQQLRREQQLRR--EQQLRREQQLRREQQLRREQQLRREQEEERHE 435
Score = 29.6 bits (65), Expect = 2.3
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 142 RGSRRERELERR---ELAVEQGERAL-----ERRRRALQEEERAAAQARRELQAEREALQ 193
R RR +ELER+ E V+Q E L E+RRR QE ER + ELQ E E L
Sbjct: 1128 REKRRRQELERQYREEEEVQQEEEQLLREEPEKRRR--QELERQYRE-EEELQQEEEQLL 1184
Query: 194 ARLRDVSRRE 203
++ R+E
Sbjct: 1185 REEQEKRRQE 1194
Score = 29.6 bits (65), Expect = 2.3
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
R +E ER+ L EQ +R+R+ LQEE++ Q R + + + + R + R+E
Sbjct: 1509 RSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQE 1566
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 146 RERELERRELAVEQGERALERRR---RALQEEERAAAQARRELQAEREALQARLRDVSRR 202
R+R+ E +++GE RR+ R +EEE+ + RE + +E Q R +++ R+
Sbjct: 1665 RDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERK 1724
Score = 29.3 bits (64), Expect = 3.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 143 GSRRERELERRELAVEQGERALERRRRALQEE----------ERAAAQARRELQAEREAL 192
G RR ++ + +E + +GE E++ R Q + +R Q R E +AE E L
Sbjct: 134 GQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQL 193
Query: 193 QA 194
Q+
Sbjct: 194 QS 195
Score = 29.3 bits (64), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSR 201
RRE+E ER E EQ ER R +R +E+E +RE + ER + R + + R
Sbjct: 426 RREQEEERHEQKHEQ-ER---REQRLKREQEERRDWLKREEETERHEQERRKQQLKR 478
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Query: 145 RRERELER-------RELAVEQGERALERRRRALQEE--ERAAAQARRELQAEREALQAR 195
RRE++L R ++L EQ R ++ RR +EE E+ Q RRE + +RE Q
Sbjct: 396 RREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKRE--QEE 453
Query: 196 LRDVSRRE 203
RD +RE
Sbjct: 454 RRDWLKRE 461
Score = 28.5 bits (62), Expect = 5.2
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
R+E++L + E Q E ER +R QE+ER + +LQ E E L R+ RR+
Sbjct: 900 RKEQQLLQEEEEELQRE---EREKRRRQEQERQYRE-EEQLQQEEEQLLREEREKRRRQ 954
Score = 28.5 bits (62), Expect = 5.2
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 16/72 (22%)
Query: 146 RERELERRELAVEQGERALERRRRALQEE----ERAAAQARR-----------ELQAERE 190
RE E R+E EQ R ER R+ L+EE ER Q RR +L+ ERE
Sbjct: 1726 REEEQLRQETEQEQLRRQ-ERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQERE 1784
Query: 191 ALQARLRDVSRR 202
Q R ++ R+
Sbjct: 1785 EQQLRSQESDRK 1796
Score = 28.1 bits (61), Expect = 6.8
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 145 RRERELERRELAVEQGERALERRRRAL-----QEEER----AAAQARRELQAEREALQAR 195
RRE+E R +L + E+ LE+ RR QEE R + RR+ + +RE + R
Sbjct: 539 RREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQ-EER 597
Query: 196 LRDVSRRE 203
L +RE
Sbjct: 598 LEQRLKRE 605
Score = 28.1 bits (61), Expect = 6.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
+RE+E R +L + ER +R +R ++EER + +RE E + R + + R E
Sbjct: 568 KREQEERRDQLLKREEERRQQRLKR--EQEERLEQRLKREEVERLEQEERREQRLKREE 624
Score = 28.1 bits (61), Expect = 6.8
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 145 RRERELE-RRELAVEQGERAL-----ERRRRALQEEERAAAQARRELQAEREALQARLRD 198
R+ERE + R++ ++Q E L E+RRR QE E+ + ELQ E E L R+
Sbjct: 953 RQERERQYRKDKKLQQKEEQLLGEEPEKRRR--QEREKKYRE-EEELQQEEEQLLREERE 1009
Query: 199 VSRRE 203
RR+
Sbjct: 1010 KRRRQ 1014
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 110 PPAAPCPPP-PGPAAAPEGDWARLLEQMGALAVRGSRRERELER---------RELAVEQ 159
