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Search of human proteins with 7657023
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657023 dickkopf homolog 2 precursor [Homo sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] 559 e-160
gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 200 9e-52
gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] 154 6e-38
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 50 1e-06
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 50 1e-06
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 50 1e-06
gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens] 40 0.002
gi|14165282 prokineticin 1 [Homo sapiens] 40 0.002
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 40 0.002
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 40 0.002
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 39 0.003
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 36 0.038
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 36 0.038
gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens] 34 0.15
gi|108773804 Fraser syndrome 1 [Homo sapiens] 34 0.15
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 33 0.19
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 33 0.19
gi|122937283 6720455I24Rik homolog [Homo sapiens] 33 0.19
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 33 0.25
gi|7661666 testin isoform 1 [Homo sapiens] 33 0.32
gi|23238188 testin isoform 2 [Homo sapiens] 33 0.32
gi|208973262 low density lipoprotein-related protein 12 isoform ... 33 0.32
gi|7305525 low density lipoprotein-related protein 12 isoform a ... 33 0.32
gi|22748701 zinc finger protein 641 [Homo sapiens] 33 0.32
gi|9625002 integrin, beta 6 [Homo sapiens] 32 0.55
gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens] 32 0.55
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 32 0.72
gi|58218998 hypothetical protein LOC340204 [Homo sapiens] 31 1.2
gi|134031945 SCO-spondin [Homo sapiens] 30 1.6
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 30 1.6
>gi|7657023 dickkopf homolog 2 precursor [Homo sapiens]
Length = 259
Score = 559 bits (1441), Expect = e-160
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MAALMRSKDSSCCLLLLAAVLMVESSQIGSSRAKLNSIKSSLGGETPGQAANRSAGMYQG 60
MAALMRSKDSSCCLLLLAAVLMVESSQIGSSRAKLNSIKSSLGGETPGQAANRSAGMYQG
Sbjct: 1 MAALMRSKDSSCCLLLLAAVLMVESSQIGSSRAKLNSIKSSLGGETPGQAANRSAGMYQG 60
Query: 61 LAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST 120
LAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST
Sbjct: 61 LAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST 120
Query: 121 RCNNGICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEG 180
RCNNGICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEG
Sbjct: 121 RCNNGICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEG 180
Query: 181 DPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCK 240
DPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCK
Sbjct: 181 DPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCK 240
Query: 241 VWKDATYSSKARLHVCQKI 259
VWKDATYSSKARLHVCQKI
Sbjct: 241 VWKDATYSSKARLHVCQKI 259
>gi|7110719 dickkopf homolog 1 precursor [Homo sapiens]
