Guide to the Human Genome
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Name: ABLIM2 Sequence: fasta or formatted (531aa) NCBI GI: 194272204
Description:

actin binding LIM protein family, member 2 isoform 5

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt prot [521aa] actin binding LIM protein family, member 2 isoform 6
alt prot [645aa] actin binding LIM protein family, member 2 isoform 1
alt prot [611aa] actin binding LIM protein family, member 2 isoform 2
alt prot [572aa] actin binding LIM protein family, member 2 isoform 3
alt prot [559aa] actin binding LIM protein family, member 2 isoform 4
alt prot [470aa] actin binding LIM protein family, member 2 isoform 7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         32           2
 C cysteine            5.5         29           1
 D aspartate           6.8         36           2
 E glutamate           5.5         29           2
 F phenylalanine       3.2         17           2
 G glycine             7.5         40           2
 H histidine           2.6         14           1
 I isoleucine          4.0         21           2
 K lysine              6.0         32           3
 L leucine             7.9         42           2
 M methionine          1.5          8           1
 N asparagine          1.9         10           1
 P proline             5.5         29           2
 Q glutamine           4.1         22           1
 R arginine            6.8         36           2
 S serine             11.3         60           2
 T threonine           4.5         24           1
 V valine              4.3         23           2
 W tryptophan          0.8          4           1
 Y tyrosine            4.3         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin binding LIM protein family, member 2 isoform ... 
ABLIM2                0.968   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.953   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.949   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.931   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.873   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.839   actin binding LIM protein family, member 2 isoform ...
ABLIM1                0.481   actin-binding LIM protein 1 isoform b 
ABLIM1                0.481   actin-binding LIM protein 1 isoform a 
ABLIM1                0.467   actin-binding LIM protein 1 isoform c 
ABLIM3                0.414   actin binding LIM protein family, member 3 
ABLIM1                0.128   actin-binding LIM protein 1 isoform s 
PXN                   0.105   paxillin isoform 3 
PXN                   0.105   paxillin isoform 2 
PXN                   0.105   paxillin isoform 1 
LPXN                  0.083   leupaxin isoform 1 
LPXN                  0.083   leupaxin isoform 2 
LIMS2                 0.079   LIM and senescent cell antigen-like domains 2 isofor...
LIMS2                 0.078   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.078   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.078   LIM and senescent cell antigen-like domains 2 isofo...
LIMS1                 0.078   LIM and senescent cell antigen-like domains 1 
TGFB1I1               0.077   transforming growth factor beta 1 induced transcrip...
TGFB1I1               0.077   transforming growth factor beta 1 induced transcript...
LIMK1                 0.068   LIM domain kinase 1 
FHL3                  0.066   four and a half LIM domains 3 
EPB49                 0.066   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.066   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.066   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.064   erythrocyte membrane protein band 4.9 isoform 3 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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