P AP PP PGPAA+PE R ++ L VR + E +R R++ E+
Sbjct: 1333 PEDAPAQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEE 1392
Query: 160 GERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGALGWA---------P 210
+ ++R + L+E A A+AR L E L + + + WA P
Sbjct: 1393 ARKLQQKRAQMLREAAEAGAEARLALDGE------TLGEEEQEDEQPPWASPSPTSRQSP 1446
Query: 211 AAPPPL 216
A+PPPL
Sbjct: 1447 ASPPPL 1452
Score = 30.8 bits (68), Expect = 1.0
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 32/134 (23%)
Query: 106 AGSSPPA--APCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERA 163
A SP + +P PPP AP VR ++ ER + R L V+ E
Sbjct: 1436 ASPSPTSRQSPASPPPLGGGAP---------------VRTAKAERRHQER-LRVQSPEPP 1479
Query: 164 LERRR------RALQEEERAAAQARRELQAEREALQARLRDVSRREG--------ALGWA 209
R RAL+ E+RA +A R E++AL+A++ +EG L A
Sbjct: 1480 APERALSPAELRALEAEKRALWRAARMKSLEQDALRAQMVLSRSQEGRGTRGPLERLAEA 1539
Query: 210 PAAPPPLKDDPEGD 223
P+ P P D
Sbjct: 1540 PSPAPTPSPTPVED 1553
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 110 PPAAPCPPP-PGPAAAPEGDWARLLEQMGALAVRGSRRERELER---------RELAVEQ 159
P AP PP PGPAA+PE R ++ L VR + E +R R++ E+
Sbjct: 1333 PEDAPAQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEE 1392
Query: 160 GERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGALGWA---------P 210
+ ++R + L+E A A+AR L E L + + + WA P
Sbjct: 1393 ARKLQQKRAQMLREAAEAGAEARLALDGE------TLGEEEQEDEQPPWASPSPTSRQSP 1446
Query: 211 AAPPPL 216
A+PPPL
Sbjct: 1447 ASPPPL 1452
Score = 30.8 bits (68), Expect = 1.0
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 32/134 (23%)
Query: 106 AGSSPPA--APCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERA 163
A SP + +P PPP AP VR ++ ER + R L V+ E
Sbjct: 1436 ASPSPTSRQSPASPPPLGGGAP---------------VRTAKAERRHQER-LRVQSPEPP 1479
Query: 164 LERRR------RALQEEERAAAQARRELQAEREALQARLRDVSRREG--------ALGWA 209
R RAL+ E+RA +A R E++AL+A++ +EG L A
Sbjct: 1480 APERALSPAELRALEAEKRALWRAARMKSLEQDALRAQMVLSRSQEGRGTRGPLERLAEA 1539
Query: 210 PAAPPPLKDDPEGD 223
P+ P P D
Sbjct: 1540 PSPAPTPSPTPVED 1553
>gi|21361517 UBX domain protein 1 [Homo sapiens]
Length = 312
Score = 43.1 bits (100), Expect = 2e-04
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 142 RGSRRERE-LERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVS 200
R R ERE LER QG+ R+R ++E R AA+ RR +AE A + R+R+
Sbjct: 109 REEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKAEELAARQRVREKI 168
Query: 201 RREGAL------GWAPAAPPPLKDDP 220
R+ A G + PPP+ +P
Sbjct: 169 ERDKAERAKKYGGSVGSQPPPVAPEP 194
Score = 30.4 bits (67), Expect = 1.4
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 133 LEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREAL 192
LE G+ A G E ER+E E +++R + EER A + R+ + + + L
Sbjct: 72 LEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQEL 131
Query: 193 QA---RLRDVSRREGA 205
A RL++ R A
Sbjct: 132 SAARQRLQEDEMRRAA 147
>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
Length = 550
Score = 42.7 bits (99), Expect = 3e-04
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 104 SGAGSSPPAAPCPPPPGPAAAPEGDW-------ARLLEQMGALAVRGSRRERELE----- 151
SG S P P PP PA +GDW R LE+ A A + + R
Sbjct: 44 SGTPSPGPPPALPLPPAPALLADGDWESREELRLRELEEARARAAQMEKTMRRWSDCTAN 103
Query: 152 -RRELAVEQGERALERR-----RRALQEEERAAAQARRELQAEREALQARLRDVSRREGA 205
R + + + ER R R+ L + A ARRE Q + +AR R+++R GA