Length = 266
Score = 200 bits (509), Expect = 9e-52
Identities = 109/244 (44%), Positives = 141/244 (57%), Gaps = 27/244 (11%)
Query: 33 AKLNSIKSS---------LGGET--PGQAANRSAGMYQGLAFGGSKKGKNLG--QAYPCS 79
A LNS+ +S LGG PG A + + G + + G K + + Q YPC+
Sbjct: 31 ATLNSVLNSNAIKNLPPPLGGAAGHPGSAVSAAPG----ILYPGGNKYQTIDNYQPYPCA 86
Query: 80 SDKECEVGRYCHSPHQGSSA----CMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTESIL 135
D+EC YC SP +G A C+ CR+++KRC R MCCP C NGIC+ ++
Sbjct: 87 EDEECGTDEYCASPTRGGDAGVQICLACRKRRKRCMRHAMCCPGNYCKNGICVSSDQNHF 146
Query: 136 TPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCLRSSDCIEGFCC 195
I + T + H S D G+ +KM H KG EG CLRSSDC G CC
Sbjct: 147 RGEI---EETITESFGNDH-STLD-GYSRRTTLSSKMYHTKGQEGSVCLRSSDCASGLCC 201
Query: 196 ARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCKVWKD-ATYSSKARLH 254
ARHFW+KICKPVL +G+VCTK R+KGSHGLEIFQRC C +GLSC++ KD S+ +RLH
Sbjct: 202 ARHFWSKICKPVLKEGQVCTKHRRKGSHGLEIFQRCYCGEGLSCRIQKDHHQASNSSRLH 261
Query: 255 VCQK 258
CQ+
Sbjct: 262 TCQR 265
>gi|7657025 dickkopf homolog 4 precursor [Homo sapiens]
Length = 224
Score = 154 bits (390), Expect = 6e-38
Identities = 84/199 (42%), Positives = 110/199 (55%), Gaps = 15/199 (7%)
Query: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124
G++KG C SD +C ++C P C CR ++RC RD MCCP T C N
Sbjct: 34 GARKGSQ------CLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVN 87
Query: 125 GICIPVTES--ILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSH-IKGHEGD 181
+C + ++ IL + DGT H + GH + Q +P K S KG EG+
Sbjct: 88 DVCTTMEDATPILERQLDEQDGT-HAEGTTGHPVQEN---QPKRKPSIKKSQGRKGQEGE 143
Query: 182 PCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQ-RKKGSHGLEIFQRCDCAKGLSCK 240
CLR+ DC G CCARHFWTKICKPVL +G+VC+++ K + EIFQRCDC GL C+
Sbjct: 144 SCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCR 203
Query: 241 VWKDATYSSKARLHVCQKI 259
+ + ARL VCQKI
Sbjct: 204 S-QLTSNRQHARLRVCQKI 221
>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 50.4 bits (119), Expect = 1e-06
Identities = 45/188 (23%), Positives = 64/188 (34%), Gaps = 62/188 (32%)
Query: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124
G ++G+ +++ C D++C YC C CR ++ C RD CC C
Sbjct: 137 GDEEGR---RSHECIIDEDCGPSMYCQFA-SFQYTCQPCRGQRMLCTRDSECCGDQLCVW 192
Query: 125 GICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCL 184
G C TKM+ +G G C
Sbjct: 193 GHC------------------------------------------TKMA-TRGSNGTICD 209
Query: 185 RSSDCIEGFCCA--RHFWTKICKPVLHQGEVCTKQRKKGSHGLEI----------FQRCD 232
DC G CCA R +C P+ +GE+C S L++ RC
Sbjct: 210 NQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC---HDPASRLLDLITWELEPDGALDRCP 266
Query: 233 CAKGLSCK 240
CA GL C+
Sbjct: 267 CASGLLCQ 274
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 17/87 (19%)
Query: 170 TKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCT-------------- 215
T + +G C+ DC C + C+P Q +CT
Sbjct: 134 TSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWG 193
Query: 216 ---KQRKKGSHGLEIFQRCDCAKGLSC 239
K +GS+G + DC GL C
Sbjct: 194 HCTKMATRGSNGTICDNQRDCQPGLCC 220
>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 50.4 bits (119), Expect = 1e-06
