LOC400027 36807

Name: LOC400027	Sequence: fasta or formatted (120aa)		NCBI GI: 89035494
Description: PREDICTED: hypothetical protein LOC400027 isoform 2		Not currently referenced in the text
Other entries for this name: alt mRNA {120aa} PREDICTED: hypothetical protein LOC400027 alt mRNA {120aa} PREDICTED: hypothetical protein LOC400027 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.5 15 3 C cysteine 3.3 4 1 D aspartate 1.7 2 1 E glutamate 4.2 5 2 F phenylalanine 2.5 3 1 G glycine 8.3 10 3 H histidine 5.0 6 1 I isoleucine 3.3 4 1 K lysine 4.2 5 1 L leucine 8.3 10 2 M methionine 3.3 4 1 N asparagine 1.7 2 1 P proline 14.2 17 4 Q glutamine 2.5 3 1 R arginine 8.3 10 2 S serine 7.5 9 1 T threonine 6.7 8 2 V valine 0.0 0 0 W tryptophan 1.7 2 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC400027 isoform 2 ... LOC400027 1.000 PREDICTED: hypothetical protein LOC400027 LOC400027 1.000 PREDICTED: hypothetical protein LOC400027 isoform 4 ... LOC645321 0.051 PREDICTED: hypothetical protein LOC645321 0.051 PREDICTED: hypothetical protein TXLNB 0.043 taxilin beta CPEB2 0.043 cytoplasmic polyadenylation element binding protein ... CPEB2 0.043 cytoplasmic polyadenylation element binding protein ... SPEN 0.043 spen homolog, transcriptional regulator MEX3A 0.034 MEX3A protein HOXA3 0.034 homeobox A3 isoform a HOXA3 0.034 homeobox A3 isoform a LOC100288243 0.034 PREDICTED: hypothetical protein LOC100288243 0.034 PREDICTED: hypothetical protein XP_002342233 TSC22D2 0.030 TSC22 domain family, member 2 HES5 0.030 hairy and enhancer of split 5 SOLH 0.030 small optic lobes LOC728804 0.026 PREDICTED: hypothetical protein FMNL1 0.026 formin-like 1 CCDC87 0.026 coiled-coil domain containing 87 CCDC64B 0.026 coiled-coil domain containing 64B ACOT4 0.026 acyl-CoA thioesterase 4 HS3ST4 0.026 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... POGZ 0.021 pogo transposable element with ZNF domain isoform 1 ... POGZ 0.021 pogo transposable element with ZNF domain isoform 2 ... LOC728804 0.021 PREDICTED: hypothetical protein TAF4 0.021 TBP-associated factor 4 FIGNL2 0.021 fidgetin-like 2 MARCKS 0.021 myristoylated alanine-rich protein kinase C substra... RBM33 0.021 RNA binding motif protein 33 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.