Guide to the Human Genome
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Name: ACOT4 Sequence: fasta or formatted (421aa) NCBI GI: 187761341
Description:

acyl-CoA thioesterase 4

Referenced in:

Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         37           1
 C cysteine            2.1          9           2
 D aspartate           3.8         16           2
 E glutamate           5.9         25           2
 F phenylalanine       4.0         17           2
 G glycine            10.0         42           3
 H histidine           3.3         14           1
 I isoleucine          6.4         27           2
 K lysine              4.0         17           1
 L leucine            11.9         50           2
 M methionine          1.4          6           1
 N asparagine          3.1         13           2
 P proline             8.1         34           2
 Q glutamine           3.6         15           1
 R arginine            6.4         27           2
 S serine              5.0         21           2
 T threonine           2.4         10           1
 V valine              5.2         22           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.1         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA thioesterase 4 
ACOT1                 0.708   acyl-CoA thioesterase 1 
ACOT2                 0.707   acyl-CoA thioesterase 2 
BAAT                  0.352   bile acid Coenzyme A: amino acid N-acyltransferase ...
BAAT                  0.352   bile acid Coenzyme A: amino acid N-acyltransferase [H...
ACOT6                 0.243   acyl-CoA thioesterase 6 
LOC400027             0.007   PREDICTED: hypothetical protein LOC400027 
LOC400027             0.007   PREDICTED: hypothetical protein LOC400027 isoform 4 ...
LOC400027             0.007   PREDICTED: hypothetical protein LOC400027 isoform 2 ...
SORCS2                0.007   VPS10 domain receptor protein SORCS 2 
SH3BP2                0.006   SH3-domain binding protein 2 isoform b 
SH3BP2                0.006   SH3-domain binding protein 2 isoform c 
SH3BP2                0.006   SH3-domain binding protein 2 isoform a 
SH3BP2                0.006   SH3-domain binding protein 2 isoform a 
ELN                   0.005   elastin isoform e precursor 
ELN                   0.005   elastin isoform d precursor 
ELN                   0.005   elastin isoform c precursor 
ELN                   0.005   elastin isoform b precursor 
ELN                   0.005   elastin isoform a precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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