LHX6 3359

Name: LHX6	Sequence: fasta or formatted (392aa)		NCBI GI: 134284359
Description: LIM homeobox protein 6 isoform 1		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [377aa] LIM homeobox protein 6 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 40 2 C cysteine 5.4 21 1 D aspartate 4.1 16 2 E glutamate 5.4 21 2 F phenylalanine 2.8 11 1 G glycine 6.1 24 2 H histidine 2.8 11 1 I isoleucine 3.1 12 1 K lysine 4.8 19 2 L leucine 7.7 30 2 M methionine 2.3 9 1 N asparagine 3.6 14 2 P proline 7.7 30 2 Q glutamine 6.1 24 2 R arginine 6.6 26 2 S serine 7.9 31 2 T threonine 4.8 19 2 V valine 4.8 19 1 W tryptophan 1.0 4 1 Y tyrosine 2.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 6 isoform 1 LHX6 0.893 LIM homeobox protein 6 isoform 2 LHX8 0.475 LIM homeobox 8 LHX9 0.191 LIM homeobox 9 isoform 1 LHX9 0.191 LIM homeobox 9 isoform 2 LHX2 0.189 LIM homeobox protein 2 LHX3 0.174 LIM homeobox protein 3 isoform a LHX3 0.174 LIM homeobox protein 3 isoform b LHX1 0.169 LIM homeobox protein 1 LMX1A 0.168 LIM homeobox transcription factor 1, alpha isoform a... ISL1 0.168 islet-1 ISL2 0.168 ISL LIM homeobox 2 LHX5 0.166 LIM homeobox protein 5 LMX1B 0.165 LIM homeobox transcription factor 1, beta LHX4 0.164 LIM homeobox protein 4 LMO4 0.103 LIM domain only 4 LMO1 0.097 LIM domain only 1 LMO3 0.092 LIM domain only 3 LMO3 0.092 LIM domain only 3 LMO2 0.081 LIM domain only 2 isoform 1 LIMK1 0.074 LIM domain kinase 1 LMO2 0.069 LIM domain only 2 isoform 2 LMO2 0.069 LIM domain only 2 isoform 2 ABLIM1 0.063 actin-binding LIM protein 1 isoform c ABLIM1 0.063 actin-binding LIM protein 1 isoform b ABLIM1 0.063 actin-binding LIM protein 1 isoform a PDLIM7 0.062 PDZ and LIM domain 7 isoform 2 PDLIM7 0.062 PDZ and LIM domain 7 isoform 1 ABLIM3 0.057 actin binding LIM protein family, member 3 PDLIM5 0.057 PDZ and LIM domain 5 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.