Sbjct: 104 WREKWSKVRAERNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGA 163
Query: 206 LGWAPAAPPPLKDDPEGDRD 225
G A +D PE + +
Sbjct: 164 RGVADQT----RDGPEPEAE 179
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 42.7 bits (99), Expect = 3e-04
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 116 PPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEE 175
PPPP P P+ A EQ A+ + + RERE+ERRE + E ++ R +
Sbjct: 1119 PPPPPPVQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRS 1178
Query: 176 RAAAQARRELQAERE 190
R+ + R+E +E
Sbjct: 1179 RSRDRRRKERAKSKE 1193
Score = 30.4 bits (67), Expect = 1.4
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 158 EQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
E+ ERA ER +R ++EE Q RE +AERE +L RRE
Sbjct: 1240 ERAERAKEREKRRKEQEEE--EQKEREKEAERER-NRQLEREKRRE 1282
Score = 28.9 bits (63), Expect = 4.0
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
RE+E ER + E+ E R +E ER + R + +RE + R R+ RR+
Sbjct: 1263 REKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRD 1320
Score = 28.5 bits (62), Expect = 5.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 130 ARLLEQMGALAVRGSRRE-RELERRELAVEQGERALERRR-RALQEEERAAAQARRELQA 187
++++++ A R RE R E+ E ++ E+ ER R R L+ E+R R+ +
Sbjct: 1232 SQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRER 1291
Query: 188 ERE 190
ERE
Sbjct: 1292 ERE 1294
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 42.7 bits (99), Expect = 3e-04
Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 11/155 (7%)
Query: 50 GYFHLAPGRPGHPSGHW-ATCRLCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGS 108
G L PG P P G A RL + G G G S L + + + + + AG
Sbjct: 96 GPLELLPGGPARPLGPGPAAPRLLKREPDWGDGDAPG-SLLPAQVAACAQTVVSLAAAGQ 154
Query: 109 -SPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERE-LERRELAVEQGERALER 166
+PP +P PP P P AR RGS R+ ER +AV + +R
Sbjct: 155 PTPPTSPEPPRSSPRQTPAPGPAREKSAGKRGPDRGSPEYRQRRERNNIAVRKSRDKAKR 214
Query: 167 RRRALQEEERAAAQARRELQAEREALQARLRDVSR 201
R + +Q Q EL AE E L R+ ++R
Sbjct: 215 RNQEMQ-------QKLVELSAENEKLHQRVEQLTR 242
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 42.7 bits (99), Expect = 3e-04
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 12/187 (6%)
Query: 26 CPGLGPAPT-----PTPPGRLGAPYSEAWGYFHL--APGRPGHPSGHWATCRLCGEQVGR 78
CP GP T P+P G +P +P G + R E+
Sbjct: 481 CPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESA 540
Query: 79 GPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGA 138
P A + A + ++E + + PP P P P A ++ A
Sbjct: 541 APASPAPSPAP-SPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEA 599
Query: 139 LAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRD 198
+ +R + E+RE E+ ER L+ R EE+ A +A E +AEREA R +
Sbjct: 600 TRLLAEKRRQAREQRER--EEQERRLQAERDKRMREEQLAREA--EARAEREAEARRREE 655
Query: 199 VSRREGA 205
RE A
Sbjct: 656 QEAREKA 662
Score = 36.2 bits (82), Expect = 0.025
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 103 SSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGER 162
+S +PP P P G E RLL + A +RERE + R L E+ +R
Sbjct: 575 TSPPAPAPPVTPSKPMAGTTDREEA--TRLLAEKRRQA--REQREREEQERRLQAERDKR 630
Query: 163 A------------LERRRRALQEEERAA---AQARRE----LQAEREALQARLRDVSRRE 203
ER A + EE+ A AQA +E LQ ++E +AR R+ + R+
Sbjct: 631 MREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQ 690
Score = 34.3 bits (77), Expect = 0.095
