LHX6 3360

Name: LHX6	Sequence: fasta or formatted (377aa)		NCBI GI: 134284361
Description: LIM homeobox protein 6 isoform 2		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [392aa] LIM homeobox protein 6 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 40 2 C cysteine 5.0 19 1 D aspartate 3.7 14 2 E glutamate 5.3 20 2 F phenylalanine 2.9 11 1 G glycine 5.8 22 2 H histidine 2.9 11 1 I isoleucine 2.9 11 1 K lysine 4.5 17 2 L leucine 8.5 32 2 M methionine 2.1 8 1 N asparagine 3.4 13 2 P proline 8.5 32 2 Q glutamine 5.6 21 2 R arginine 6.6 25 2 S serine 8.5 32 2 T threonine 5.0 19 2 V valine 4.5 17 1 W tryptophan 1.1 4 1 Y tyrosine 2.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox protein 6 isoform 2 LHX6 0.933 LIM homeobox protein 6 isoform 1 LHX8 0.512 LIM homeobox 8 LHX9 0.203 LIM homeobox 9 isoform 1 LHX9 0.203 LIM homeobox 9 isoform 2 LHX2 0.197 LIM homeobox protein 2 LHX3 0.182 LIM homeobox protein 3 isoform a LHX3 0.182 LIM homeobox protein 3 isoform b LMX1B 0.176 LIM homeobox transcription factor 1, beta LHX1 0.176 LIM homeobox protein 1 LMX1A 0.175 LIM homeobox transcription factor 1, alpha isoform a... ISL1 0.175 islet-1 ISL2 0.175 ISL LIM homeobox 2 LHX5 0.174 LIM homeobox protein 5 LHX4 0.171 LIM homeobox protein 4 LMO4 0.108 LIM domain only 4 LMO1 0.101 LIM domain only 1 LMO3 0.096 LIM domain only 3 LMO3 0.096 LIM domain only 3 LMO2 0.084 LIM domain only 2 isoform 1 LIMK1 0.078 LIM domain kinase 1 LMO2 0.072 LIM domain only 2 isoform 2 LMO2 0.072 LIM domain only 2 isoform 2 ABLIM1 0.066 actin-binding LIM protein 1 isoform c ABLIM1 0.066 actin-binding LIM protein 1 isoform b ABLIM1 0.066 actin-binding LIM protein 1 isoform a PDLIM7 0.064 PDZ and LIM domain 7 isoform 2 PDLIM7 0.064 PDZ and LIM domain 7 isoform 1 ABLIM3 0.059 actin binding LIM protein family, member 3 PDLIM5 0.059 PDZ and LIM domain 5 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.