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Search of human proteins with 7662322
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662322 thymus high mobility group box protein TOX [Homo
sapiens]
(526 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662322 thymus high mobility group box protein TOX [Homo sapi... 1095 0.0
gi|149408144 TOX high mobility group box family member 2 isoform... 397 e-110
gi|226054295 TOX high mobility group box family member 3 isoform... 380 e-105
gi|149408141 TOX high mobility group box family member 2 isoform... 369 e-102
gi|14249636 TOX high mobility group box family member 2 isoform ... 369 e-102
gi|226246533 TOX high mobility group box family member 3 isoform... 365 e-101
gi|149408146 TOX high mobility group box family member 2 isoform... 328 1e-89
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 287 1e-77
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 82 1e-15
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 82 1e-15
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 82 1e-15
gi|4504425 high-mobility group box 1 [Homo sapiens] 80 5e-15
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 77 3e-14
gi|194688135 high-mobility group box 2 [Homo sapiens] 76 9e-14
gi|194688133 high-mobility group box 2 [Homo sapiens] 76 9e-14
gi|11321591 high-mobility group box 2 [Homo sapiens] 76 9e-14
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 75 1e-13
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 74 3e-13
gi|83715964 high-mobility group 20B [Homo sapiens] 71 2e-12
gi|71143137 high-mobility group box 3 [Homo sapiens] 71 3e-12
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 70 5e-12
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 70 5e-12
gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 70 5e-12
gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 70 5e-12
gi|57232750 HMG2 like isoform 1 [Homo sapiens] 65 2e-10
gi|57232748 HMG2 like isoform 2 [Homo sapiens] 65 2e-10
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 64 4e-10
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 64 4e-10
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 64 4e-10
gi|8922633 high-mobility group 20A [Homo sapiens] 63 6e-10
>gi|7662322 thymus high mobility group box protein TOX [Homo
sapiens]
Length = 526
Score = 1095 bits (2831), Expect = 0.0
Identities = 526/526 (100%), Positives = 526/526 (100%)
Query: 1 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG 60
MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG
Sbjct: 1 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG 60
Query: 61 PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHPQNMDLPEITV 120
PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHPQNMDLPEITV
Sbjct: 61 PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHPQNMDLPEITV 120
Query: 121 SNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLT 180
SNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLT
Sbjct: 121 SNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLT 180
Query: 181 TINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPA 240
TINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPA
Sbjct: 181 TINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPA 240
Query: 241 SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWD 300
SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWD
Sbjct: 241 SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWD 300
Query: 301 GLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFH 360
GLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFH
Sbjct: 301 GLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFH 360
Query: 361 GPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVSPPPP 420
GPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVSPPPP
Sbjct: 361 GPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVSPPPP 420
Query: 421 LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQTIINPTS 480
LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQTIINPTS
Sbjct: 421 LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQTIINPTS 480
Query: 481 TAAQVVTQAMEYVRSGCRNPPPQPVDWNNDYCSSGGMQRDKALYLT 526
TAAQVVTQAMEYVRSGCRNPPPQPVDWNNDYCSSGGMQRDKALYLT
Sbjct: 481 TAAQVVTQAMEYVRSGCRNPPPQPVDWNNDYCSSGGMQRDKALYLT 526
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 397 bits (1020), Expect = e-110
Identities = 246/544 (45%), Positives = 323/544 (59%), Gaps = 56/544 (10%)
Query: 1 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG 60
MDVR YP A P A G + LD Y+ KFDG++ Y+ M++ + + + SQ+Y G
Sbjct: 1 MDVRLYPSAPAVGARPGAEPAGLAH-LDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNG 59