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 102 ESSGAGSSPPAA---PCPPP-----PGPAAAPEGDWARLLEQMGALAVRGS----RRERE 149
E+ G +PPA PP P P A P D +++ R RRE
Sbjct: 90 EAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREER 149
Query: 150 -----------LERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRD 198
LE+ E A E+ L+ RRR L EE+R A+ RR ER+ Q ++
Sbjct: 150 AKYLAAKKAVWLEKEEKAKALREKQLQERRRRL-EEQRLKAEQRRAALEERQR-QKLEKN 207
Query: 199 VSRREGAL 206
R E A+
Sbjct: 208 KERYEAAI 215
Score = 32.0 bits (71), Expect = 0.47
Identities = 47/182 (25%), Positives = 65/182 (35%), Gaps = 32/182 (17%)
Query: 18 DAAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHL----APGRPGHPSGHWATCRLCG 73
++AA P P+PTP PP + P L AP P PS A
Sbjct: 538 ESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMA------ 591
Query: 74 EQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGDWARLL 133
G + L R R + E A E D
Sbjct: 592 -----GTTDREEATRLLAEKRRQAREQREREEQERRLQA-------------ERDKRMRE 633
Query: 134 EQMGALAVRGSRRERELERRE--LAVEQGERALERRRRALQEEERAAAQARRELQAEREA 191
EQ+ A + RE E RRE A E+ + E + R +++E A A++R E AER+
Sbjct: 634 EQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREE--AERQR 691
Query: 192 LQ 193
L+
Sbjct: 692 LE 693
Score = 30.8 bits (68), Expect = 1.0
Identities = 35/124 (28%), Positives = 46/124 (37%), Gaps = 29/124 (23%)
Query: 111 PAAPCPPP-PGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQG-ERALERRR 168
PA+PCP P PG P+ R G A R R+ E +E G E + +R
Sbjct: 477 PASPCPSPGPGHTLPPKPPSPR-----GTTASPKGRVRRKEEAKESPSAAGPEDKSQSKR 531
Query: 169 RALQEEERAAAQARRELQAEREALQARLRDVSRREGALGWAPAAPPPLKDDP--EGDRDG 226
RA E+E AA + A +P PP K+ P E D
Sbjct: 532 RASNEKESAAPASPAPSPAP--------------------SPTPAPPQKEQPPAETPTDA 571
Query: 227 CVIT 230
V+T
Sbjct: 572 AVLT 575
Score = 28.9 bits (63), Expect = 4.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 93 LRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGD 128
+ S R EL GAG+ PPA PP P +PEGD
Sbjct: 1 MESGPRAEL---GAGA-PPAVVARTPPEPRPSPEGD 32
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 42.4 bits (98), Expect = 3e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 140 AVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLR 197
A R RE E RE E+ +RA E R+R +EE+RAA + +R + E+ A + R R
Sbjct: 301 AAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQR 358
Score = 37.7 bits (86), Expect = 0.009
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
+R E R+ E+ +RA E R+R +EE+RAA + +R + E+ A + R R + E
Sbjct: 322 KRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEE 378
Score = 35.0 bits (79), Expect = 0.055
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 141 VRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLR 197
+ R E E + A E+ R E R R +EE+RAA + +R + E+ A + R R
Sbjct: 288 IADERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQR 344
Score = 33.9 bits (76), Expect = 0.12
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRRE 203
+R E R+ E+ +RA E R+R +EE+RAA + +R E E +A++ + R +
Sbjct: 336 KRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEE--KAKVEEQKRNK 390
Score = 32.3 bits (72), Expect = 0.36
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRD 198
R+R E + A E+ +R E +RA +E +RA A+ + + E + +L +
Sbjct: 342 RQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQLEE 394
Score = 32.0 bits (71), Expect = 0.47
