LMO4 33493

Name: LMO4	Sequence: fasta or formatted (165aa)		NCBI GI: 5803072
Description: LIM domain only 4		Referenced in: Homeobox and Related Proteins LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 10 1 C cysteine 9.1 15 2 D aspartate 4.2 7 1 E glutamate 1.2 2 1 F phenylalanine 3.0 5 1 G glycine 9.1 15 2 H histidine 3.0 5 1 I isoleucine 4.2 7 1 K lysine 3.6 6 1 L leucine 9.7 16 2 M methionine 2.4 4 1 N asparagine 5.5 9 1 P proline 5.5 9 3 Q glutamine 4.2 7 1 R arginine 6.1 10 1 S serine 10.9 18 3 T threonine 3.6 6 1 V valine 3.6 6 1 W tryptophan 1.2 2 1 Y tyrosine 3.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain only 4 LMO1 0.416 LIM domain only 1 LMO3 0.401 LIM domain only 3 LMO3 0.401 LIM domain only 3 LMO2 0.320 LIM domain only 2 isoform 2 LMO2 0.320 LIM domain only 2 isoform 2 LMO2 0.320 LIM domain only 2 isoform 1 LHX9 0.290 LIM homeobox 9 isoform 1 LHX9 0.290 LIM homeobox 9 isoform 2 LHX4 0.287 LIM homeobox protein 4 LHX2 0.284 LIM homeobox protein 2 LHX3 0.266 LIM homeobox protein 3 isoform a LHX3 0.266 LIM homeobox protein 3 isoform b ISL2 0.260 ISL LIM homeobox 2 LHX5 0.254 LIM homeobox protein 5 LHX8 0.254 LIM homeobox 8 LHX6 0.246 LIM homeobox protein 6 isoform 2 LHX6 0.246 LIM homeobox protein 6 isoform 1 LHX1 0.246 LIM homeobox protein 1 ISL1 0.243 islet-1 LMX1B 0.240 LIM homeobox transcription factor 1, beta LMX1A 0.237 LIM homeobox transcription factor 1, alpha isoform a... LIMK1 0.159 LIM domain kinase 1 ABLIM1 0.138 actin-binding LIM protein 1 isoform c ABLIM1 0.138 actin-binding LIM protein 1 isoform b ABLIM1 0.138 actin-binding LIM protein 1 isoform a ABLIM2 0.135 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.135 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.135 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.135 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.