Query: 61 PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHP-QNMDLPEIT 119
S +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH + NGLLP + Q MDLP I
Sbjct: 60 QSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIM 119
Query: 120 VSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQL 179
VSNML QD LLS + + ++ + E Y S G+P + +P M+ +
Sbjct: 120 VSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------GRPGPLLGRPAMLA-SHM 168
Query: 180 TTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRP 239
+ ++QSQL +Q+G+ S++ H+SPSPPGSKSATPSPSSS E+E + KI+G EKRP
Sbjct: 169 SALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISG-EKRP 224
Query: 240 ASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMW 299
++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSKIVASMW
Sbjct: 225 SADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMW 284
Query: 300 DGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQ---PPQLINSKP 356
D LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS + + K++Q P +++ K
Sbjct: 285 DSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQ 344
Query: 357 SVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVS 416
++ P A S L S + G +P SL R + K + ++ S
Sbjct: 345 PMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSKS--------LLPGLSAS 389
Query: 417 PPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQT 474
PPPP +SP LHQ L++ H + P P+ + A P + LQ Q
Sbjct: 390 PPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAPQPPVLPTPMALQ--VQL 442
Query: 475 IINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYCSS-------GGMQRDKA 522
++P+ Q E+ S C P P DW++ Y S + RDK+
Sbjct: 443 AMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKS 502
Query: 523 LYLT 526
LYLT
Sbjct: 503 LYLT 506
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 380 bits (976), Expect = e-105
Identities = 242/494 (48%), Positives = 305/494 (61%), Gaps = 48/494 (9%)
Query: 1 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPAS-QSYP 59
MDVRFYP AAA D L + CL Y +KF N YM+M E + + AS Q++
Sbjct: 1 MDVRFYP-----AAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFH 55
Query: 60 GPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNG---LLPFHPQNMDLP 116
PSL E+F IPPITPP D +L + +V + +L P+ G F PQ++DLP
Sbjct: 56 TPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLP 114
Query: 117 EITVS-NMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMP 175
IT+S N++ QDG L S+ + + D + + +QY P + MR D + G+MP
Sbjct: 115 SITISRNLVEQDGVLHSSGLHM--DQSHTQVSQYRQDPSLI-MRSIVHMTDAARS-GVMP 170
Query: 176 HGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGG 235
QLTTINQSQLSAQLGLN+GG+++PH SPSPP SKSATPSPSSS++E++ D+ ++ G
Sbjct: 171 PAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIG- 229
Query: 236 EKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIV 295
EKR A D GKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIV
Sbjct: 230 EKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIV 289
Query: 296 ASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSK 355
ASMWD LGEEQKQVYK+KTEAAKKEYLK LAAYRASLVSK+ +E + +T + Q +
Sbjct: 290 ASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLAS 349
Query: 356 PSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPK------PNNQMPVTVS 409
++ S+L L++ Q ++ + SLPR+IAPK P NQ+ +V+
Sbjct: 350 TNL-------TSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVT 402
Query: 410 I-ANM---------------AVSPPPPLQISPPL--HQH-LNMQQHQPLTMQQPLGNQLP 450
I ANM V P Q+SP + QH + +QQ Q QQ Q
Sbjct: 403 IAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQ 462
Query: 451 MQVQSALHSPTMQQ 464
Q +H QQ
Sbjct: 463 QLQQHQMHQQIQQQ 476
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 369 bits (948), Expect = e-102
Identities = 228/501 (45%), Positives = 300/501 (59%), Gaps = 55/501 (10%)
Query: 44 MTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHN 103
M++ + + + SQ+Y G S +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH + N
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 104 GLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRG 162
GLLP + Q MDLP I VSNML QD LLS + + ++ + E Y S G
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------G 110
Query: 163 QPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVH 222
+P + +P M+ ++ ++QSQL +Q+G+ S++ H+SPSPPGSKSATPSPSSS
Sbjct: 111 RPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQ 166
Query: 223 EDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 282
E+E + KI+G EKRP++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ
Sbjct: 167 EEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 225
Query: 283 NPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVD 342