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 144 SRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRR 202
+R E E ER + EQ ++ + R R ++ EE+AAAQ R +AE + R+R+ +R
Sbjct: 270 ARLEAE-ERERIKAEQDKKIADERAR-IEAEEKAAAQERERREAEE---RERMREEEKR 323
Score = 31.6 bits (70), Expect = 0.61
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 124 APEGDWARLLEQMGALAVRGSRRERELERRE-------LAVEQGERALERRRRALQEEER 176
AP+ + + LE++ RG E E+ + L +E+ ++ E RR+ L+EEE+
Sbjct: 527 APQVEAGKRLEELRRR--RGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQ 584
Query: 177 AAAQARRELQAEREALQARLRDVSRREGA 205
Q + + E + RL++ R A
Sbjct: 585 RRKQEEADRKLREEEEKRRLKEEIERRRA 613
Score = 30.0 bits (66), Expect = 1.8
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 120 GPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAA 179
G + E + + +Q AL + +++RE R+ L E+ R E R L+EEE
Sbjct: 544 GETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEE--- 600
Query: 180 QARRELQAEREALQA 194
+R L+ E E +A
Sbjct: 601 --KRRLKEEIERRRA 613
>gi|239742598 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 41.2 bits (95), Expect = 8e-04
Identities = 43/126 (34%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 96 AHRRELESSGAGSSPPAAPC--PPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERR 153
A RR+L++S GS PA C P P GP P R L + G+R R
Sbjct: 154 ADRRQLDAS-PGSRRPALVCARPSPQGP---PTAGGPRRRSVSAGLVLAGARGPARPSRP 209
Query: 154 ELAVEQGERALERRRRALQEEERAAAQAR-RELQAEREALQARLRDVSRR-----EGALG 207
AV GER RRA RA + R R + R L LR V R +G G
Sbjct: 210 HPAVRAGERERTHLRRAPGAAGRARERRRSRANEWSRRLLAGDLRPVPGRTARGCQGECG 269
Query: 208 WAPAAP 213
P AP
Sbjct: 270 CLPLAP 275
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 41.2 bits (95), Expect = 8e-04
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 99 RELESSGAGSSPPAAPCPPP-PGPA----AAPEGDWARLLEQMGALAVRGSRR---EREL 150
R+ +S A S+PP P P P PGPA A+P E + L +R + +R L
Sbjct: 221 RKSVASSACSTPPPGPGPGPCPGPASASPASPSPADVAYEEGLARLKIRALEKLEVDRRL 280
Query: 151 ERRELAVEQ------GERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRR 202
ER VEQ G E R+A + E A Q L E+E L+ R ++SR+
Sbjct: 281 ERLSEEVEQKIAGQVGRLQAELERKAAELE--TARQESARLGREKEELEERASELSRQ 336
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 40.8 bits (94), Expect = 0.001
Identities = 26/65 (40%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 5 EPACTMDQARGLDDAA--ARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHP 62
EP ARG A A G C +G AP PT PGR G +WG A G G P
Sbjct: 40 EPCMAPGAARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGL---RSWGAAGSARGSEGRP 96
Query: 63 SGHWA 67
S A
Sbjct: 97 SSRQA 101
Score = 28.1 bits (61), Expect = 6.8
Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 7/126 (5%)
Query: 94 RSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELER- 152
R + L + GAG S PPP P A W G+ SR+ R L R
Sbjct: 49 RGRGKPALGAHGAGCSSMGG-APPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRP 107
Query: 153 RELAVEQGERALERRR---RALQEEERAAAQARRELQAEREALQARLRDVSRREGALGWA 209
A + R RR A + RA + RR L+ L +L +R L +
Sbjct: 108 SRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRG--RVLLRQLDPFTRPRFPLQFF 165
Query: 210 PAAPPP 215
P P
Sbjct: 166 QGCPQP 171
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 88 ALWRHLRSAHRRE--LESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMG-ALAVRGS 144
