Guide to the Human Genome
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Name: GTPBP3 Sequence: fasta or formatted (492aa) NCBI GI: 193082991
Description:

GTP binding protein 3 (mitochondrial) isoform V

Referenced in:

Additional Guanine Nucleotide-binding Proteins
tRNA Enzymes

Other entries for this name:
alt prot [524aa] GTP binding protein 3 (mitochondrial) isoform IV
alt prot [471aa] GTP binding protein 3 (mitochondrial) isoform III
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         55           2
 C cysteine            1.8          9           1
 D aspartate           5.5         27           2
 E glutamate           6.3         31           2
 F phenylalanine       2.2         11           1
 G glycine            10.8         53           4
 H histidine           3.0         15           2
 I isoleucine          2.4         12           2
 K lysine              1.8          9           1
 L leucine            15.0         74           3
 M methionine          0.4          2           1
 N asparagine          1.4          7           1
 P proline             6.5         32           2
 Q glutamine           3.7         18           1
 R arginine            8.3         41           2
 S serine              6.9         34           2
 T threonine           4.7         23           2
 V valine              6.7         33           3
 W tryptophan          0.8          4           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTP binding protein 3 (mitochondrial) isoform V [Ho... 
GTPBP3                0.982   GTP binding protein 3 (mitochondrial) isoform IV [H...
GTPBP3                0.947   GTP binding protein 3 (mitochondrial) isoform III [...
ERAL1                 0.020   Era-like 1 
GTPBP5                0.016   GTP binding protein 5 
GNL3L                 0.015   guanine nucleotide binding protein-like 3 (nucleolar)...
HTT                   0.014   huntingtin 
GNL1                  0.013   guanine nucleotide binding protein-like 1 
MTG1                  0.012   GTP_binding protein 
SAMD11                0.012   sterile alpha motif domain containing 11 
SIGLEC6               0.011   sialic acid binding Ig-like lectin 6 isoform 2 prec...
SREBF1                0.011   sterol regulatory element binding transcription fact...
SREBF1                0.011   sterol regulatory element binding transcription fact...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 1 ...
NACAD                 0.008   NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
C1orf57               0.008   nucleoside-triphosphatase C1orf57 
C4orf14               0.008   hypothetical protein LOC84273 
MCM7                  0.007   minichromosome maintenance complex component 7 isofo...
MCM7                  0.007   minichromosome maintenance complex component 7 isofo...
NACAD                 0.007   PREDICTED: NAC alpha domain containing 
ABCD2                 0.007   ATP-binding cassette, sub-family D, member 2 
KAT2B                 0.007   K(lysine) acetyltransferase 2B 
GNL2                  0.007   guanine nucleotide binding protein-like 2 (nucleolar)...
ABCB11                0.007   ATP-binding cassette, sub-family B (MDR/TAP), member...
GTPBP4                0.007   G protein-binding protein CRFG 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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