NP+ATFG+VSKIVASMWD LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS + +
Sbjct: 226 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGE 285
Query: 343 VKTSQ---PPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPK 399
K++Q P +++ K ++ P A S L S + G +P SL R + K
Sbjct: 286 TKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSK 338
Query: 400 PNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSAL 457
+ ++ SPPPP +SP LHQ L++ H + P P+ + A
Sbjct: 339 S--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAP 385
Query: 458 HSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYC 512
P + LQ Q ++P+ Q E+ S C P P DW++ Y
Sbjct: 386 QPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYP 443
Query: 513 SS-------GGMQRDKALYLT 526
S + RDK+LYLT
Sbjct: 444 SGECGISTCSLLPRDKSLYLT 464
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 369 bits (948), Expect = e-102
Identities = 228/501 (45%), Positives = 300/501 (59%), Gaps = 55/501 (10%)
Query: 44 MTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHN 103
M++ + + + SQ+Y G S +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH + N
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 104 GLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRG 162
GLLP + Q MDLP I VSNML QD LLS + + ++ + E Y S G
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------G 110
Query: 163 QPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVH 222
+P + +P M+ ++ ++QSQL +Q+G+ S++ H+SPSPPGSKSATPSPSSS
Sbjct: 111 RPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQ 166
Query: 223 EDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 282
E+E + KI+G EKRP++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ
Sbjct: 167 EEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 225
Query: 283 NPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVD 342
NP+ATFG+VSKIVASMWD LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS + +
Sbjct: 226 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGE 285
Query: 343 VKTSQ---PPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPK 399
K++Q P +++ K ++ P A S L S + G +P SL R + K
Sbjct: 286 TKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSK 338
Query: 400 PNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSAL 457
+ ++ SPPPP +SP LHQ L++ H + P P+ + A
Sbjct: 339 S--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAP 385
Query: 458 HSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYC 512
P + LQ Q ++P+ Q E+ S C P P DW++ Y
Sbjct: 386 QPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYP 443
Query: 513 SS-------GGMQRDKALYLT 526
S + RDK+LYLT
Sbjct: 444 SGECGISTCSLLPRDKSLYLT 464
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 365 bits (937), Expect = e-101
Identities = 226/460 (49%), Positives = 288/460 (62%), Gaps = 42/460 (9%)
Query: 34 KFDGENMYMSMTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGY 93
KF N YM+M E + + AS+++ PSL E+F IPPITPP D +L + +V +
Sbjct: 25 KFGNNNNYMNMAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPF 83
Query: 94 HSLCHPMNHNG---LLPFHPQNMDLPEITVS-NMLGQDGTLLSNSISVMPDIRNPEGTQY 149
+L P+ G F PQ++DLP IT+S N++ QDG L S+ + + D + + +QY
Sbjct: 84 QALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHM--DQSHTQVSQY 141
Query: 150 SSHPQMAAMRPRGQPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPG 209
P + MR D + G+MP QLTTINQSQLSAQLGLN+GG+++PH SPSPP
Sbjct: 142 RQDPSLI-MRSIVHMTDAARS-GVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPA 199
Query: 210 SKSATPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYA 269
SKSATPSPSSS++E++ D+ ++ G EKR A D GKKPKTPKKKKKKDPNEPQKPVSAYA
Sbjct: 200 SKSATPSPSSSINEEDADEANRAIG-EKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYA 258
Query: 270 LFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYR 329
LFFRDTQAAIKGQNPNATFGEVSKIVASMWD LGEEQKQVYK+KTEAAKKEYLK LAAYR
Sbjct: 259 LFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYR 318
Query: 330 ASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMH 389
ASLVSK+ +E + +T + Q + ++ S+L L++ Q ++ +
Sbjct: 319 ASLVSKAAAESAEAQTIRSVQQTLASTNL-------TSSLLLNTPLSQHGTVSASPQTLQ 371
Query: 390 PSLPRNIAPK------PNNQMPVTVSI-ANM---------------AVSPPPPLQISPPL 427
SLPR+IAPK P NQ+ +V+I ANM V P Q+SP +
Sbjct: 372 QSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSV 431
Query: 428 --HQH-LNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQ 464
QH + +QQ Q QQ Q Q +H QQ
Sbjct: 432 QTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQ 471
>gi|149408146 TOX high mobility group box family member 2 isoform b
[Homo sapiens]
Length = 488
Score = 328 bits (840), Expect = 1e-89
Identities = 209/516 (40%), Positives = 283/516 (54%), Gaps = 76/516 (14%)