Identities = 45/188 (23%), Positives = 64/188 (34%), Gaps = 62/188 (32%)
Query: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124
G ++G+ +++ C D++C YC C CR ++ C RD CC C
Sbjct: 137 GDEEGR---RSHECIIDEDCGPSMYCQFA-SFQYTCQPCRGQRMLCTRDSECCGDQLCVW 192
Query: 125 GICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCL 184
G C TKM+ +G G C
Sbjct: 193 GHC------------------------------------------TKMA-TRGSNGTICD 209
Query: 185 RSSDCIEGFCCA--RHFWTKICKPVLHQGEVCTKQRKKGSHGLEI----------FQRCD 232
DC G CCA R +C P+ +GE+C S L++ RC
Sbjct: 210 NQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC---HDPASRLLDLITWELEPDGALDRCP 266
Query: 233 CAKGLSCK 240
CA GL C+
Sbjct: 267 CASGLLCQ 274
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 17/87 (19%)
Query: 170 TKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCT-------------- 215
T + +G C+ DC C + C+P Q +CT
Sbjct: 134 TSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWG 193
Query: 216 ---KQRKKGSHGLEIFQRCDCAKGLSC 239
K +GS+G + DC GL C
Sbjct: 194 HCTKMATRGSNGTICDNQRDCQPGLCC 220
>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 50.4 bits (119), Expect = 1e-06
Identities = 45/188 (23%), Positives = 64/188 (34%), Gaps = 62/188 (32%)
Query: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124
G ++G+ +++ C D++C YC C CR ++ C RD CC C
Sbjct: 137 GDEEGR---RSHECIIDEDCGPSMYCQFA-SFQYTCQPCRGQRMLCTRDSECCGDQLCVW 192
Query: 125 GICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCL 184
G C TKM+ +G G C
Sbjct: 193 GHC------------------------------------------TKMA-TRGSNGTICD 209
Query: 185 RSSDCIEGFCCA--RHFWTKICKPVLHQGEVCTKQRKKGSHGLEI----------FQRCD 232
DC G CCA R +C P+ +GE+C S L++ RC
Sbjct: 210 NQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC---HDPASRLLDLITWELEPDGALDRCP 266
Query: 233 CAKGLSCK 240
CA GL C+
Sbjct: 267 CASGLLCQ 274
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 17/87 (19%)
Query: 170 TKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCT-------------- 215
T + +G C+ DC C + C+P Q +CT
Sbjct: 134 TSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWG 193
Query: 216 ---KQRKKGSHGLEIFQRCDCAKGLSC 239
K +GS+G + DC GL C
Sbjct: 194 HCTKMATRGSNGTICDNQRDCQPGLCC 220
>gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens]
Length = 108
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 183 CLRSSDCIEGFCCARHFWTK---ICKPVLHQGEVC-TKQRKKGSHGLEIFQRCDCAKGLS 238
C + S C G CCA W K IC P+ G+ C RK G + C C GL+
Sbjct: 34 CDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKVPFFGRRMHHTCPCLPGLA 93
Query: 239 C 239
C
Sbjct: 94 C 94
>gi|14165282 prokineticin 1 [Homo sapiens]
Length = 105
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 183 CLRSSDCIEGFCCARHFW---TKICKPVLHQGEVCTKQRKKGSHGLEIFQR-----CDCA 234
C R C G CCA W ++C P+ +GE C GSH + F++ C C
Sbjct: 26 CERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC----HPGSHKVPFFRKRKHHTCPCL 81
Query: 235 KGLSCKVWKDATY 247
L C + D Y
Sbjct: 82 PNLLCSRFPDGRY 94
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 40.0 bits (92), Expect = 0.002
Identities = 49/180 (27%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 73 GQAYPCSSDKECEVG---RYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST-RCNNGICI 128
