Guide to the Human Genome
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Name: PAPSS2 Sequence: fasta or formatted (619aa) NCBI GI: 62912492
Description:

3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform b

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [614aa] 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         42           2
 C cysteine            1.6         10           1
 D aspartate           5.8         36           3
 E glutamate           7.1         44           2
 F phenylalanine       3.9         24           2
 G glycine             7.4         46           2
 H histidine           3.6         22           2
 I isoleucine          4.8         30           2
 K lysine              6.8         42           2
 L leucine             9.4         58           3
 M methionine          2.7         17           1
 N asparagine          3.6         22           1
 P proline             5.5         34           2
 Q glutamine           2.9         18           2
 R arginine            6.6         41           3
 S serine              4.8         30           1
 T threonine           5.0         31           2
 V valine              7.3         45           2
 W tryptophan          1.6         10           1
 Y tyrosine            2.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 
PAPSS2                0.987   3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso...
PAPSS1                0.790   3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Ho...
HSPA12B               0.006   heat shock 70kD protein 12B 
C1orf57               0.006   nucleoside-triphosphatase C1orf57 
LRRK1                 0.006   leucine-rich repeat kinase 1 
ARL1                  0.005   ADP-ribosylation factor-like 1 
HDAC10                0.005   histone deacetylase 10 isoform 2 
HDAC10                0.005   histone deacetylase 10 isoform 1 
MCM3                  0.005   minichromosome maintenance complex component 3 
KCNN3                 0.004   small conductance calcium-activated potassium channe...
KCNN3                 0.004   small conductance calcium-activated potassium chann...
GOLGA4                0.004   golgi autoantigen, golgin subfamily a, 4 
DCAF6                 0.004   IQ motif and WD repeats 1 isoform b 
DCAF6                 0.004   IQ motif and WD repeats 1 isoform a 
LOC729417             0.004   PREDICTED: hypothetical protein 
TRIM23                0.004   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.004   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.004   ADP-ribosylation factor domain protein 1 isoform alph...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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