Guide to the Human Genome
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Name: KIAA1211 Sequence: fasta or formatted (1233aa) NCBI GI: 148806928
Description:

hypothetical protein LOC57482

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6        118           3
 C cysteine            0.8         10           1
 D aspartate           4.0         49           1
 E glutamate          14.3        176           5
 F phenylalanine       1.5         18           1
 G glycine             6.1         75           2
 H histidine           1.6         20           1
 I isoleucine          1.9         24           2
 K lysine              7.2         89           4
 L leucine             7.4         91           2
 M methionine          1.1         13           1
 N asparagine          2.1         26           1
 P proline            10.0        123           3
 Q glutamine           6.5         80           3
 R arginine            8.5        105           3
 S serine              8.6        106           3
 T threonine           4.1         51           2
 V valine              3.4         42           2
 W tryptophan          1.0         12           1
 Y tyrosine            0.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57482 
LOC283685             0.039   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.039   PREDICTED: golgi autoantigen, golgin subfamily a-li...
RPGR                  0.038   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC727832             0.037   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.037   golgi autoantigen, golgin subfamily a-like 
TCHH                  0.036   trichohyalin 
LOC100133758          0.035   PREDICTED: hypothetical protein, partial 
NEFH                  0.034   neurofilament, heavy polypeptide 200kDa 
LOC440243             0.034   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC100286959          0.034   PREDICTED: hypothetical protein XP_002343921 
LOC645202             0.034   PREDICTED: hypothetical protein LOC645202 
C2orf55               0.030   hypothetical protein LOC343990 
RBM25                 0.028   RNA binding motif protein 25 
CALD1                 0.028   caldesmon 1 isoform 1 
BAT2D1                0.027   HBxAg transactivated protein 2 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
LOC400352             0.026   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.026   PREDICTED: similar to Putative golgin subfamily A m...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RP1L1                 0.025   retinitis pigmentosa 1-like 1 
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
LOC100133220          0.025   PREDICTED: hypothetical protein 
CDC2L2                0.025   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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