Guide to the Human Genome
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Name: GTPBP3 Sequence: fasta or formatted (471aa) NCBI GI: 193082993
Description:

GTP binding protein 3 (mitochondrial) isoform III

Referenced in:

Additional Guanine Nucleotide-binding Proteins
tRNA Enzymes

Other entries for this name:
alt prot [524aa] GTP binding protein 3 (mitochondrial) isoform IV
alt prot [492aa] GTP binding protein 3 (mitochondrial) isoform V
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         51           2
 C cysteine            1.9          9           1
 D aspartate           5.1         24           2
 E glutamate           6.4         30           2
 F phenylalanine       2.3         11           1
 G glycine            11.3         53           4
 H histidine           3.2         15           2
 I isoleucine          2.3         11           2
 K lysine              1.9          9           1
 L leucine            14.6         69           3
 M methionine          0.2          1           1
 N asparagine          1.5          7           1
 P proline             6.6         31           2
 Q glutamine           3.6         17           1
 R arginine            8.5         40           2
 S serine              6.6         31           2
 T threonine           4.9         23           2
 V valine              7.0         33           3
 W tryptophan          0.8          4           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTP binding protein 3 (mitochondrial) isoform III [... 
GTPBP3                0.986   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.968   GTP binding protein 3 (mitochondrial) isoform IV [H...
GNL3L                 0.015   guanine nucleotide binding protein-like 3 (nucleolar)...
GTPBP5                0.013   GTP binding protein 5 
GNL1                  0.013   guanine nucleotide binding protein-like 1 
MTG1                  0.012   GTP_binding protein 
SIGLEC6               0.011   sialic acid binding Ig-like lectin 6 isoform 2 prec...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 1 ...
ERAL1                 0.011   Era-like 1 
C1orf57               0.009   nucleoside-triphosphatase C1orf57 
C4orf14               0.009   hypothetical protein LOC84273 
ABCD2                 0.008   ATP-binding cassette, sub-family D, member 2 
KAT2B                 0.008   K(lysine) acetyltransferase 2B 
GNL2                  0.008   guanine nucleotide binding protein-like 2 (nucleolar)...
ABCB10                0.008   ATP-binding cassette, sub-family B, member 10 [Homo...
SREBF1                0.008   sterol regulatory element binding transcription fact...
SREBF1                0.008   sterol regulatory element binding transcription fact...
ABCD1                 0.008   ATP-binding cassette, sub-family D (ALD), member 1 [H...
SIGLEC6               0.008   sialic acid binding Ig-like lectin 6 isoform 1 prec...
SIGLEC6               0.008   sialic acid binding Ig-like lectin 6 isoform 3 prec...
CRKRS                 0.008   Cdc2-related kinase, arginine/serine-rich isoform 2...
SFTA2                 0.008   surfactant associated protein G precursor 
SUSD5                 0.008   sushi domain containing 5 
CCDC64B               0.008   coiled-coil domain containing 64B 
SIGLEC5               0.007   sialic acid binding Ig-like lectin 5 
LRRK1                 0.007   leucine-rich repeat kinase 1 
LSG1                  0.007   large subunit GTPase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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