Guide to the Human Genome
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Name: NAV2 Sequence: fasta or formatted (1493aa) NCBI GI: 161169017
Description:

neuron navigator 2 isoform 4

Referenced in:

Neurons

Other entries for this name:
alt prot [2432aa] neuron navigator 2 isoform 1
alt prot [2365aa] neuron navigator 2 isoform 3
alt prot [2429aa] neuron navigator 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         86           3
 C cysteine            0.9         14           1
 D aspartate           5.6         83           2
 E glutamate           5.1         76           2
 F phenylalanine       1.8         27           1
 G glycine             6.4         95           2
 H histidine           2.3         34           2
 I isoleucine          4.0         59           2
 K lysine              5.8         87           4
 L leucine             9.3        139           2
 M methionine          2.2         33           1
 N asparagine          5.2         78           2
 P proline             5.4         81           2
 Q glutamine           3.8         57           2
 R arginine            5.5         82           2
 S serine             16.9        253           4
 T threonine           6.2         92           2
 V valine              4.9         73           2
 W tryptophan          1.3         19           1
 Y tyrosine            1.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuron navigator 2 isoform 4 
NAV2                  0.989   neuron navigator 2 isoform 3 
NAV2                  0.989   neuron navigator 2 isoform 2 
NAV2                  0.988   neuron navigator 2 isoform 1 
NAV3                  0.581   neuron navigator 3 
NAV1                  0.366   neuron navigator 1 
LOC652725             0.337   PREDICTED: similar to neuron navigator 3, partial [...
LOC730427             0.310   PREDICTED: similar to neuron navigator 2, partial [...
LOC730426             0.177   PREDICTED: similar to NAV1 protein 
CTTNBP2               0.032   cortactin binding protein 2 
DSPP                  0.025   dentin sialophosphoprotein preproprotein 
MUC21                 0.017   mucin 21 
LOC729792             0.016   PREDICTED: hypothetical protein 
LOC100294238          0.016   PREDICTED: hypothetical protein 
LOC100294204          0.016   PREDICTED: hypothetical protein 
LOC730401             0.016   PREDICTED: hypothetical protein 
LOC729792             0.016   PREDICTED: hypothetical protein 
LOC100294501          0.016   PREDICTED: hypothetical protein 
LOC100294249          0.016   PREDICTED: hypothetical protein XP_002344067 
MUC17                 0.015   mucin 17 
LOC729792             0.014   PREDICTED: hypothetical protein 
LOC100294136          0.014   PREDICTED: hypothetical protein 
LOC100294091          0.014   PREDICTED: hypothetical protein 
MUC4                  0.014   mucin 4 isoform a 
MED1                  0.012   mediator complex subunit 1 
MUC12                 0.012   PREDICTED: mucin 12 
SRRM2                 0.012   splicing coactivator subunit SRm300 
MUC16                 0.011   mucin 16 
MUC12                 0.011   PREDICTED: mucin 12 
MUC12                 0.011   PREDICTED: mucin 12, cell surface associated 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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