LHX3 25114

Name: LHX3	Sequence: fasta or formatted (397aa)		NCBI GI: 30023847
Description: LIM homeobox protein 3 isoform a		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [402aa] LIM homeobox protein 3 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 35 3 C cysteine 3.5 14 1 D aspartate 5.8 23 2 E glutamate 5.8 23 1 F phenylalanine 3.5 14 2 G glycine 9.3 37 2 H histidine 2.3 9 1 I isoleucine 1.3 5 1 K lysine 5.0 20 2 L leucine 9.3 37 2 M methionine 1.5 6 1 N asparagine 1.5 6 1 P proline 8.3 33 3 Q glutamine 4.8 19 1 R arginine 7.8 31 2 S serine 8.3 33 2 T threonine 4.5 18 2 V valine 4.8 19 2 W tryptophan 1.0 4 1 Y tyrosine 2.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 3 isoform a LHX3 0.939 LIM homeobox protein 3 isoform b LHX4 0.603 LIM homeobox protein 4 LHX5 0.275 LIM homeobox protein 5 LHX1 0.263 LIM homeobox protein 1 LMX1A 0.204 LIM homeobox transcription factor 1, alpha isoform a... LMX1B 0.196 LIM homeobox transcription factor 1, beta ISL2 0.174 ISL LIM homeobox 2 LHX6 0.172 LIM homeobox protein 6 isoform 2 LHX6 0.172 LIM homeobox protein 6 isoform 1 ISL1 0.170 islet-1 LHX8 0.165 LIM homeobox 8 LHX2 0.134 LIM homeobox protein 2 LHX9 0.131 LIM homeobox 9 isoform 1 LHX9 0.131 LIM homeobox 9 isoform 2 LMO3 0.117 LIM domain only 3 LMO3 0.117 LIM domain only 3 LMO1 0.116 LIM domain only 1 LMO4 0.111 LIM domain only 4 LMO2 0.090 LIM domain only 2 isoform 2 LMO2 0.090 LIM domain only 2 isoform 2 LMO2 0.090 LIM domain only 2 isoform 1 LIMK1 0.086 LIM domain kinase 1 ABLIM2 0.079 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.076 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.075 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.075 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.