Query: 26 CLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVH 85
C+ + KFDG++ Y+ M++ + + + SQ+Y G S +ED+ IPPITPP+LP+ SL+H
Sbjct: 34 CIAGVFPQKFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLH 93
Query: 86 LNEVESGYHSLCHPMNHNGLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNP 144
L + E+ YHSLCH + NGLLP + Q MDLP I VSNML QD LLS + + ++ +
Sbjct: 94 LGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHS 153
Query: 145 EGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNS 204
E Y S G+P + +P M+ ++ ++QSQL +Q+G+ S++ H+S
Sbjct: 154 EVAAYDS----------GRPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSS 199
Query: 205 PSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKP 264
PSPPGSKSATPSPSSS E+E + KI+G EKRP++D GKK K PKKKKKKDPNEPQKP
Sbjct: 200 PSPPGSKSATPSPSSSTQEEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKP 258
Query: 265 VSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQ 324
VSAYALFFRDTQAAIKGQNP+ATFG+VSKIVASMWD LGEEQKQ
Sbjct: 259 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQS--------------- 303
Query: 325 LAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPH 384
S E + + P +++ K ++ P A S L S + G +P
Sbjct: 304 ---------SPDQGETKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP- 352
Query: 385 LTAMHPSLPRNIAPKPNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQ 442
SL R + K + ++ SPPPP +SP LHQ L++ H +
Sbjct: 353 -----ASLARTLGSKS--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALL 399
Query: 443 QPLGNQLPMQVQSALHSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNP 500
P P+ + A P + LQ Q ++P+ Q E+ S C
Sbjct: 400 SP-----PVSMSPAPQPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPG 452
Query: 501 PPQPV---DWNNDYCSS-------GGMQRDKALYLT 526
P P DW++ Y S + RDK+LYLT
Sbjct: 453 PSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 287 bits (735), Expect = 1e-77
Identities = 208/600 (34%), Positives = 295/600 (49%), Gaps = 133/600 (22%)
Query: 37 GENMYMSMTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSL 96
G + Y+++T PS ++ ++++ PSL E+F IPPI+ S P + +++V + L
Sbjct: 6 GNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDL 62
Query: 97 CHPMNHNG---LLPFHPQNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHP 153
P + + Q +D+P ++ Q G LLS +++ D+ + GTQYS++P
Sbjct: 63 ADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTM--DLDHSIGTQYSANP 120
Query: 154 QMAAMRPRGQPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSA 213
+ P G+M H QLTTI+QS+LS+QLGL++GG + + SP S
Sbjct: 121 PVTIDVPMTDMTS-----GLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLST 175
Query: 214 TPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFR 273
TPSP+SS+HED +D + +K + GKK K PKK+KKKDPNEPQKPVSAYALFFR
Sbjct: 176 TPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFR 235
Query: 274 DTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 333
DTQAAIKGQNPNATFGEVSKIVASMWD LGEEQKQVYK+KTEAAKKEYLK LAAY+ +
Sbjct: 236 DTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQE 295
Query: 334 SKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSA------------------LYLSSHY 375
++ E V++ + P Q + P P+ A Y+++
Sbjct: 296 CQATVETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQA 355
Query: 376 HQQPGMNPHLTAM---HPSLPRNIAPKPNNQ---MPVTV--------------------- 408
G P++T + LP +I +P TV
Sbjct: 356 SSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQ 415
Query: 409 ----------------SIANMAVSP----PPPLQ--ISPPLHQHLN-MQQHQPL-TMQQP 444
+ A+M + P PPPLQ PP Q + +QQ PL MQQP
Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQP 475
Query: 445 LGNQL---------PMQVQSALHSPTMQQGFTL---------------QPDYQTIINPT- 479
++ P+Q++S + PT++ TL P+ T+ P+
Sbjct: 476 PPQKVRINLQQQPPPLQIKS-VPLPTLKMQTTLVPPTVESSPERPMNNSPEAHTVEAPSP 534
Query: 480 STAAQVVTQAM-------------------------EYVRSGCRNPPPQPVDWNNDYCSS 514
T +++T + VRSGC NPP DW+N+YCS+
Sbjct: 535 ETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKDWDNEYCSN 594
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 82.0 bits (201), Expect = 1e-15
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKK KDPN P++P SA+ L+F + IKG+ P +FG+V+K + MW+ +
Sbjct: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ Y+K++ K++Y K +AAYRA
Sbjct: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 82.0 bits (201), Expect = 1e-15
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKK KDPN P++P SA+ L+F + IKG+ P +FG+V+K + MW+ +
Sbjct: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ Y+K++ K++Y K +AAYRA
Sbjct: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 82.0 bits (201), Expect = 1e-15
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKK KDPN P++P SA+ L+F + IKG+ P +FG+V+K + MW+ +
Sbjct: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ Y+K++ K++Y K +AAYRA
