Guide to the Human Genome
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Name: GTPBP3 Sequence: fasta or formatted (524aa) NCBI GI: 193082988
Description:

GTP binding protein 3 (mitochondrial) isoform IV

Referenced in:

Additional Guanine Nucleotide-binding Proteins
tRNA Enzymes

Other entries for this name:
alt prot [492aa] GTP binding protein 3 (mitochondrial) isoform V
alt prot [471aa] GTP binding protein 3 (mitochondrial) isoform III
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         56           2
 C cysteine            1.9         10           1
 D aspartate           5.2         27           2
 E glutamate           5.9         31           2
 F phenylalanine       2.1         11           1
 G glycine            10.7         56           4
 H histidine           3.1         16           2
 I isoleucine          2.5         13           2
 K lysine              1.9         10           1
 L leucine            15.1         79           3
 M methionine          0.4          2           1
 N asparagine          1.3          7           1
 P proline             6.9         36           2
 Q glutamine           3.6         19           1
 R arginine            8.2         43           2
 S serine              7.6         40           2
 T threonine           5.0         26           2
 V valine              6.3         33           3
 W tryptophan          1.3          7           3
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTP binding protein 3 (mitochondrial) isoform IV [H... 
GTPBP3                0.915   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.867   GTP binding protein 3 (mitochondrial) isoform III [...
ERAL1                 0.020   Era-like 1 
GTPBP5                0.015   GTP binding protein 5 
GNL3L                 0.014   guanine nucleotide binding protein-like 3 (nucleolar)...
SAMD11                0.014   sterile alpha motif domain containing 11 
MTG1                  0.011   GTP_binding protein 
SIGLEC6               0.010   sialic acid binding Ig-like lectin 6 isoform 2 prec...
GNL2                  0.010   guanine nucleotide binding protein-like 2 (nucleolar)...
GNL1                  0.010   guanine nucleotide binding protein-like 1 
GNL3                  0.010   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.010   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.010   guanine nucleotide binding protein-like 3 isoform 1 ...
NACAD                 0.008   NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
C1orf57               0.008   nucleoside-triphosphatase C1orf57 
SREBF1                0.008   sterol regulatory element binding transcription fact...
SREBF1                0.008   sterol regulatory element binding transcription fact...
C4orf14               0.008   hypothetical protein LOC84273 
MCM7                  0.007   minichromosome maintenance complex component 7 isofo...
MCM7                  0.007   minichromosome maintenance complex component 7 isofo...
ABCD1                 0.007   ATP-binding cassette, sub-family D (ALD), member 1 [H...
NACAD                 0.007   PREDICTED: NAC alpha domain containing 
ABCD2                 0.007   ATP-binding cassette, sub-family D, member 2 
KAT2B                 0.007   K(lysine) acetyltransferase 2B 
ABCB11                0.007   ATP-binding cassette, sub-family B (MDR/TAP), member...
GTPBP4                0.007   G protein-binding protein CRFG 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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