HMGB4 33298

Name: HMGB4	Sequence: fasta or formatted (112aa)		NCBI GI: 57232748
Description: HMG2 like isoform 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [186aa] HMG2 like isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 8 1 C cysteine 2.7 3 1 D aspartate 2.7 3 1 E glutamate 6.2 7 2 F phenylalanine 2.7 3 1 G glycine 2.7 3 1 H histidine 1.8 2 1 I isoleucine 0.0 0 0 K lysine 11.6 13 2 L leucine 7.1 8 2 M methionine 3.6 4 2 N asparagine 4.5 5 1 P proline 5.4 6 2 Q glutamine 6.2 7 1 R arginine 15.2 17 2 S serine 5.4 6 2 T threonine 2.7 3 1 V valine 5.4 6 2 W tryptophan 1.8 2 1 Y tyrosine 5.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HMG2 like isoform 2 HMGB4 1.000 HMG2 like isoform 1 HMGB2 0.300 high-mobility group box 2 HMGB2 0.300 high-mobility group box 2 HMGB2 0.300 high-mobility group box 2 HMGB1 0.248 high-mobility group box 1 HMGB3 0.248 high-mobility group box 3 LOC646993 0.238 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.238 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.238 PREDICTED: similar to high mobility group box 3 [Ho... LOC441795 0.233 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.233 PREDICTED: high mobility group protein B3-like prot... HMGB1L1 0.233 high-mobility group box 1-like 1 LOC645490 0.214 PREDICTED: similar to hCG1991922 LOC645490 0.214 PREDICTED: similar to hCG1991922 LOC645490 0.214 PREDICTED: similar to hCG1991922 SP100 0.210 nuclear antigen Sp100 isoform 2 LOC729595 0.210 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.210 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.210 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.210 PREDICTED: similar to high mobility group box 3 iso... TOX4 0.195 epidermal Langerhans cell protein LCP1 LOC203510 0.190 PREDICTED: similar to hCG1644442 LOC203510 0.190 PREDICTED: similar to hCG1644442 LOC203510 0.190 PREDICTED: hypothetical protein LOC203510 TOX3 0.190 TOX high mobility group box family member 3 isoform... TOX3 0.190 TOX high mobility group box family member 3 isoform... TOX 0.190 thymus high mobility group box protein TOX LOC644129 0.176 PREDICTED: similar to hCG1647425 LOC644129 0.176 PREDICTED: similar to hCG1647425 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.