G+ +P CE G +YC P + CRR+ +C C + RC C
Sbjct: 249 GRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLT--CE 306
Query: 129 PVTESILTPHIPAL----DGTRHR--DRNHGHYSNH--------DLGWQNLGRPHTKMSH 174
P A +G HR GH NH + GW R TK S+
Sbjct: 307 PGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIG-DRCETKCSN 365
Query: 175 IKGHEGDPC-LRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDC 233
G G+ C +DC G C + +C P +H G C G HG + Q C C
Sbjct: 366 --GTYGEDCAFVCADCGSGHCDFQS-GRCLCSPGVH-GPHCNVTCPPGLHGADCAQACSC 421
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 40.0 bits (92), Expect = 0.002
Identities = 49/180 (27%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 73 GQAYPCSSDKECEVG---RYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST-RCNNGICI 128
G+ +P CE G +YC P + CRR+ +C C + RC C
Sbjct: 249 GRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLT--CE 306
Query: 129 PVTESILTPHIPAL----DGTRHR--DRNHGHYSNH--------DLGWQNLGRPHTKMSH 174
P A +G HR GH NH + GW R TK S+
Sbjct: 307 PGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIG-DRCETKCSN 365
Query: 175 IKGHEGDPC-LRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDC 233
G G+ C +DC G C + +C P +H G C G HG + Q C C
Sbjct: 366 --GTYGEDCAFVCADCGSGHCDFQS-GRCLCSPGVH-GPHCNVTCPPGLHGADCAQACSC 421
>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
Length = 1044
Score = 39.3 bits (90), Expect = 0.003
Identities = 49/196 (25%), Positives = 66/196 (33%), Gaps = 30/196 (15%)
Query: 69 GKNLGQAYPCSSDKECE--VGR-YCHSPHQGSSACMVCR--------RKKKRCHRDGMCC 117
G+N Q PC +C+ G+ +C + + G C + CH G C
Sbjct: 268 GQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCS 327
Query: 118 PST---RCNNGICIPVTESILTP---HIPALDGTRHRDRNHGHYSNHDL--------GWQ 163
P+T C G P + L P H P D ++ S H + GW
Sbjct: 328 PTTGACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDADN-TISCHPVTGACTCQPGWS 386
Query: 164 NLGRPHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSH 223
H S G+ GD C C G C C P GEVC G++
Sbjct: 387 G---HHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGF-MGEVCAVSCAAGTY 442
Query: 224 GLEIFQRCDCAKGLSC 239
G C C G +C
Sbjct: 443 GPNCSSICSCNNGGTC 458
Score = 33.5 bits (75), Expect = 0.19
Identities = 42/173 (24%), Positives = 52/173 (30%), Gaps = 36/173 (20%)
Query: 73 GQAYPCSSDKECEVGRYCHSPHQGSSACM-----VCRRKKKRCHRDGMCCPSTRCNNG-I 126
G PC+ C+ G CHS G + VC C CNNG
Sbjct: 402 GCQLPCT----CQNGADCHSITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGT 457
Query: 127 CIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCLRS 186
C PV S GWQ L + G G C S
Sbjct: 458 CSPVDGSCTCKE----------------------GWQGLD---CTLPCPSGTWGLNCNES 492
Query: 187 SDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSC 239
C G C+ + C P G+ C G+ GL + CDC+ C
Sbjct: 493 CTCANGAACSPIDGSCSCTPGW-LGDTCELPCPDGTFGLNCSEHCDCSHADGC 544
Score = 33.1 bits (74), Expect = 0.25
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 177 GHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKG 236
G G C C G C +C P + G C + GSHG RC C G
Sbjct: 179 GTHGKGCQLPCQCRHGASCDPRAGECLCAPG-YTGVYCEELCPPGSHGAHCELRCPCQNG 237
Query: 237 LSC 239
+C
Sbjct: 238 GTC 240
Score = 32.3 bits (72), Expect = 0.42
Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 112 RDGMCCPSTRCNNGICIPV-TESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHT 170
R CCP + CIP+ TE + + D T H + GW G P
Sbjct: 84 RRSQCCPGYYESGDFCIPLCTEECVHGRCVSPD-TCHCEP----------GW---GGPDC 129
Query: 171 KMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQR 230
H G C C G C +C +G C + G+HG
Sbjct: 130 SSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAAGF-RGWRCEELCAPGTHGKGCQLP 188
Query: 231 CDCAKGLSC 239
C C G SC
Sbjct: 189 CQCRHGASC 197
Score = 31.6 bits (70), Expect = 0.72
Identities = 47/196 (23%), Positives = 65/196 (33%), Gaps = 45/196 (22%)
Query: 78 CSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST---------RCNNGI-C 127
CS+ +C+ G C+ P G+ C R RC +C P T +C +G C
Sbjct: 142 CSNRCQCQNGALCN-PITGACVCAAGFRGW-RCEE--LCAPGTHGKGCQLPCQCRHGASC 197
Query: 128 IPVTESILTPHIPALDGTRHRDR----NHGHYSNHDLGWQNLGRPHTKMSHIKGH----- 178
P L P G + +HG + QN G H HI G
Sbjct: 198 DPRAGECLCA--PGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCH----HITGECACPP 251
Query: 179 ---------------EGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSH 223
G C + C G C H + + G+ C ++ GS
Sbjct: 252 GWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCD-HVTGQCHCTAGYMGDRCQEECPFGSF 310
Query: 224 GLEIFQRCDCAKGLSC 239
G + Q CDC G C
Sbjct: 311 GFQCSQHCDCHNGGQC 326
Score = 29.3 bits (64), Expect = 3.6
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 177 GHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKG 236
G G C + C G C+ C P G CT++ G + + C C G
Sbjct: 700 GFWGPACFHACSCHNGASCSAEDGACHCTPGW-TGLFCTQRCPAAFFGKDCGRVCQCQNG 758
Query: 237 LSC 239
SC
Sbjct: 759 ASC 761
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 35.8 bits (81), Expect = 0.038
Identities = 37/168 (22%), Positives = 51/168 (30%), Gaps = 33/168 (19%)
Query: 78 CSSDKECEVGRYCHSPHQGSSACMV------CRRKKKRCHRDGMCCPSTRCNNGICIPVT 131
CS+ C+ G C P G+ C C+R + C P N+ C P
Sbjct: 576 CSNTCTCKNGGTC-LPENGNCVCAPGFRGPSCQRSCQPGRYGKRCVPCKCANHSFCHPSN 634
Query: 132 ESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCLRSSDCIE 191
+ GW P GH G+ C ++ C
Sbjct: 635 GTCYCL----------------------AGWTG---PDCSQPCPPGHWGENCAQTCQCHH 669
Query: 192 GFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSC 239
G C + IC P+ G C + G+ G Q C C G C
Sbjct: 670 GGTCHPQDGSCIC-PLGWTGHHCLEGCPLGTFGANCSQPCQCGPGEKC 716
Score = 33.1 bits (74), Expect = 0.25
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 176 KGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAK 235
+G G C + C G C R C P + G+ C ++ G G + + CDCA
Sbjct: 265 EGFHGPNCSQECRCHNGGLCDRFTGQCRCAPG-YTGDRCREECPVGRFGQDCAETCDCAP 323
Query: 236 GLSC 239
C
Sbjct: 324 DARC 327
Score = 30.0 bits (66), Expect = 2.1
Identities = 41/177 (23%), Positives = 56/177 (31%), Gaps = 40/177 (22%)
Query: 82 KECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST------------RCNNGICIP 129
+EC VGR+ G C C D C P+ RC + +C P
Sbjct: 304 EECPVGRF------GQDCAETCD-----CAPDARCFPANGACLCEHGFTGDRCTDRLC-P 351
Query: 130 VTESILTPHIPALDGTRHRDRNHG---HYSNHDL----GWQNLGRPHTKMSHIKGHEGDP 182
L+ P DR H H N + GW L H S + G
Sbjct: 352 DGFYGLSCQAPCTC-----DREHSLSCHPMNGECSCLPGWAGL---HCNESCPQDTHGPG 403
Query: 183 CLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSC 239