AL R L +RR+ LE G G PP AP + R LE G A R
Sbjct: 255 ALERRLWEENRRQELLEEEGEGQEPPLEA-------ERAPREEQQRSLEAPGWEDAERRE 307
Query: 145 RREREL-----ERRELAVE---------QGERALERRRRALQEEERAAAQARRELQAERE 190
R ERE ERR L + + + LE RRR +EE R A + +R+ + E E
Sbjct: 308 REERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEEEGRCAEELKRQEEEEAE 367
Query: 191 ALQARLRDVSRREGALGWAPAAPPPLKDDPEGDR 224
+ ++ ++E + P A L++ EG R
Sbjct: 368 GWE----ELEQQEAEVQGPPEA---LEETGEGRR 394
>gi|239754052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 96 AHRRELESSGAGSSPPAAPC--PPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERR 153
A RR+L++S GS PA C P P GP P R L + G+R R
Sbjct: 154 ADRRQLDAS-PGSRRPALVCARPSPQGP---PTAGGPRRRSVSAGLVLAGARGPARPSRP 209
Query: 154 ELAVEQGERALERRRRALQEEERAAAQAR-RELQAEREALQARLRDVSRR-----EGALG 207
AV GER RRA RA + R R + R L LR R +G G
Sbjct: 210 HPAVRAGERERTHLRRAPGAAGRARERRRSRANEWSRRLLSGELRPEPDRTARGCQGECG 269
Query: 208 WAPAAP 213
P AP
Sbjct: 270 CLPLAP 275
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 40.0 bits (92), Expect = 0.002
Identities = 41/141 (29%), Positives = 52/141 (36%), Gaps = 34/141 (24%)
Query: 11 DQARGLDDAAARGGQCPGLGPAPTPTPPGRLGAPY-------SEAWGYFHLAPGRPGHPS 63
++ RGL++ A+ GQCP L GRLG + A G L G H +
Sbjct: 705 ERFRGLEEGQAQAGQCPSL--------EGRLGRLEGVCERLDTVAGGLQGLREGLSRHVA 756
Query: 64 GHWATCR---------------LCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGS 108
G WA R L G Q G G A S+L H+ L+ +
Sbjct: 757 GLWAGLRETNTTSQMQAALLEKLVGGQAGLGRRLGALNSSLQLLEDRLHQLSLKDLTGPA 816
Query: 109 SPPAAPCPP----PPGPAAAP 125
P PP PPGPA P
Sbjct: 817 GEAGPPGPPGLQGPPGPAGPP 837
Score = 33.1 bits (74), Expect = 0.21
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 80 PGFHAGTSALWRHLR------SAHRRELE--------SSGAGSSPPAAPCPPPPGPAAAP 125
PG H + + L+ S H +EL SS +G S AP PPGP+
Sbjct: 231 PGVHETLNEIQHQLQLLDTRVSTHDQELGHLNNHHGGSSSSGGSRAPAPASAPPGPSEEL 290
Query: 126 EGDWARLLEQMGALAVR---GSRRERELERRELAVEQGERALERRRRALQEEER----AA 178
+ L++ ++ + G RR+++ +R L RA+E+ +++E +R A
Sbjct: 291 LRQLEQRLQESCSVCLAGLDGFRRQQQEDRERL------RAMEKLLASVEERQRHLAGLA 344
Query: 179 AQARRELQAEREALQARLRDVSRR 202
R + L RL ++ RR
Sbjct: 345 VGRRPPQECCSPELGRRLAELERR 368
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 145 RRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREG 204
+RERE + RE EQ E+ ER RRA EE R +ARRE+ A ++ D S +
Sbjct: 172 KRERERKMREQQKEQREQK-ERERRA--EERRKEREARREVSAHHRTMR---EDYSDKVK 225
Query: 205 ALGWAPAAPPPLKD 218
A W+ + P P ++
Sbjct: 226 ASHWSRSPPRPPRE 239
>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
Length = 1171
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 46 SEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGP-GFHAGTSALWRHLRSAHRR-ELES 103
S W +F+L+P A C C + RG G GTS L RH+ AHR L+
Sbjct: 288 SAVWKHFYLSP-----LDNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQE 342
Query: 104 SGAGSSPPAAPCPPPPGPA-AAPEGD 128
+G PP PP P+ PEG+
Sbjct: 343 NGGTGIPPLYSTPPTLLPSLLPPEGE 368
Score = 38.5 bits (88), Expect = 0.005
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 46 SEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFHAGTSALWRHLRSAH 97
SE W +F LAP A CR CG + RG GTS L RHL H
Sbjct: 459 SEVWHHFSLAP-----MDSLKAECRYCGCAISRGKKGDVGTSCLMRHLYRRH 505
Score = 37.0 bits (84), Expect = 0.015
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 46 SEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFH-AGTSALWRHLRSAHRREL-ES 103
