TAF5L 34894

Name: TAF5L	Sequence: fasta or formatted (325aa)		NCBI GI: 69122931
Description: PCAF associated factor 65 beta isoform b		Referenced in: RNA Polymerase and General Transcription Factors WD Repeat Proteins
Other entries for this name: alt prot [589aa] PCAF associated factor 65 beta isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 20 2 C cysteine 2.2 7 1 D aspartate 5.2 17 1 E glutamate 6.5 21 3 F phenylalanine 3.4 11 1 G glycine 2.8 9 1 H histidine 2.5 8 1 I isoleucine 4.3 14 1 K lysine 4.9 16 2 L leucine 12.3 40 2 M methionine 1.8 6 1 N asparagine 5.2 17 2 P proline 4.6 15 2 Q glutamine 8.0 26 2 R arginine 4.9 16 2 S serine 9.8 32 3 T threonine 4.6 15 2 V valine 6.2 20 2 W tryptophan 0.3 1 1 Y tyrosine 4.3 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PCAF associated factor 65 beta isoform b TAF5L 0.997 PCAF associated factor 65 beta isoform a TAF5 0.166 TBP-associated factor 5 KANK4 0.021 ankyrin repeat domain 38 KATNB1 0.019 katanin p80 subunit B 1 PPP2R3A 0.013 protein phosphatase 2, regulatory subunit B'', alpha... CHAF1B 0.011 chromatin assembly factor 1 subunit B TBL1X 0.011 transducin beta-like 1X isoform b TBL1X 0.011 transducin beta-like 1X isoform b TBL1X 0.011 transducin beta-like 1X isoform a TBL1X 0.011 transducin beta-like 1X isoform a SMU1 0.011 smu-1 suppressor of mec-8 and unc-52 homolog NLE1 0.011 Notchless gene homolog isoform a ANKRD26 0.010 ankyrin repeat domain 26 APOB 0.010 apolipoprotein B precursor ATG16L1 0.010 APG16 autophagy 16-like isoform 1 ATG16L1 0.010 APG16 autophagy 16-like isoform 2 TBL1XR1 0.008 transducin (beta)-like 1 X-linked receptor 1 WDR38 0.008 WD repeat domain 38 KIAA1109 0.008 fragile site-associated protein WSB2 0.008 WD SOCS-box protein 2 NLE1 0.008 Notchless gene homolog isoform b TBL3 0.008 transducin beta-like 3 WDR51B 0.008 WD repeat domain 51B ABCA1 0.006 ATP-binding cassette, sub-family A member 1 NPLOC4 0.006 nuclear protein localization 4 LOC643677 0.006 hypothetical protein LOC643677 LOC643677 0.006 PREDICTED: hypothetical protein LOC643677 LOC643677 0.006 PREDICTED: hypothetical protein LOC643677 LOC643677 0.006 PREDICTED: hypothetical protein LOC643677 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.