Guide to the Human Genome
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Name: NAV2 Sequence: fasta or formatted (2429aa) NCBI GI: 38044282
Description:

neuron navigator 2 isoform 2

Referenced in:

Neurons

Other entries for this name:
alt prot [2432aa] neuron navigator 2 isoform 1
alt prot [2365aa] neuron navigator 2 isoform 3
alt prot [1493aa] neuron navigator 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6        161           3
 C cysteine            0.9         23           1
 D aspartate           4.8        117           2
 E glutamate           5.4        130           2
 F phenylalanine       1.7         41           2
 G glycine             7.0        169           2
 H histidine           2.1         51           2
 I isoleucine          3.6         87           2
 K lysine              6.3        153           4
 L leucine             8.7        212           2
 M methionine          2.2         53           1
 N asparagine          4.7        113           2
 P proline             6.9        168           5
 Q glutamine           4.7        114           5
 R arginine            5.4        130           2
 S serine             15.6        380           6
 T threonine           6.3        153           2
 V valine              4.7        114           2
 W tryptophan          0.9         21           1
 Y tyrosine            1.6         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuron navigator 2 isoform 2 
NAV2                  0.999   neuron navigator 2 isoform 1 
NAV2                  0.963   neuron navigator 2 isoform 3 
NAV2                  0.606   neuron navigator 2 isoform 4 
NAV3                  0.505   neuron navigator 3 
NAV1                  0.247   neuron navigator 1 
LOC652725             0.206   PREDICTED: similar to neuron navigator 3, partial [...
LOC730427             0.190   PREDICTED: similar to neuron navigator 2, partial [...
LOC730426             0.109   PREDICTED: similar to NAV1 protein 
CTTNBP2               0.020   cortactin binding protein 2 
DSPP                  0.016   dentin sialophosphoprotein preproprotein 
MUC12                 0.015   PREDICTED: mucin 12 
LOC729792             0.014   PREDICTED: hypothetical protein 
LOC100294136          0.014   PREDICTED: hypothetical protein 
LOC100294091          0.014   PREDICTED: hypothetical protein 
LOC100294249          0.014   PREDICTED: hypothetical protein XP_002344067 
LOC729792             0.014   PREDICTED: hypothetical protein 
LOC729792             0.014   PREDICTED: hypothetical protein 
LOC100294501          0.014   PREDICTED: hypothetical protein 
LOC100294238          0.014   PREDICTED: hypothetical protein 
LOC100294204          0.014   PREDICTED: hypothetical protein 
LOC730401             0.014   PREDICTED: hypothetical protein 
MUC12                 0.013   PREDICTED: mucin 12, cell surface associated 
DIXDC1                0.012   DIX domain containing 1 isoform a 
MUC21                 0.010   mucin 21 
NOLC1                 0.010   nucleolar and coiled-body phosphoprotein 1 
MUC16                 0.010   mucin 16 
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
PRG4                  0.009   proteoglycan 4 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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