C C+ G C C P + G C ++G+ RC C ++C
Sbjct: 404 CQEHCLCLHGGVCQATSGLCQCAPG-YTGPHCASLCPPDTYGVNCSARCSCENAIAC 459
Score = 30.0 bits (66), Expect = 2.1
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 161 GWQNLGRPHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKK 220
GWQ R + + G G C S C C+ C P H G C K
Sbjct: 471 GWQ---RGNCSVPCPPGTWGFSCNASCQCAHEAVCSPQTGACTCTPGWH-GAHCQLPCPK 526
Query: 221 GSHGLEIFQRCDCAKGLSC 239
G G RCDC C
Sbjct: 527 GQFGEGCASRCDCDHSDGC 545
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 35.8 bits (81), Expect = 0.038
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 177 GHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKG 236
G G C + C+ G C T C P +GE C + G++GL +RCDC+
Sbjct: 489 GTWGFGCNLTCQCLNGGACNTLDGTCTCAPGW-RGEKCELPCQDGTYGLNCAERCDCSHA 547
Query: 237 LSC 239
C
Sbjct: 548 DGC 550
Score = 33.5 bits (75), Expect = 0.19
Identities = 45/189 (23%), Positives = 61/189 (32%), Gaps = 31/189 (16%)
Query: 78 CSSDKECEVGRYCHSPHQGSSACMVCRRK---KKRCHRDGM---CCPSTRCNNGI-CIPV 130
C+S +C+ G C+ P G+ C R + RC + C +C NG C V
Sbjct: 148 CTSRCQCKNGALCN-PITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHV 206
Query: 131 TESILTPHIPALDGTRHRDR----NHGHYSNHDLGWQNLGRPHTKMSHI----------- 175
T P P G D HG QN G H
Sbjct: 207 TGECRCP--PGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVC 264
Query: 176 -----KGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQR 230
+G G C + C G C C P + GE C + G++G+ +
Sbjct: 265 GQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPG-YTGERCQDECPVGTYGVLCAET 323
Query: 231 CDCAKGLSC 239
C C G C
Sbjct: 324 CQCVNGGKC 332
Score = 33.5 bits (75), Expect = 0.19
Identities = 43/182 (23%), Positives = 59/182 (32%), Gaps = 55/182 (30%)
Query: 84 CEVGRYCHSPHQGSSACMVCRRKKKRCHR-DGMC--------------CPSTR------- 121
C G Y H+ S C C CH G+C CPS R
Sbjct: 615 CSPGFY---GHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNEVCPSGRFGKNCAG 671
Query: 122 ----CNNGICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKG 177
NNG C P+ DR+ Y GW +G ++
Sbjct: 672 ICTCTNNGTCNPI------------------DRSCQCYP----GW--IGSDCSQPCP-PA 706
Query: 178 HEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGL 237
H G C+ + +C G C+ + C P G CT++ G +G + C C G
Sbjct: 707 HWGPNCIHTCNCHNGAFCSAYDGECKCTPGW-TGLYCTQRCPLGFYGKDCALICQCQNGA 765
Query: 238 SC 239
C
Sbjct: 766 DC 767
>gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens]
Length = 129
Score = 33.9 bits (76), Expect = 0.15
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 25/82 (30%)
Query: 183 CLRSSDCIEGFCCARHFWTK---ICKPVLHQGEVC---------------TKQRKKGSH- 223
C + S C G CCA W K IC P+ G+ C ++RK+
Sbjct: 34 CDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKNNFGNGRQERRKRKRSKRK 93
Query: 224 ------GLEIFQRCDCAKGLSC 239
G + C C GL+C
Sbjct: 94 KEVPFFGRRMHHTCPCLPGLAC 115
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 33.9 bits (76), Expect = 0.15
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 96 GSSACMVCRRKKKRCHRDGMCCPSTRCNNGICI 128
G A + C R ++ H DG CCP NG C+
Sbjct: 318 GECAKVECARDEELIHLDGKCCPECISRNGYCV 350
>gi|33598931 scavenger receptor class F, member 1 isoform 3
precursor [Homo sapiens]
Length = 569
