Guide to the Human Genome
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Name: ANKRD24 Sequence: fasta or formatted (1146aa) NCBI GI: 126723390
Description:

ankyrin repeat domain 24

Referenced in:

Ankyrin Family
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.0        172           3
 C cysteine            1.5         17           1
 D aspartate           3.7         42           2
 E glutamate          13.5        155           3
 F phenylalanine       0.7          8           1
 G glycine             7.0         80           5
 H histidine           2.0         23           2
 I isoleucine          1.9         22           2
 K lysine              3.7         42           2
 L leucine            11.0        126           3
 M methionine          1.9         22           1
 N asparagine          1.7         19           2
 P proline             3.9         45           4
 Q glutamine           7.4         85           3
 R arginine            8.2         94           2
 S serine              5.7         65           2
 T threonine           5.3         61           2
 V valine              5.0         57           2
 W tryptophan          0.2          2           1
 Y tyrosine            0.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 24 
RAI14                 0.121   retinoic acid induced 14 isoform d 
RAI14                 0.120   retinoic acid induced 14 isoform c 
RAI14                 0.120   retinoic acid induced 14 isoform a 
RAI14                 0.120   retinoic acid induced 14 isoform a 
RAI14                 0.120   retinoic acid induced 14 isoform a 
RAI14                 0.110   retinoic acid induced 14 isoform b 
UACA                  0.109   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.107   uveal autoantigen with coiled-coil domains and ankyr...
ANKRD35               0.096   ankyrin repeat domain 35 
PLEC1                 0.047   plectin 1 isoform 11 
PLEC1                 0.047   plectin 1 isoform 10 
PLEC1                 0.047   plectin 1 isoform 8 
PLEC1                 0.047   plectin 1 isoform 7 
PLEC1                 0.047   plectin 1 isoform 6 
PLEC1                 0.047   plectin 1 isoform 3 
PLEC1                 0.047   plectin 1 isoform 2 
PLEC1                 0.047   plectin 1 isoform 1 
CROCC                 0.043   ciliary rootlet coiled-coil 
ANKRD28               0.040   ankyrin repeat domain 28 
CEP250                0.040   centrosomal protein 2 
MYH14                 0.039   myosin, heavy chain 14 isoform 1 
MYH14                 0.039   myosin, heavy chain 14 isoform 2 
MYH14                 0.039   myosin, heavy chain 14 isoform 3 
CCDC88B               0.039   coiled-coil domain containing 88 
MYH7B                 0.039   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
ANKRD44               0.036   ankyrin repeat domain 44 
PPL                   0.036   periplakin 
MYH9                  0.036   myosin, heavy polypeptide 9, non-muscle 
NUMA1                 0.035   nuclear mitotic apparatus protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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