CCDC87 6187

Name: CCDC87	Sequence: fasta or formatted (849aa)		NCBI GI: 157388967
Description: coiled-coil domain containing 87		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 52 3 C cysteine 0.8 7 1 D aspartate 3.8 32 2 E glutamate 7.9 67 3 F phenylalanine 3.5 30 2 G glycine 3.9 33 1 H histidine 3.2 27 1 I isoleucine 3.2 27 2 K lysine 6.2 53 2 L leucine 14.6 124 2 M methionine 2.0 17 2 N asparagine 2.9 25 2 P proline 9.0 76 3 Q glutamine 4.7 40 3 R arginine 6.2 53 2 S serine 8.7 74 3 T threonine 4.2 36 2 V valine 5.4 46 3 W tryptophan 1.8 15 1 Y tyrosine 1.8 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 87 SEC31B 0.008 SEC31 homolog B WNK4 0.006 WNK lysine deficient protein kinase 4 MYST3 0.006 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.006 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.006 MYST histone acetyltransferase (monocytic leukemia)... REST 0.005 RE1-silencing transcription factor FAM186A 0.005 family with sequence similarity 186, member A [Homo... IVL 0.005 involucrin TSC22D4 0.005 TSC22 domain family, member 4 NUP88 0.004 nucleoporin 88kDa OGDHL 0.004 oxoglutarate dehydrogenase-like isoform a ATXN7L2 0.004 ataxin 7-like 2 C20orf96 0.004 hypothetical protein LOC140680 ZFHX2 0.004 PREDICTED: zinc finger homeobox 2 ZFHX2 0.004 PREDICTED: zinc finger homeobox 2 ZFHX2 0.004 PREDICTED: zinc finger homeobox 2 HERC2 0.004 hect domain and RLD 2 GNAS 0.004 GNAS complex locus alex LOC400027 0.004 PREDICTED: hypothetical protein LOC400027 LOC400027 0.004 PREDICTED: hypothetical protein LOC400027 isoform 4 ... LOC400027 0.004 PREDICTED: hypothetical protein LOC400027 isoform 2 ... TNS1 0.004 tensin MCM10 0.004 minichromosome maintenance complex component 10 isof... MCM10 0.004 minichromosome maintenance complex component 10 isof... TCEB3 0.004 elongin A MATN4 0.004 matrilin 4 isoform 3 precursor MATN4 0.004 matrilin 4 isoform 2 precursor MATN4 0.004 matrilin 4 isoform 1 precursor KIAA0182 0.004 genetic suppressor element 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.