UBXN1 12983

Name: UBXN1	Sequence: fasta or formatted (312aa)		NCBI GI: 21361517
Description: UBX domain protein 1		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 31 2 C cysteine 0.6 2 1 D aspartate 3.5 11 2 E glutamate 16.0 50 3 F phenylalanine 1.3 4 1 G glycine 9.3 29 3 H histidine 1.0 3 1 I isoleucine 1.6 5 1 K lysine 3.5 11 2 L leucine 9.6 30 2 M methionine 2.9 9 1 N asparagine 0.6 2 1 P proline 6.4 20 3 Q glutamine 7.1 22 1 R arginine 13.1 41 3 S serine 5.1 16 2 T threonine 3.5 11 1 V valine 3.2 10 1 W tryptophan 0.6 2 1 Y tyrosine 1.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 UBX domain protein 1 UBXN4 0.125 UBX domain containing 2 UBAC1 0.073 ubiquitin associated domain containing 1 UBASH3B 0.068 ubiquitin associated and SH3 domain containing, B [H... MAP7 0.066 microtubule-associated protein 7 KIAA1211 0.063 hypothetical protein LOC57482 LOC100133599 0.061 PREDICTED: hypothetical protein USP5 0.059 ubiquitin specific peptidase 5 isoform 2 USP5 0.059 ubiquitin specific peptidase 5 isoform 1 MAP4K4 0.058 mitogen-activated protein kinase kinase kinase kinas... MAP4K4 0.058 mitogen-activated protein kinase kinase kinase kinas... INCENP 0.058 inner centromere protein antigens 135/155kDa isofor... INCENP 0.058 inner centromere protein antigens 135/155kDa isofor... ENAH 0.056 enabled homolog isoform a ENAH 0.056 enabled homolog isoform b GIGYF2 0.054 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.054 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.054 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.054 GRB10 interacting GYF protein 2 isoform b MAP4K4 0.054 mitogen-activated protein kinase kinase kinase kinas... MAP7D2 0.054 MAP7 domain containing 2 TCHH 0.052 trichohyalin CALD1 0.052 caldesmon 1 isoform 1 PELP1 0.051 proline, glutamic acid and leucine rich protein 1 [... CALD1 0.051 caldesmon 1 isoform 5 CALD1 0.051 caldesmon 1 isoform 4 CALD1 0.051 caldesmon 1 isoform 3 CALD1 0.051 caldesmon 1 isoform 2 MAP7D1 0.051 MAP7 domain containing 1 LOC100286959 0.049 PREDICTED: hypothetical protein XP_002343921 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.