ZBED4 5381

Name: ZBED4	Sequence: fasta or formatted (1171aa)		NCBI GI: 153791893
Description: zinc finger, BED-type containing 4		Referenced in: Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 74 2 C cysteine 2.6 30 1 D aspartate 4.9 57 3 E glutamate 7.6 89 3 F phenylalanine 3.2 37 2 G glycine 4.7 55 2 H histidine 3.0 35 2 I isoleucine 3.8 45 2 K lysine 6.5 76 3 L leucine 9.9 116 3 M methionine 2.9 34 2 N asparagine 3.2 38 2 P proline 6.0 70 2 Q glutamine 3.3 39 2 R arginine 5.0 59 3 S serine 12.9 151 4 T threonine 4.7 55 1 V valine 5.9 69 2 W tryptophan 1.3 15 2 Y tyrosine 2.3 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, BED-type containing 4 ZBED1 0.051 zinc finger, BED-type containing 1 ZNF618 0.009 zinc finger protein 618 ZBED2 0.008 zinc finger, BED domain containing 2 ZBED3 0.006 zinc finger, BED-type containing 3 C7orf29 0.006 hypothetical protein LOC113763 SAMSN1 0.005 SAM domain, SH3 domain and nuclear localization sign... MXRA5 0.005 adlican PLEKHG3 0.005 pleckstrin homology domain containing, family G, mem... CT47B1 0.004 cancer/testis antigen family 147, member B1 RBP3 0.004 retinol-binding protein 3 precursor PRDM2 0.004 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.004 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.004 retinoblastoma protein-binding zinc finger protein i... PES1 0.004 pescadillo homolog 1, containing BRCT domain GORASP2 0.004 golgi reassembly stacking protein 2 MYO18B 0.004 myosin XVIIIB KIF4B 0.004 kinesin family member 4B MUC13 0.004 mucin 13, epithelial transmembrane NIN 0.004 ninein isoform 4 NIN 0.004 ninein isoform 5 NIN 0.004 ninein isoform 1 NIN 0.004 ninein isoform 2 WDR87 0.003 NYD-SP11 protein RBBP6 0.003 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.003 retinoblastoma-binding protein 6 isoform 1 PPP1R9B 0.003 protein phosphatase 1, regulatory subunit 9B BCAS3 0.003 breast carcinoma amplified sequence 3 isoform 1 [Ho... BCAS3 0.003 breast carcinoma amplified sequence 3 isoform 2 [Ho... TRERF1 0.003 transcriptional regulating factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.