Guide to the Human Genome
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Name: HES5 Sequence: fasta or formatted (166aa) NCBI GI: 58219048
Description:

hairy and enhancer of split 5

Referenced in:

Notch Pathway
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.1         30           6
 C cysteine            1.2          2           1
 D aspartate           2.4          4           1
 E glutamate           6.6         11           1
 F phenylalanine       2.4          4           1
 G glycine             2.4          4           1
 H histidine           3.6          6           1
 I isoleucine          1.8          3           1
 K lysine              8.4         14           1
 L leucine            10.8         18           3
 M methionine          2.4          4           1
 N asparagine          1.8          3           1
 P proline             9.6         16           3
 Q glutamine           5.4          9           1
 R arginine            4.8          8           2
 S serine              7.2         12           2
 T threonine           2.4          4           1
 V valine              4.2          7           2
 W tryptophan          1.8          3           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hairy and enhancer of split 5 
HES4                  0.177   hairy and enhancer of split 4 isoform 2 
HES2                  0.174   hairy and enhancer of split homolog 2 
HES7                  0.171   hairy and enhancer of split 7 
HES4                  0.171   hairy and enhancer of split 4 isoform 1 
HES1                  0.171   hairy and enhancer of split 1 
HEYL                  0.139   hairy/enhancer-of-split related with YRPW motif-like ...
HES3                  0.135   hairy and enhancer of split 3 
HEY1                  0.119   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY1                  0.119   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY2                  0.103   hairy/enhancer-of-split related with YRPW motif 2 [Ho...
HES6                  0.094   hairy and enhancer of split 6 isoform a 
HES6                  0.087   hairy and enhancer of split 6 isoform b 
BHLHE41               0.077   basic helix-loop-helix domain containing, class B, 3...
HELT                  0.074   HES/HEY-like transcription factor 
BHLHE40               0.058   basic helix-loop-helix family, member e40 
HOXA13                0.042   homeobox A13 
TAF4                  0.035   TBP-associated factor 4 
SOHLH2                0.032   spermatogenesis and oogenesis specific basic helix-...
RANBP9                0.032   RAN binding protein 9 
ARNTL2                0.032   aryl hydrocarbon receptor nuclear translocator-like ...
CPEB3                 0.032   cytoplasmic polyadenylation element binding protein ...
ARNTL                 0.029   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.029   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.029   aryl hydrocarbon receptor nuclear translocator-like ...
LOC100294444          0.029   PREDICTED: similar to family with sequence similari...
FAM48B2               0.029   family with sequence similarity 48, member B2 [Homo...
FAM48B1               0.029   hypothetical protein LOC100130302 
C1orf172              0.029   hypothetical protein LOC126695 
SF3A2                 0.026   splicing factor 3a, subunit 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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