Sbjct: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 80.1 bits (196), Expect = 5e-15
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKK KDPN P++P SA+ LF + + IKG++P + G+V+K + MW+ +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 140
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ Y+KK K++Y K +AAYRA
Sbjct: 141 KQPYEKKAAKLKEKYEKDIAAYRA 164
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +P+ +S+YA F + + K ++P+A+ F E SK + W + ++K ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 313 KTEAAKKEYLKQLAAY 328
+A K Y +++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 77.4 bits (189), Expect = 3e-14
Identities = 37/84 (44%), Positives = 52/84 (61%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKKK KDPN P++P A+ LF + + IKG++P + +V K +A MW+
Sbjct: 755 PKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAAD 814
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ Y+KK K++Y K +AAYRA
Sbjct: 815 KQFYEKKAAKLKEKYKKDIAAYRA 838
>gi|194688135 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 75.9 bits (185), Expect = 9e-14
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KK KKKDPN P++P SA+ LF + + IK ++P + G+ +K + MW +
Sbjct: 81 PKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKD 140
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRASLVS----KSYSEPVDVKTSQPPQ 350
KQ Y++K K++Y K +AAYRA S K P K P+
Sbjct: 141 KQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188
Score = 42.7 bits (99), Expect = 8e-04
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312
K DPN+P+ +S+YA F + + K ++P+++ F E SK + W + ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 313 KTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLS 372
++ K Y +++ K+Y P K K + P + SA +L
Sbjct: 63 MAKSDKARYDREM---------KNYVPPKGDK--------KGKKKDPNAPKRPPSAFFLF 105
Query: 373 SHYHQQPGMNPHLTAMHPSL 392
H+ P + + HP L
Sbjct: 106 CSEHR-----PKIKSEHPGL 120
>gi|194688133 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 75.9 bits (185), Expect = 9e-14
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KK KKKDPN P++P SA+ LF + + IK ++P + G+ +K + MW +
Sbjct: 81 PKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKD 140
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRASLVS----KSYSEPVDVKTSQPPQ 350
KQ Y++K K++Y K +AAYRA S K P K P+
Sbjct: 141 KQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188
Score = 42.7 bits (99), Expect = 8e-04
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312
K DPN+P+ +S+YA F + + K ++P+++ F E SK + W + ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 313 KTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLS 372
++ K Y +++ K+Y P K K + P + SA +L
Sbjct: 63 MAKSDKARYDREM---------KNYVPPKGDK--------KGKKKDPNAPKRPPSAFFLF 105
Query: 373 SHYHQQPGMNPHLTAMHPSL 392
H+ P + + HP L
Sbjct: 106 CSEHR-----PKIKSEHPGL 120
>gi|11321591 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 75.9 bits (185), Expect = 9e-14
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KK KKKDPN P++P SA+ LF + + IK ++P + G+ +K + MW +
Sbjct: 81 PKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKD 140
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRASLVS----KSYSEPVDVKTSQPPQ 350
KQ Y++K K++Y K +AAYRA S K P K P+
Sbjct: 141 KQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188
Score = 42.7 bits (99), Expect = 8e-04
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312
K DPN+P+ +S+YA F + + K ++P+++ F E SK + W + ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 313 KTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLS 372
++ K Y +++ K+Y P K K + P + SA +L
Sbjct: 63 MAKSDKARYDREM---------KNYVPPKGDK--------KGKKKDPNAPKRPPSAFFLF 105
Query: 373 SHYHQQPGMNPHLTAMHPSL 392
H+ P + + HP L
Sbjct: 106 CSEHR-----PKIKSEHPGL 120
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 75.5 bits (184), Expect = 1e-13
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 212 SATPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALF 271
+A+ S SS+ + + D+ + + + A D + K + KK KDPN P++P+SAY L+
Sbjct: 498 NASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLW 557
Query: 272 FRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRAS 331
++ IK +P + ++SK +W G+ +E+K+ + +K E A+++Y K + Y
Sbjct: 558 LNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGG 617
Query: 332 LVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSSHY 375
+S K + + K + G S S+ LS +
Sbjct: 618 R-GESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 660
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 74.3 bits (181), Expect = 3e-13
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306
PK KKK KDPN P++P SA+ LF + IKG++P + G+V+K + MW+ +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 140
