LHX3 35710

Name: LHX3	Sequence: fasta or formatted (402aa)		NCBI GI: 7657303
Description: LIM homeobox protein 3 isoform b		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [397aa] LIM homeobox protein 3 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 37 2 C cysteine 3.2 13 1 D aspartate 6.0 24 2 E glutamate 6.0 24 1 F phenylalanine 3.5 14 2 G glycine 9.2 37 2 H histidine 2.2 9 1 I isoleucine 1.2 5 1 K lysine 5.0 20 2 L leucine 10.0 40 3 M methionine 1.5 6 1 N asparagine 1.5 6 1 P proline 8.2 33 3 Q glutamine 4.7 19 1 R arginine 8.2 33 2 S serine 8.5 34 2 T threonine 3.7 15 2 V valine 4.5 18 2 W tryptophan 1.0 4 1 Y tyrosine 2.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 3 isoform b LHX3 0.931 LIM homeobox protein 3 isoform a LHX4 0.597 LIM homeobox protein 4 LHX5 0.273 LIM homeobox protein 5 LHX1 0.260 LIM homeobox protein 1 LMX1A 0.202 LIM homeobox transcription factor 1, alpha isoform a... LMX1B 0.188 LIM homeobox transcription factor 1, beta ISL2 0.172 ISL LIM homeobox 2 LHX6 0.171 LIM homeobox protein 6 isoform 2 LHX6 0.171 LIM homeobox protein 6 isoform 1 ISL1 0.170 islet-1 LHX8 0.164 LIM homeobox 8 LHX2 0.133 LIM homeobox protein 2 LHX9 0.130 LIM homeobox 9 isoform 1 LHX9 0.130 LIM homeobox 9 isoform 2 LMO3 0.116 LIM domain only 3 LMO3 0.116 LIM domain only 3 LMO1 0.115 LIM domain only 1 LMO4 0.110 LIM domain only 4 LMO2 0.089 LIM domain only 2 isoform 2 LMO2 0.089 LIM domain only 2 isoform 2 LMO2 0.089 LIM domain only 2 isoform 1 LIMK1 0.086 LIM domain kinase 1 ABLIM2 0.079 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.077 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.077 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.077 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.077 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.