LHX5 1812

Name: LHX5	Sequence: fasta or formatted (402aa)		NCBI GI: 11641283
Description: LIM homeobox protein 5		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 28 2 C cysteine 3.7 15 2 D aspartate 5.5 22 2 E glutamate 6.0 24 2 F phenylalanine 4.5 18 2 G glycine 7.5 30 2 H histidine 2.5 10 1 I isoleucine 2.0 8 1 K lysine 5.2 21 1 L leucine 8.2 33 2 M methionine 2.5 10 2 N asparagine 4.5 18 2 P proline 8.5 34 2 Q glutamine 3.7 15 1 R arginine 6.7 27 2 S serine 10.0 40 4 T threonine 5.5 22 2 V valine 3.2 13 1 W tryptophan 0.7 3 1 Y tyrosine 2.7 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 5 LHX1 0.733 LIM homeobox protein 1 LHX3 0.269 LIM homeobox protein 3 isoform a LHX3 0.269 LIM homeobox protein 3 isoform b LHX4 0.269 LIM homeobox protein 4 LMX1B 0.209 LIM homeobox transcription factor 1, beta LMX1A 0.203 LIM homeobox transcription factor 1, alpha isoform a... ISL1 0.169 islet-1 LHX2 0.169 LIM homeobox protein 2 LHX9 0.168 LIM homeobox 9 isoform 1 LHX9 0.168 LIM homeobox 9 isoform 2 ISL2 0.166 ISL LIM homeobox 2 LHX8 0.162 LIM homeobox 8 LHX6 0.162 LIM homeobox protein 6 isoform 2 LHX6 0.162 LIM homeobox protein 6 isoform 1 LMO4 0.104 LIM domain only 4 LMO1 0.097 LIM domain only 1 LMO3 0.093 LIM domain only 3 LMO3 0.093 LIM domain only 3 LIMK1 0.083 LIM domain kinase 1 LMO2 0.076 LIM domain only 2 isoform 2 LMO2 0.076 LIM domain only 2 isoform 2 LMO2 0.076 LIM domain only 2 isoform 1 ABLIM3 0.075 actin binding LIM protein family, member 3 ABLIM1 0.070 actin-binding LIM protein 1 isoform c ABLIM1 0.070 actin-binding LIM protein 1 isoform b ABLIM1 0.070 actin-binding LIM protein 1 isoform a PDLIM7 0.061 PDZ and LIM domain 7 isoform 2 PDLIM7 0.061 PDZ and LIM domain 7 isoform 1 ABLIM2 0.060 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.