Query: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330
KQ +KK K++Y K +AAY+A
Sbjct: 141 KQPGEKKAAKLKEKYEKDIAAYQA 164
Score = 38.9 bits (89), Expect = 0.012
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 30/143 (20%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +P+ +S+YA F + + K ++ +A+ F E S + W + ++K ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
Query: 313 KTEAAKKEYLKQLAAY--RASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALY 370
+A K Y +Q+ Y K + +P + P + SA +
Sbjct: 63 MAKADKTHYERQMKTYIPPKGETKKKFKDP-------------------NAPKRPPSAFF 103
Query: 371 L-SSHYHQQPGMNPHLTAMHPSL 392
L S YH P + HP L
Sbjct: 104 LFCSEYH------PKIKGEHPGL 120
>gi|83715964 high-mobility group 20B [Homo sapiens]
Length = 317
Score = 71.2 bits (173), Expect = 2e-12
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 203 NSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTP---------KKK 253
+ P PG+ +A + T K GE A + G + P KK+
Sbjct: 3 HGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKR 62
Query: 254 KKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKK 313
KK PN P+ PV+ Y F + + I+ ++P+ F E++K++ + W L +KQ Y +
Sbjct: 63 KKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDE 122
Query: 314 TEAAKKEYLKQLAAYRASLVSKSYSEPVDVK 344
E K++Y+K+L AY+ S K +E + K
Sbjct: 123 AEREKQQYMKELRAYQQSEAYKMCTEKIQEK 153
>gi|71143137 high-mobility group box 3 [Homo sapiens]
Length = 200
Score = 70.9 bits (172), Expect = 3e-12
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 232 INGGEKRPASDMGKKPKT----------PKK--KKKKDPNEPQKPVSAYALFFRDTQAAI 279
++G EK +M K K P K KKKKDPN P++P S + LF + + I
Sbjct: 52 MSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKI 111
Query: 280 KGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRA 330
K NP + G+V+K + MW+ L + +KQ Y K K++Y K +A Y++
Sbjct: 112 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKS 162
Score = 43.5 bits (101), Expect = 5e-04
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPN--ATFGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +P+ +SAYA F + + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
Query: 313 KTEAAKKEYLKQLAAYRASLVSKSYSEP 340
+A K Y +++ Y + K +P
Sbjct: 63 MAKADKVRYDREMKDYGPAKGGKKKKDP 90
>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 70.1 bits (170), Expect = 5e-12
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 226 GDDTSKINGGEKRPASDMGKKPKTPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQN 283
G + SK + K ++ K P K KKKKDP+ P++P S + LF + + IK N
Sbjct: 51 GKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTN 110
Query: 284 PNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLA 326
P + G+V+K + MW+ L + +KQ Y KT K++Y K +A
Sbjct: 111 PGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.13
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKT 314
K DP +P+ +SAY F + + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 315 EAAK 318
+ K
Sbjct: 62 KTDK 65
>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 70.1 bits (170), Expect = 5e-12
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 226 GDDTSKINGGEKRPASDMGKKPKTPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQN 283
G + SK + K ++ K P K KKKKDP+ P++P S + LF + + IK N
Sbjct: 51 GKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTN 110
Query: 284 PNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLA 326
P + G+V+K + MW+ L + +KQ Y KT K++Y K +A
Sbjct: 111 PGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.13
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKT 314
K DP +P+ +SAY F + + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 315 EAAK 318
+ K
Sbjct: 62 KTDK 65
>gi|239742753 PREDICTED: similar to high mobility group box 3
isoform 2 [Homo sapiens]
Length = 183
Score = 70.1 bits (170), Expect = 5e-12
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 226 GDDTSKINGGEKRPASDMGKKPKTPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQN 283
G + SK + K ++ K P K KKKKDP+ P++P S + LF + + IK N
Sbjct: 33 GKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTN 92
Query: 284 PNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLA 326
P + G+V+K + MW+ L + +KQ Y KT K++Y K +A
Sbjct: 93 PGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVA 135
>gi|113416897 PREDICTED: similar to high mobility group box 3
isoform 1 [Homo sapiens]
Length = 201
Score = 70.1 bits (170), Expect = 5e-12
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 226 GDDTSKINGGEKRPASDMGKKPKTPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQN 283
G + SK + K ++ K P K KKKKDP+ P++P S + LF + + IK N
Sbjct: 51 GKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTN 110
