Guide to the Human Genome
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Name: AKD1 Sequence: fasta or formatted (421aa) NCBI GI: 21450759
Description:

adenylate kinase domain containing 1 isoform 2

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [1911aa] adenylate kinase domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         20           2
 C cysteine            2.1          9           1
 D aspartate           4.0         17           1
 E glutamate          12.1         51           8
 F phenylalanine       2.9         12           1
 G glycine             4.8         20           1
 H histidine           1.4          6           2
 I isoleucine          7.4         31           2
 K lysine              7.4         31           4
 L leucine            10.9         46           2
 M methionine          3.1         13           1
 N asparagine          5.2         22           2
 P proline             5.9         25           2
 Q glutamine           5.0         21           2
 R arginine            3.8         16           1
 S serine              4.5         19           2
 T threonine           4.8         20           2
 V valine              4.8         20           2
 W tryptophan          1.0          4           1
 Y tyrosine            4.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenylate kinase domain containing 1 isoform 2 [Homo... 
AKD1                  0.995   adenylate kinase domain containing 1 isoform 1 [Hom...
AK2                   0.045   adenylate kinase 2 isoform a 
AK2                   0.045   adenylate kinase 2 isoform b 
AK3L1                 0.040   adenylate kinase 3-like 1 isoform 7 
AK3L1                 0.040   adenylate kinase 3-like 1 isoform 5 
AK3L1                 0.040   adenylate kinase 3-like 1 isoform 6 
AK3                   0.036   adenylate kinase 3 
C9orf98               0.036   putative adenylate kinase-like protein C9orf98 [Homo...
AK5                   0.021   adenylate kinase 5 isoform 1 
AK5                   0.021   adenylate kinase 5 isoform 2 
CNGB1                 0.021   cyclic nucleotide gated channel beta 1 isoform a [H...
YTHDC1                0.019   splicing factor YT521-B isoform 2 
YTHDC1                0.019   splicing factor YT521-B isoform 1 
C1orf125              0.019   hypothetical protein LOC126859 isoform 1 
KIAA1407              0.018   hypothetical protein LOC57577 
SHROOM4               0.018   shroom family member 4 
AK7                   0.017   adenylate kinase 7 
LOC283685             0.017   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GRIPAP1               0.017   GRIP1 associated protein 1 isoform 1 
MYT1                  0.017   myelin transcription factor 1 
LOC100294088          0.016   PREDICTED: hypothetical protein, partial 
C12orf12              0.016   hypothetical protein LOC196477 
MYCL1                 0.016   l-myc-1 proto-oncogene isoform 1 
MYCL1                 0.016   l-myc-1 proto-oncogene isoform 1 
CENPB                 0.016   centromere protein B 
RGNEF                 0.016   Rho-guanine nucleotide exchange factor 
NOC3L                 0.016   nucleolar complex associated 3 homolog 
WDR87                 0.014   NYD-SP11 protein 
HMGB1                 0.014   high-mobility group box 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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