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Search of human proteins with 14150100
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens] 380 e-106
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens] 34 0.087
gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens] 33 0.11
gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 33 0.15
gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 33 0.15
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [... 33 0.15
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho... 33 0.15
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H... 33 0.15
gi|46094058 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Ho... 32 0.25
gi|4557733 latent transforming growth factor beta binding protei... 32 0.33
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 29 2.1
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens] 29 2.8
gi|26892295 methylmalonic aciduria type A precursor [Homo sapiens] 28 3.6
gi|7706212 TAF9 RNA polymerase II, TATA box binding protein-asso... 28 3.6
gi|75677353 AAA-ATPase TOB3 [Homo sapiens] 28 3.6
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho... 28 3.6
gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens] 28 3.6
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 28 4.8
gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo... 28 4.8
gi|239750047 PREDICTED: similar to neuron navigator 2, partial [... 28 4.8
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] 28 4.8
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 28 4.8
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 28 4.8
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 28 4.8
gi|112382257 InaD-like [Homo sapiens] 28 6.2
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ... 28 6.2
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ... 28 6.2
gi|33519450 NLR family, pyrin domain containing 9 [Homo sapiens] 28 6.2
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens] 28 6.2
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens] 28 6.2
>gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]
Length = 190
Score = 380 bits (976), Expect = e-106
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRG 60
MARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRG
Sbjct: 1 MARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRG 60
Query: 61 PLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMEL 120
PLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMEL
Sbjct: 61 PLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMEL 120
Query: 121 FSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPD 180
FSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPD
Sbjct: 121 FSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPD 180
Query: 181 IVTCVQSSRK 190
IVTCVQSSRK
Sbjct: 181 IVTCVQSSRK 190
>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
Length = 753
Score = 33.9 bits (76), Expect = 0.087
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 3 RHVFLTGPPGVGKTTLI-----HKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSG 57
R V L GPPGVGKT L+ +E+L S + G E + RR+ F
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRV-FQRARELA 293
Query: 58 TRGP 61
+RGP
Sbjct: 294 SRGP 297
Score = 27.7 bits (60), Expect = 6.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDG 35
V L GPPG KTTL+ + S V V G
Sbjct: 501 VLLYGPPGCAKTTLVRALATSCHCSFVSVSG 531
>gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens]
Length = 201
Score = 33.5 bits (75), Expect = 0.11
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 2 ARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVR---QGGRRIGFDVVTLSG 57
A HV + G GKT+L+++ VP GF TE++R G R I F V + G
Sbjct: 21 ALHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGG 79
>gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform b [Homo sapiens]
Length = 619
Score = 33.1 bits (74), Expect = 0.15
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQG-GRRIGF 50
V+LTG G GKTT+ E L S +P + VR G R +GF
Sbjct: 45 VWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGF 91
>gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform a [Homo sapiens]
Length = 614
Score = 33.1 bits (74), Expect = 0.15
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQG-GRRIGF 50
V+LTG G GKTT+ E L S +P + VR G R +GF
Sbjct: 45 VWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGF 91
>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
[Homo sapiens]
Length = 471
Score = 33.1 bits (74), Expect = 0.15
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 4 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 63
HV +TGPP GK++L++ S S P G + + GF V+ LS T G
Sbjct: 251 HVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTAGLRE 309
Query: 64 RVGLEPPPGKRECR 77
VG G R R
Sbjct: 310 GVGPVEQEGVRRAR 323
>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
sapiens]
Length = 492
Score = 33.1 bits (74), Expect = 0.15
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 4 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 63
HV +TGPP GK++L++ S S P G + + GF V+ LS T G
Sbjct: 251 HVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTAGLRE 309
Query: 64 RVGLEPPPGKRECR 77
VG G R R
Sbjct: 310 GVGPVEQEGVRRAR 323
>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
sapiens]
Length = 524
Score = 33.1 bits (74), Expect = 0.15
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 4 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 63
HV +TGPP GK++L++ S S P G + + GF V+ LS T G
Sbjct: 283 HVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTAGLRE 341
Query: 64 RVGLEPPPGKRECR 77
VG G R R
Sbjct: 342 GVGPVEQEGVRRAR 355
>gi|46094058 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo
sapiens]
Length = 624
Score = 32.3 bits (72), Expect = 0.25
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQG-GRRIGF 50
V+LTG G GKTT+ E L G+P + +RQG + +GF
Sbjct: 55 VWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGF 101
>gi|4557733 latent transforming growth factor beta binding protein 2
[Homo sapiens]
Length = 1821
Score = 32.0 bits (71), Expect = 0.33
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Query: 48 IGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQ 107
