LHX1 25216

Name: LHX1	Sequence: fasta or formatted (406aa)		NCBI GI: 30410785
Description: LIM homeobox protein 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 27 2 C cysteine 3.9 16 2 D aspartate 5.2 21 2 E glutamate 5.9 24 2 F phenylalanine 4.9 20 2 G glycine 7.4 30 2 H histidine 3.2 13 2 I isoleucine 2.2 9 2 K lysine 5.2 21 1 L leucine 7.9 32 2 M methionine 2.0 8 2 N asparagine 4.7 19 1 P proline 9.1 37 2 Q glutamine 4.2 17 1 R arginine 6.4 26 2 S serine 10.3 42 2 T threonine 3.7 15 2 V valine 4.2 17 1 W tryptophan 0.7 3 1 Y tyrosine 2.2 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 1 LHX5 0.723 LIM homeobox protein 5 LHX4 0.265 LIM homeobox protein 4 LHX3 0.253 LIM homeobox protein 3 isoform a LHX3 0.253 LIM homeobox protein 3 isoform b LMX1B 0.204 LIM homeobox transcription factor 1, beta LMX1A 0.201 LIM homeobox transcription factor 1, alpha isoform a... ISL1 0.169 islet-1 LHX2 0.169 LIM homeobox protein 2 ISL2 0.168 ISL LIM homeobox 2 LHX9 0.164 LIM homeobox 9 isoform 1 LHX9 0.164 LIM homeobox 9 isoform 2 LHX6 0.162 LIM homeobox protein 6 isoform 2 LHX6 0.162 LIM homeobox protein 6 isoform 1 LHX8 0.150 LIM homeobox 8 LMO1 0.100 LIM domain only 1 LMO4 0.099 LIM domain only 4 LMO3 0.097 LIM domain only 3 LMO3 0.097 LIM domain only 3 LMO2 0.081 LIM domain only 2 isoform 2 LMO2 0.081 LIM domain only 2 isoform 2 LMO2 0.081 LIM domain only 2 isoform 1 LIMK1 0.077 LIM domain kinase 1 ABLIM3 0.077 actin binding LIM protein family, member 3 ABLIM1 0.074 actin-binding LIM protein 1 isoform c ABLIM1 0.071 actin-binding LIM protein 1 isoform b ABLIM1 0.071 actin-binding LIM protein 1 isoform a PDLIM7 0.059 PDZ and LIM domain 7 isoform 2 PDLIM7 0.059 PDZ and LIM domain 7 isoform 1 ABLIM2 0.057 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.