Guide to the Human Genome
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Name: ARL4D Sequence: fasta or formatted (201aa) NCBI GI: 41327767
Description:

ADP-ribosylation factor-like 4D

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         20           3
 C cysteine            0.5          1           1
 D aspartate           3.5          7           1
 E glutamate           7.0         14           2
 F phenylalanine       3.5          7           1
 G glycine             9.0         18           2
 H histidine           2.5          5           1
 I isoleucine          2.5          5           1
 K lysine              7.0         14           2
 L leucine            11.9         24           2
 M methionine          1.5          3           1
 N asparagine          2.0          4           1
 P proline             3.5          7           1
 Q glutamine           5.0         10           2
 R arginine            8.5         17           2
 S serine              5.5         11           2
 T threonine           5.0         10           1
 V valine              9.5         19           3
 W tryptophan          1.0          2           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 4D 
ARL4A                 0.610   ADP-ribosylation factor-like 4A 
ARL4A                 0.610   ADP-ribosylation factor-like 4A 
ARL4A                 0.610   ADP-ribosylation factor-like 4A 
ARL4C                 0.569   ADP-ribosylation factor-like 4C 
ARL14                 0.336   ADP-ribosylation factor-like 14 
ARF3                  0.320   ADP-ribosylation factor 3 
ARF1                  0.317   ADP-ribosylation factor 1 
ARF1                  0.317   ADP-ribosylation factor 1 
ARF1                  0.317   ADP-ribosylation factor 1 
ARF1                  0.317   ADP-ribosylation factor 1 
ARF5                  0.317   ADP-ribosylation factor 5 
TRIM23                0.312   ADP-ribosylation factor domain protein 1 isoform alph...
ARF6                  0.304   ADP-ribosylation factor 6 
ARF4                  0.304   ADP-ribosylation factor 4 
ARL11                 0.290   ADP-ribosylation factor-like 11 
TRIM23                0.282   ADP-ribosylation factor domain protein 1 isoform bet...
ARL5B                 0.268   ADP-ribosylation factor-like 8 
ARL3                  0.263   ADP-ribosylation factor-like 3 
TRIM23                0.257   ADP-ribosylation factor domain protein 1 isoform gam...
ARL2                  0.249   ADP-ribosylation factor-like 2 
ARL1                  0.241   ADP-ribosylation factor-like 1 
ARL5A                 0.236   ADP-ribosylation factor-like 5A isoform 1 
ARL8A                 0.203   ADP-ribosylation factor-like 8A 
ARL8B                 0.195   ADP-ribosylation factor-like 10C 
ARL13B                0.190   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
SAR1A                 0.187   SAR1a gene homolog 1 
SAR1A                 0.187   SAR1a gene homolog 1 
ARFRP1                0.187   ADP-ribosylation factor related protein 1 isoform a [...
SAR1B                 0.182   SAR1a gene homolog 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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