+G V G+ L G +P P EC VD+ E PV C + PG
Sbjct: 1229 VGGHCVNTEGSFNCLCETGFQPSPESGEC------VDIDECEDYGDPVCGTWKCENSPGS 1282
Query: 108 RVCVI 112
CV+
Sbjct: 1283 YRCVL 1287
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 29.3 bits (64), Expect = 2.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVT 54
V +TGP GVGKT ++ ++ L GF EV +R G +++
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL--------GFKIFEVNASSQRSGRQILS 1169
>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
Length = 4624
Score = 28.9 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 3 RHVFLT-GPPGVGKTTLIHKASEVLKSSGVP 32
RH +T GP G GKTT IH + G P
Sbjct: 2255 RHGMMTLGPSGAGKTTCIHTLMRAMTDCGKP 2285
>gi|26892295 methylmalonic aciduria type A precursor [Homo sapiens]
Length = 418
Score = 28.5 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 1 MARHVFLTGPPGVGKTTLIHKASEVLKSSG 30
+A V L+GPPG GK+T I ++L G
Sbjct: 142 LAFRVGLSGPPGAGKSTFIEYFGKMLTERG 171
>gi|7706212 TAF9 RNA polymerase II, TATA box binding
protein-associated factor isoform b [Homo sapiens]
Length = 172
Score = 28.5 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 4 HVFLTGPPGVGKTTLIHKASEVLKSSGV 31
++ LTG PGVGKTTL E+ SG+
Sbjct: 5 NILLTGTPGVGKTTL---GKELASKSGL 29
>gi|75677353 AAA-ATPase TOB3 [Homo sapiens]
Length = 648
Score = 28.5 bits (62), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 3 RHVFLTGPPGVGKTTLIHK 21
RH+ L GPPG GKT K
Sbjct: 346 RHILLYGPPGTGKTLFAKK 364
>gi|27501458 CTF18, chromosome transmission fidelity factor 18
homolog [Homo sapiens]
Length = 975
Score = 28.5 bits (62), Expect = 3.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 7 LTGPPGVGKTTLIH 20
L GPPG+GKTTL H
Sbjct: 372 LCGPPGLGKTTLAH 385
>gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens]
Length = 411
Score = 28.5 bits (62), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 3 RHVFLTGPPGVGKTTLIHK 21
RH+ L GPPG GKT K
Sbjct: 171 RHILLYGPPGTGKTLFAKK 189
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 28.1 bits (61), Expect = 4.8
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 9 GPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEV-RQGGRRIGFDVVTLSGTRGP---LSR 64
G PGVGKTTL ++ K V E++ + + + +SG P + +
Sbjct: 37 GKPGVGKTTLARYITQAWKCIRVEALPILEEQIAAETESGVMLQSMLISGQSIPDELVIK 96
Query: 65 VGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNAD 100
+ LE C G + ++ S Q A+ L+ +
Sbjct: 97 LMLEKLNSPEVCHFGYIITEIPSLSQDAMTTLQQIE 132
>gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo
sapiens]
Length = 421
Score = 28.1 bits (61), Expect = 4.8
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 9 GPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEV-RQGGRRIGFDVVTLSGTRGP---LSR 64
G PGVGKTTL ++ K V E++ + + + +SG P + +
Sbjct: 37 GKPGVGKTTLARYITQAWKCIRVEALPILEEQIAAETESGVMLQSMLISGQSIPDELVIK 96
Query: 65 VGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNAD 100
+ LE C G + ++ S Q A+ L+ +
Sbjct: 97 LMLEKLNSPEVCHFGYIITEIPSLSQDAMTTLQQIE 132
>gi|239750047 PREDICTED: similar to neuron navigator 2, partial
[Homo sapiens]
Length = 453
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 3 RHVFLTGPPGVGKTTLIHKASE--VLKSSGVPVDG 35
R + L+GP G GKT L ++ SE VL+ DG
Sbjct: 116 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 150
>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
Length = 1493
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 3 RHVFLTGPPGVGKTTLIHKASE--VLKSSGVPVDG 35
R + L+GP G GKT L ++ SE VL+ DG
Sbjct: 1156 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 1190
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 3 RHVFLTGPPGVGKTTLIHKASE--VLKSSGVPVDG 35
R + L+GP G GKT L ++ SE VL+ DG
Sbjct: 2028 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 2062
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 3 RHVFLTGPPGVGKTTLIHKASE--VLKSSGVPVDG 35
R + L+GP G GKT L ++ SE VL+ DG
Sbjct: 2095 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 2129
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 3 RHVFLTGPPGVGKTTLIHKASE--VLKSSGVPVDG 35
R + L+GP G GKT L ++ SE VL+ DG
Sbjct: 2092 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 2126
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 27.7 bits (60), Expect = 6.2
Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 28/126 (22%)
Query: 19 IHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRV 78
+ +LK G V G +E+V Q R G + V + R P + + PP
Sbjct: 287 LQTGDHILKIGGTNVQGMTSEQVAQVLRNCG-NSVRMLVARDPAGDISVTPP-------- 337
Query: 79 GQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGT 138
ALPV S GPG LF ++ VR+ + G
Sbjct: 338 ----------APAALPVALPTVASKGPG---------SDSSLFETYNVELVRKDGQSLGI 378
Query: 139 IILGTI 144
I+G +
Sbjct: 379 RIVGYV 384
>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
sapiens]
Length = 640
Score = 27.7 bits (60), Expect = 6.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 5 VFLTGPPGVGKTTLIH 20
+ L GPPG GKTTL H
Sbjct: 264 LILWGPPGCGKTTLAH 279
>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
sapiens]
Length = 665
Score = 27.7 bits (60), Expect = 6.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 5 VFLTGPPGVGKTTLIH 20
+ L GPPG GKTTL H
Sbjct: 264 LILWGPPGCGKTTLAH 279
>gi|33519450 NLR family, pyrin domain containing 9 [Homo sapiens]
Length = 991
Score = 27.7 bits (60), Expect = 6.2
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 3 RH-VFLTGPPGVGKTTLIHK 21
RH V L GP G+GKTTL+ K
Sbjct: 145 RHTVVLEGPDGIGKTTLLRK 164
>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
Length = 750
Score = 27.7 bits (60), Expect = 6.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 3 RHVFLTGPPGVGKTTLIH 20
R V L GPPG GKT L H
Sbjct: 193 RGVLLHGPPGCGKTLLAH 210
>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
Length = 856
Score = 27.7 bits (60), Expect = 6.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 3 RHVFLTGPPGVGKTTLIH 20
R V L GPPG GKT L H
Sbjct: 299 RGVLLHGPPGCGKTLLAH 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,295,546
Number of Sequences: 37866
Number of extensions: 394730
Number of successful extensions: 1232
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1195
Number of HSP's gapped (non-prelim): 45
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.