Guide to the Human Genome
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Name: C1orf57 Sequence: fasta or formatted (190aa) NCBI GI: 14150100
Description:

nucleoside-triphosphatase C1orf57

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          6           1
 C cysteine            2.1          4           1
 D aspartate           3.7          7           1
 E glutamate           5.8         11           2
 F phenylalanine       3.7          7           1
 G glycine            10.0         19           2
 H histidine           1.6          3           1
 I isoleucine          5.3         10           2
 K lysine              5.8         11           1
 L leucine             9.5         18           2
 M methionine          1.1          2           1
 N asparagine          2.6          5           1
 P proline             7.4         14           3
 Q glutamine           4.2          8           1
 R arginine            7.9         15           2
 S serine              6.3         12           2
 T threonine           6.8         13           2
 V valine             12.1         23           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoside-triphosphatase C1orf57 
SPATA5L1              0.025   spermatogenesis associated 5-like 1 
ARL4D                 0.023   ADP-ribosylation factor-like 4D 
PAPSS2                0.023   3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso...
PAPSS2                0.023   3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso...
GTPBP3                0.023   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.023   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.023   GTP binding protein 3 (mitochondrial) isoform IV [H...
PAPSS1                0.020   3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Ho...
LTBP2                 0.020   latent transforming growth factor beta binding protei...
ATAD5                 0.011   ATPase family, AAA domain containing 5 
DNAH5                 0.011   dynein, axonemal, heavy chain 5 
MMAA                  0.008   methylmalonic aciduria type A precursor 
TAF9                  0.008   TAF9 RNA polymerase II, TATA box binding protein-asso...
ATAD3B                0.008   AAA-ATPase  TOB3 
CHTF18                0.008   CTF18, chromosome transmission fidelity factor 18 ho...
ATAD3C                0.008   ATPase family, AAA domain containing 3C 
AKD1                  0.008   adenylate kinase domain containing 1 isoform 1 [Hom...
AKD1                  0.008   adenylate kinase domain containing 1 isoform 2 [Homo...
LOC730427             0.008   PREDICTED: similar to neuron navigator 2, partial [...
NAV2                  0.008   neuron navigator 2 isoform 4 
NAV2                  0.008   neuron navigator 2 isoform 3 
NAV2                  0.008   neuron navigator 2 isoform 1 
NAV2                  0.008   neuron navigator 2 isoform 2 
INADL                 0.008   InaD-like 
WRNIP1                0.008   Werner helicase interacting protein isoform 2 
WRNIP1                0.008   Werner helicase interacting protein isoform 1 
NLRP9                 0.008   NLR family, pyrin domain containing 9 
NVL                   0.008   nuclear VCP-like isoform 2 
NVL                   0.008   nuclear VCP-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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