Query: 284 PNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLA 326
P + G+V+K + MW+ L + +KQ Y KT K++Y K +A
Sbjct: 111 PGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.13
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKT 314
K DP +P+ +SAY F + + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 315 EAAK 318
+ K
Sbjct: 62 KTDK 65
>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
Length = 186
Score = 64.7 bits (156), Expect = 2e-10
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 251 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVY 310
KK++K+DP EP++P S++ LF +D A +K +NPN + +V+K MW + +K Y
Sbjct: 83 KKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPY 142
Query: 311 KKKTEAAKKEYLKQLAAYR 329
+++ + +Y ++L YR
Sbjct: 143 EQRVALLRAKYFEELELYR 161
Score = 35.4 bits (80), Expect = 0.13
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 19/127 (14%)
Query: 260 EPQKPVSAYALFFRDTQAAIKGQNPNATFG--EVSKIVASMWDGLGEEQKQVYKKKTEAA 317
+P+ VS+Y F + + K Q PN G E S+ + W + + +K Y+ +
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 318 KKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSSHYHQ 377
K Y +++ Y V K + + PQ PS F L+ HY Q
Sbjct: 68 KARYQEEMMNY----VGKRKK-----RRKRDPQEPRRPPSSF--------LLFCQDHYAQ 110
Query: 378 QPGMNPH 384
NP+
Sbjct: 111 LKRENPN 117
>gi|57232748 HMG2 like isoform 2 [Homo sapiens]
Length = 112
Score = 64.7 bits (156), Expect = 2e-10
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 251 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVY 310
KK++K+DP EP++P S++ LF +D A +K +NPN + +V+K MW + +K Y
Sbjct: 9 KKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPY 68
Query: 311 KKKTEAAKKEYLKQLAAYR 329
+++ + +Y ++L YR
Sbjct: 69 EQRVALLRAKYFEELELYR 87
>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 251 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVY 310
K KKKDPN P++P S + LF + + IK NP + G+V+K + MW+ L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 311 KKKTEAAKKEYLKQL 325
K K++Y K +
Sbjct: 142 VTKAAKLKEKYEKDV 156
Score = 34.7 bits (78), Expect = 0.22
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPN--ATFGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +PQ +SAYA + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 313 KTEAAKKEYLKQLAAY 328
+A + Y +++ Y
Sbjct: 63 MAKADEVCYDREMKDY 78
>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 251 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVY 310
K KKKDPN P++P S + LF + + IK NP + G+V+K + MW+ L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 311 KKKTEAAKKEYLKQL 325
K K++Y K +
Sbjct: 142 VTKAAKLKEKYEKDV 156
Score = 34.7 bits (78), Expect = 0.22
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPN--ATFGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +PQ +SAYA + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 313 KTEAAKKEYLKQLAAY 328
+A + Y +++ Y
Sbjct: 63 MAKADEVCYDREMKDY 78
>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 251 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVY 310
K KKKDPN P++P S + LF + + IK NP + G+V+K + MW+ L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 311 KKKTEAAKKEYLKQL 325
K K++Y K +
Sbjct: 142 VTKAAKLKEKYEKDV 156
Score = 34.7 bits (78), Expect = 0.22
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPN--ATFGEVSKIVASMWDGLGEEQKQVYKK 312
K DP +PQ +SAYA + K +NP F E SK + W + ++K + +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 313 KTEAAKKEYLKQLAAY 328
+A + Y +++ Y
Sbjct: 63 MAKADEVCYDREMKDY 78
>gi|8922633 high-mobility group 20A [Homo sapiens]
Length = 347
Score = 63.2 bits (152), Expect = 6e-10
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 203 NSPSPPGSKSATPSPSSSVHEDE--------GDDTSKINGGEKRPASDMGKK----PKTP 250
N P P S AT S ++ ++ + ++ G E+R + K K
Sbjct: 32 NHPEVPYSSGATSSTNNPEFVEDLSQGQLLQSESSNAAEGNEQRHEDEQRSKRGGWSKGR 91
Query: 251 KKKKK-KDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQV 309
K+KK +D N P+ P++ Y F + + ++ + P F E+++++ + W L E+KQ
Sbjct: 92 KRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQR 151
Query: 310 YKKKTEAAKKEYLKQLAAYRASLVSKSYS 338
Y + + K+ Y+K+L Y+ + K +S
Sbjct: 152 YLDEADRDKERYMKELEQYQKTEAYKVFS 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,435,173
Number of Sequences: 37866
Number of extensions: 1477959
Number of successful extensions: 9059
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 7737
Number of HSP's gapped (non-prelim): 1586
length of query: 526
length of database: 18,247,518
effective HSP length: 107
effective length of query: 419
effective length of database: 14,195,856
effective search space: 5948063664
effective search space used: 5948063664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.