Score = 33.5 bits (75), Expect = 0.19
Identities = 44/176 (25%), Positives = 57/176 (32%), Gaps = 41/176 (23%)
Query: 87 GRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST-RCNNGICIPVTESILTPHIPALDGT 145
G C P S + C RC + C P T C + C P P L GT
Sbjct: 245 GARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCES--CEPGWNGTQCQQ-PCLPGT 301
Query: 146 ------------RHRDR---NHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPC-LRSSDC 189
RH + + GH D GW LG P + G G+ C C
Sbjct: 302 FGESCEQQCPHCRHGEACEPDTGHCQRCDPGW--LG-PRCEDPCPTGTFGEDCGSTCPTC 358
Query: 190 IEGFC--------CARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGL 237
++G C C+ +W G C G HG C+C +GL
Sbjct: 359 VQGSCDTVTGDCVCSAGYW----------GPSCNASCPAGFHGNNCSVPCECPEGL 404
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 33.5 bits (75), Expect = 0.19
Identities = 44/176 (25%), Positives = 57/176 (32%), Gaps = 41/176 (23%)
Query: 87 GRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST-RCNNGICIPVTESILTPHIPALDGT 145
G C P S + C RC + C P T C + C P P L GT
Sbjct: 245 GARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCES--CEPGWNGTQCQQ-PCLPGT 301
Query: 146 ------------RHRDR---NHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPC-LRSSDC 189
RH + + GH D GW LG P + G G+ C C
Sbjct: 302 FGESCEQQCPHCRHGEACEPDTGHCQRCDPGW--LG-PRCEDPCPTGTFGEDCGSTCPTC 358
Query: 190 IEGFC--------CARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGL 237
++G C C+ +W G C G HG C+C +GL
Sbjct: 359 VQGSCDTVTGDCVCSAGYW----------GPSCNASCPAGFHGNNCSVPCECPEGL 404
>gi|122937283 6720455I24Rik homolog [Homo sapiens]
Length = 1413
Score = 33.5 bits (75), Expect = 0.19
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 75 AYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTESI 134
A PC+ + +C G YC H GS C VC H C S C NG +
Sbjct: 505 AMPCNMNTQCPDGGYC-MEHGGSYLC-VCHTDHNASHSLPSPCDSDPCFNGGSCDAHDDS 562
Query: 135 LTPHIPALDGTRHRDRNHGH 154
T P +H ++ H
Sbjct: 563 YTCECPRGFHGKHCEKARPH 582
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 33.1 bits (74), Expect = 0.25
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 168 PHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEI 227
P + +GH G C + C G C C P +G C G GL+
Sbjct: 898 PRCEQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTC-PAGWRGTFCEHACPAGFFGLDC 956
Query: 228 FQRCDCAKGLSC 239
C+C G +C
Sbjct: 957 RSACNCTAGAAC 968
Score = 32.0 bits (71), Expect = 0.55
Identities = 41/159 (25%), Positives = 51/159 (32%), Gaps = 50/159 (31%)
Query: 87 GRYCH---SPHQGSSACMVCRRKKKRCHRDGMCCPST---RCNNGICIPVTESILTPHIP 140
GR+C P + +AC + + CH + C P+T RC G E P
Sbjct: 1328 GRHCELACPPGRYGAACHL----ECSCHNNSTCEPATGTCRCGPGFYGQACEHPCPPGF- 1382
Query: 141 ALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFW 200
H G Q L G PC D I G C
Sbjct: 1383 -----------------HGAGCQGL---------CWCQHGAPC----DPISGRC------ 1406
Query: 201 TKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSC 239
+C H G C + + GS G QRCDC G C
Sbjct: 1407 --LCPAGFH-GHFCERGCEPGSFGEGCHQRCDCDGGAPC 1442
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/147 (25%), Positives = 52/147 (35%), Gaps = 26/147 (17%)
Query: 116 CCPSTRCNNG-ICIPVTESILTPHIPALDGTRHRDR-NHGHYSNH---DLGWQNLGRPHT 170
