| Name: LOC100289273 | Sequence: fasta or formatted (487aa) | NCBI GI: 239743019 | |
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Description: PREDICTED: hypothetical protein XP_002342720
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.9 24 2 C cysteine 1.6 8 1 D aspartate 3.9 19 1 E glutamate 14.8 72 3 F phenylalanine 1.4 7 1 G glycine 10.1 49 4 H histidine 1.8 9 1 I isoleucine 1.6 8 1 K lysine 4.1 20 2 L leucine 9.9 48 2 M methionine 1.6 8 1 N asparagine 0.8 4 1 P proline 5.3 26 2 Q glutamine 8.4 41 2 R arginine 7.0 34 2 S serine 8.6 42 2 T threonine 4.5 22 2 V valine 7.6 37 1 W tryptophan 1.4 7 1 Y tyrosine 0.4 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342720 LOC100289979 0.581 PREDICTED: hypothetical protein XP_002346878 LOC100133758 0.090 PREDICTED: hypothetical protein, partial ZAN 0.057 zonadhesin isoform 3 ZAN 0.057 zonadhesin isoform 6 KIAA1826 0.048 hypothetical protein LOC84437 LOC645202 0.044 PREDICTED: hypothetical protein LOC645202 CCDC88A 0.041 coiled-coil domain containing 88A isoform 2 CCDC88A 0.041 coiled-coil domain containing 88A isoform 1 RPGR 0.039 retinitis pigmentosa GTPase regulator isoform C [Hom... LOC283685 0.038 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.038 PREDICTED: golgi autoantigen, golgin subfamily a-li... WDR87 0.038 NYD-SP11 protein LOC400352 0.036 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.036 PREDICTED: similar to Putative golgin subfamily A m... CCDC70 0.035 coiled-coil domain containing 70 precursor RP1L1 0.035 retinitis pigmentosa 1-like 1 GPR101 0.034 G protein-coupled receptor 101 CCDC88B 0.034 coiled-coil domain containing 88 LOC727832 0.033 golgi autoantigen, golgin subfamily a-like TCHH 0.033 trichohyalin LOC440243 0.032 PREDICTED: Putative golgin subfamily A member 6-lik... LOC100133220 0.032 PREDICTED: hypothetical protein LOC283767 0.029 golgi autoantigen, golgin subfamily a-like FBF1 0.027 Fas (TNFRSF6) binding factor 1 MYH6 0.026 myosin heavy chain 6 CROCC 0.026 ciliary rootlet coiled-coil LOC651807 0.026 PREDICTED: hypothetical protein PELP1 0.026 proline, glutamic acid and leucine rich protein 1 [... NEFM 0.025 neurofilament, medium polypeptide 150kDa isoform 1 ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
