LMO1 28958

Name: LMO1	Sequence: fasta or formatted (156aa)		NCBI GI: 4505005
Description: LIM domain only 1		Referenced in: Homeobox and Related Proteins LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 9 2 C cysteine 9.6 15 2 D aspartate 7.1 11 1 E glutamate 4.5 7 2 F phenylalanine 4.5 7 2 G glycine 7.1 11 1 H histidine 1.3 2 1 I isoleucine 2.6 4 1 K lysine 8.3 13 1 L leucine 11.5 18 2 M methionine 4.5 7 2 N asparagine 5.1 8 2 P proline 1.9 3 1 Q glutamine 5.1 8 1 R arginine 5.8 9 2 S serine 2.6 4 1 T threonine 3.2 5 2 V valine 5.1 8 1 W tryptophan 0.6 1 1 Y tyrosine 3.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain only 1 LMO3 0.827 LIM domain only 3 LMO3 0.827 LIM domain only 3 LMO2 0.465 LIM domain only 2 isoform 2 LMO2 0.465 LIM domain only 2 isoform 2 LMO2 0.465 LIM domain only 2 isoform 1 LMO4 0.446 LIM domain only 4 LHX4 0.324 LIM homeobox protein 4 LHX9 0.317 LIM homeobox 9 isoform 1 LHX9 0.317 LIM homeobox 9 isoform 2 LHX2 0.308 LIM homeobox protein 2 LHX3 0.298 LIM homeobox protein 3 isoform a LHX3 0.298 LIM homeobox protein 3 isoform b LHX1 0.266 LIM homeobox protein 1 LMX1B 0.263 LIM homeobox transcription factor 1, beta LMX1A 0.263 LIM homeobox transcription factor 1, alpha isoform a... ISL2 0.256 ISL LIM homeobox 2 LHX5 0.253 LIM homeobox protein 5 LHX6 0.247 LIM homeobox protein 6 isoform 2 LHX6 0.247 LIM homeobox protein 6 isoform 1 ISL1 0.244 islet-1 LHX8 0.240 LIM homeobox 8 ABLIM1 0.176 actin-binding LIM protein 1 isoform c ABLIM1 0.176 actin-binding LIM protein 1 isoform b ABLIM1 0.176 actin-binding LIM protein 1 isoform a ABLIM2 0.154 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.154 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.154 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.154 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.154 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.