S AW +F ++P A C C ++ RG TS L RH+R AH L +
Sbjct: 118 SPAWKHFFISPR-----DSTKAICMYCVKEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQE 172
Query: 104 SGAGSSPPAAPCPP---PPGPAAAPEGDWARLL 133
+G+ S+ + P P PP PA A GD + +L
Sbjct: 173 NGSVSAVSSFPSPSLLLPPQPADA--GDLSTIL 203
Score = 32.3 bits (72), Expect = 0.36
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 46 SEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPG-FHAGTSALWRHLRSAHRRELESS 104
S+ W +F + C CG + RG + GTS L RHL+ H L++
Sbjct: 561 SKLWNHFSICSA-----DSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLKTE 615
Query: 105 GAGSSPPAAP 114
+ ++ P++P
Sbjct: 616 VSETARPSSP 625
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 95 SAHRRELESSGAGSSPPAAPCPPPPGPAAAPEG-----DWARLLEQMGALA--VRGSRRE 147
++ + + S G +P PPPP P+ + RL ++ G L +RG +
Sbjct: 287 ASSQNSMSSHGKQGAPKKRKAPPPPASIPMPDDRDAYEEIVRLRQERGRLLQKIRGLEQH 346
Query: 148 RELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARL 196
+E ++E LER+ + LQ+ + + L E E+LQ+RL
Sbjct: 347 KERRQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRL 395
Score = 30.0 bits (66), Expect = 1.8
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 24 GQCPGLGPAPTPTPPGRLGAPYSEAWG 50
G CP GP P P P R G S+ WG
Sbjct: 21 GSCPPCGPCPIPKPAAR-GRRQSQDWG 46
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/121 (28%), Positives = 43/121 (35%), Gaps = 30/121 (24%)
Query: 16 LDDAAARGGQCPGLG-----PAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCR 70
LD + G PG G P P P PP P S +W ++P RP
Sbjct: 699 LDGWVSPGPWEPGRGSSMSSPPPLPPPP-----PMSPSWSERSVSPLRP----------- 742
Query: 71 LCGEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGS------SPPAAPCPPPPGPAAA 124
E R P + +A R+ AG+ SPP AP PPPP P
Sbjct: 743 ---ETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPP 799
Query: 125 P 125
P
Sbjct: 800 P 800
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 39.3 bits (90), Expect = 0.003
Identities = 55/204 (26%), Positives = 76/204 (37%), Gaps = 32/204 (15%)
Query: 19 AAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGR 78
AA+ G + P GPA P G P G P G PS CR +
Sbjct: 78 AASGGSRAPRHGPARDP------GLPSRRLPGSCPATPQSSGDPSSRRPLCRPAPRE--- 128
Query: 79 GPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGA 138
G R L AH R E+ A +S P+ P P PA +G+ L A
Sbjct: 129 -----EGARGSQRVLPQAHCRPREALPAAASRPSPSSPLP--PARGRDGEERGL---SPA 178
Query: 139 LAVRGSRRER-ELERRELAVEQGERALERRR----------RALQEEE-RAAAQARRELQ 186
L +RGS R R + A + + L R R R+L+ EE +A RE
Sbjct: 179 LGLRGSLRARGRGDSVPAAASEADPFLHRLRPMLSSAFGQDRSLRPEEIEELREAFREFD 238
Query: 187 AEREALQARLRDVSRREGALGWAP 210
+++ RD+ +G+ P
Sbjct: 239 KDKDG-YINCRDLGNCMRTMGYMP 261
Score = 31.6 bits (70), Expect = 0.61
Identities = 28/76 (36%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 89 LWRHLRSAHRRELESSGAGSSPPAAPCPPPP-----GPAA-----APEGDWARLLEQMGA 138
L R L RRE S AG P PPPP GPAA A LL+ A
Sbjct: 18 LQRVLGLGSRREPRSLPAGGPAPRRTAPPPPGHASAGPAAMSSHIAKSESKTSLLKAAAA 77
Query: 139 LAVRGSRRERELERRE 154
A GSR R R+
Sbjct: 78 AASGGSRAPRHGPARD 93
>gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo
sapiens]
Length = 297
Score = 38.9 bits (89), Expect = 0.004
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 122 AAAPEGDWARLLE-QMGALAVRGSRRERELERRELAVEQGERALERR-----RRALQEEE 175
