HMGB4 33299

Name: HMGB4	Sequence: fasta or formatted (186aa)		NCBI GI: 57232750
Description: HMG2 like isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [112aa] HMG2 like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 13 1 C cysteine 2.2 4 1 D aspartate 2.2 4 1 E glutamate 8.1 15 2 F phenylalanine 3.8 7 1 G glycine 2.7 5 1 H histidine 2.2 4 1 I isoleucine 1.1 2 1 K lysine 14.0 26 2 L leucine 7.0 13 2 M methionine 2.7 5 2 N asparagine 4.8 9 1 P proline 4.3 8 2 Q glutamine 5.9 11 2 R arginine 11.3 21 2 S serine 6.5 12 2 T threonine 2.2 4 1 V valine 4.8 9 2 W tryptophan 1.6 3 1 Y tyrosine 5.9 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HMG2 like isoform 1 HMGB4 0.583 HMG2 like isoform 2 HMGB2 0.375 high-mobility group box 2 HMGB2 0.375 high-mobility group box 2 HMGB2 0.375 high-mobility group box 2 HMGB1 0.350 high-mobility group box 1 HMGB3 0.331 high-mobility group box 3 LOC441795 0.319 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.319 PREDICTED: high mobility group protein B3-like prot... HMGB1L1 0.317 high-mobility group box 1-like 1 LOC646993 0.278 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.278 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.278 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.269 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.269 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.269 PREDICTED: similar to high mobility group box 3 iso... LOC203510 0.267 PREDICTED: similar to hCG1644442 LOC203510 0.267 PREDICTED: similar to hCG1644442 LOC203510 0.267 PREDICTED: hypothetical protein LOC203510 SP100 0.264 nuclear antigen Sp100 isoform 2 LOC645490 0.242 PREDICTED: similar to hCG1991922 LOC645490 0.242 PREDICTED: similar to hCG1991922 LOC645490 0.242 PREDICTED: similar to hCG1991922 LOC729595 0.217 PREDICTED: similar to high mobility group box 3 iso... LOC644129 0.131 PREDICTED: similar to hCG1647425 LOC644129 0.131 PREDICTED: similar to hCG1647425 TOX4 0.114 epidermal Langerhans cell protein LCP1 TOX3 0.111 TOX high mobility group box family member 3 isoform... TOX3 0.111 TOX high mobility group box family member 3 isoform... TOX 0.111 thymus high mobility group box protein TOX Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.