LMX1B 28959

Name: LMX1B	Sequence: fasta or formatted (372aa)		NCBI GI: 4505007
Description: LIM homeobox transcription factor 1, beta		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 22 2 C cysteine 5.1 19 3 D aspartate 6.5 24 2 E glutamate 6.5 24 2 F phenylalanine 3.5 13 1 G glycine 6.7 25 1 H histidine 1.6 6 1 I isoleucine 2.2 8 1 K lysine 5.9 22 2 L leucine 8.3 31 2 M methionine 3.5 13 2 N asparagine 1.3 5 1 P proline 5.6 21 2 Q glutamine 8.9 33 4 R arginine 6.7 25 2 S serine 10.2 38 2 T threonine 3.5 13 2 V valine 5.1 19 2 W tryptophan 0.5 2 1 Y tyrosine 2.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox transcription factor 1, beta LMX1A 0.647 LIM homeobox transcription factor 1, alpha isoform a... LHX5 0.231 LIM homeobox protein 5 LHX1 0.228 LIM homeobox protein 1 LHX3 0.212 LIM homeobox protein 3 isoform a LHX4 0.212 LIM homeobox protein 4 LHX3 0.205 LIM homeobox protein 3 isoform b ISL2 0.205 ISL LIM homeobox 2 ISL1 0.191 islet-1 LHX8 0.189 LIM homeobox 8 LHX6 0.181 LIM homeobox protein 6 isoform 2 LHX6 0.177 LIM homeobox protein 6 isoform 1 LHX9 0.161 LIM homeobox 9 isoform 1 LHX9 0.161 LIM homeobox 9 isoform 2 LMX1A 0.158 LIM homeobox transcription factor 1, alpha isoform b... LHX2 0.142 LIM homeobox protein 2 LMX1A 0.128 LIM homeobox transcription factor 1, alpha isoform c... LMO3 0.114 LIM domain only 3 LMO3 0.114 LIM domain only 3 LMO1 0.111 LIM domain only 1 LMO4 0.108 LIM domain only 4 LMO2 0.086 LIM domain only 2 isoform 2 LMO2 0.086 LIM domain only 2 isoform 2 LMO2 0.086 LIM domain only 2 isoform 1 LIMK1 0.076 LIM domain kinase 1 PDLIM7 0.070 PDZ and LIM domain 7 isoform 2 PDLIM7 0.070 PDZ and LIM domain 7 isoform 1 LIMK2 0.066 LIM domain kinase 2 isoform 2a ABLIM1 0.065 actin-binding LIM protein 1 isoform b ABLIM1 0.065 actin-binding LIM protein 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.