A+ P+ + R L+ + G+L V ++E + L VE+G +E++ R+LQ EE
Sbjct: 65 ASKPQMEEERSLQVEEGSLQVEEG--SLQVEEKSLQVEEGSLQVEKKSLQVEERSLQVEE 122
Query: 176 RAAAQARRELQAEREALQARLRDVSRREGAL 206
R+ + LQ E +LQ R + EG+L
Sbjct: 123 RSLQVEEKSLQVEERSLQVEERSLQVEEGSL 153
Score = 37.4 bits (85), Expect = 0.011
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
ER L+ E +++ E++L+ R+LQ EER+ LQ E +LQ D+ EG L
Sbjct: 115 ERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGL 174
Score = 37.0 bits (84), Expect = 0.015
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 149 ELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
++E++ L VE ER+L+ R+LQ EE++ R LQ E +LQ + EG+L
Sbjct: 105 QVEKKSLQVE--ERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSL 160
Score = 36.6 bits (83), Expect = 0.019
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 137 GALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARL 196
G+L V ++ ++E R L VE ER+L+ ++LQ EER+ R LQ E +LQ
Sbjct: 102 GSLQVE--KKSLQVEERSLQVE--ERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEE 157
Query: 197 RDVSRREGAL 206
+ EG L
Sbjct: 158 GSLQVEEGDL 167
Score = 30.4 bits (67), Expect = 1.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
E+ L+ E +++ ER+L+ +LQ EE + +LQ E LQ + EG+L
Sbjct: 129 EKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSLQVEEGSL 188
>gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo
sapiens]
Length = 487
Score = 38.9 bits (89), Expect = 0.004
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 122 AAAPEGDWARLLE-QMGALAVRGSRRERELERRELAVEQGERALERR-----RRALQEEE 175
A+ P+ + R L+ + G+L V ++E + L VE+G +E++ R+LQ EE
Sbjct: 255 ASKPQMEEERSLQVEEGSLQVEEG--SLQVEEKSLQVEEGSLQVEKKSLQVEERSLQVEE 312
Query: 176 RAAAQARRELQAEREALQARLRDVSRREGAL 206
R+ + LQ E +LQ R + EG+L
Sbjct: 313 RSLQVEEKSLQVEERSLQVEERSLQVEEGSL 343
Score = 37.4 bits (85), Expect = 0.011
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
ER L+ E +++ E++L+ R+LQ EER+ LQ E +LQ D+ EG L
Sbjct: 305 ERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGL 364
Score = 37.0 bits (84), Expect = 0.015
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 149 ELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
++E++ L VE ER+L+ R+LQ EE++ R LQ E +LQ + EG+L
Sbjct: 295 QVEKKSLQVE--ERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSL 350
Score = 36.6 bits (83), Expect = 0.019
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 137 GALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARL 196
G+L V ++ ++E R L VE ER+L+ ++LQ EER+ R LQ E +LQ
Sbjct: 292 GSLQVE--KKSLQVEERSLQVE--ERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEE 347
Query: 197 RDVSRREGAL 206
+ EG L
Sbjct: 348 GSLQVEEGDL 357
Score = 30.4 bits (67), Expect = 1.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 147 ERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQARLRDVSRREGAL 206
E+ L+ E +++ ER+L+ +LQ EE + +LQ E LQ + EG+L
Sbjct: 319 EKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSLQVEEGSL 378
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,353,129
Number of Sequences: 37866
Number of extensions: 895453
Number of successful extensions: 17034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 868
Number of HSP's that attempted gapping in prelim test: 10972
Number of HSP's gapped (non-prelim): 5815
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.