C S C NG C VT + P P + GT D G+Y H N GR H
Sbjct: 564 CSFSCSCQNGGTCDSVTGACRCP--PGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHR 621
Query: 171 -------------KMSHIKGHE---GDPCLRSSDCIEGFC--CARHFWTKICKPVLHQGE 212
+ H+ G C C++ C + + CK +GE
Sbjct: 622 LYGACLCDPGLYGRFCHLTCPPWAFGPGCSEECQCVQPHTQSCDKRDGSCSCKAGF-RGE 680
Query: 213 VCTKQRKKGSHGLEIFQRCDCAKGLSC 239
C + + G G +Q C C G++C
Sbjct: 681 RCQAECELGYFGPGCWQACTCPVGVAC 707
Score = 30.8 bits (68), Expect = 1.2
Identities = 55/205 (26%), Positives = 65/205 (31%), Gaps = 50/205 (24%)
Query: 79 SSDKECEVGRY-------CHSPHQGS--SACMVCRRKKKRCHRD-GMCCPSTR------- 121
S + C GRY C + GS +A CR D + CP R
Sbjct: 1201 SCQQRCPPGRYGPGCEQLCGCLNGGSCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTH 1260
Query: 122 ---CNNGI-CIPVTESILTPHIPALDGTRHRD-----------------RNHG--HYSNH 158
C G C PVT + L P P G R RN G H SN
Sbjct: 1261 VCGCGQGAACDPVTGTCLCP--PGRAGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNG 1318
Query: 159 D----LGWQNLGRPHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVC 214
LGW GR H +++ G G C C C T C P + G+ C
Sbjct: 1319 SCSCGLGWT--GR-HCELACPPGRYGAACHLECSCHNNSTCEPATGTCRCGPGFY-GQAC 1374
Query: 215 TKQRKKGSHGLEIFQRCDCAKGLSC 239
G HG C C G C
Sbjct: 1375 EHPCPPGFHGAGCQGLCWCQHGAPC 1399
Score = 29.3 bits (64), Expect = 3.6
Identities = 43/187 (22%), Positives = 59/187 (31%), Gaps = 27/187 (14%)
Query: 71 NLGQAYPCSSDKECEVG-------RYCHSPHQGSSACMVCRRKKKRCHRD---GMCCPST 120
N G +P + C G R C + H G C D G+C
Sbjct: 834 NDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCL--- 890
Query: 121 RCNNGICIPVTESILTPHIPALDGTRHRDR-NHGHYSNH-------DLGWQNLGRPHTKM 172
C G P E P G R + HG +H GW+ H
Sbjct: 891 -CEAGYVGPRCEQ-QCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACP 948
Query: 173 SHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCD 232
+ G G C + +C G C + +C P +G C + ++G Q C
Sbjct: 949 A---GFFGLDCRSACNCTAGAACDAVNGSCLC-PAGRRGPRCAETCPAHTYGHNCSQACA 1004
Query: 233 CAKGLSC 239
C G SC
Sbjct: 1005 CFNGASC 1011
>gi|7661666 testin isoform 1 [Homo sapiens]
Length = 421
Score = 32.7 bits (73), Expect = 0.32
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 177 GHE---GDPCLRSSDCIEGFCCARHFWTKICK 205
GHE G PCL+ + EGF HFW KIC+
Sbjct: 13 GHEQGFGAPCLKCKEKCEGF--ELHFWRKICR 42
>gi|23238188 testin isoform 2 [Homo sapiens]
Length = 412
Score = 32.7 bits (73), Expect = 0.32
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 177 GHE---GDPCLRSSDCIEGFCCARHFWTKICK 205
GHE G PCL+ + EGF HFW KIC+
Sbjct: 4 GHEQGFGAPCLKCKEKCEGF--ELHFWRKICR 33
>gi|208973262 low density lipoprotein-related protein 12 isoform b
precursor [Homo sapiens]
Length = 840
Score = 32.7 bits (73), Expect = 0.32
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 77 PCSSDKECEVGR-----YCHSPH-QGSSACMVCRRKKKRCHRDGMCCP-STRCN 123
PC + C + Y H P+ + + C +C++++ C R+G+C P S RCN
Sbjct: 362 PCGGNWGCYTEQQRCDGYWHCPNGRDETNCTMCQKEEFPCSRNGVCYPRSDRCN 415
>gi|7305525 low density lipoprotein-related protein 12 isoform a
precursor [Homo sapiens]
Length = 859
Score = 32.7 bits (73), Expect = 0.32
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 77 PCSSDKECEVGR-----YCHSPH-QGSSACMVCRRKKKRCHRDGMCCP-STRCN 123
PC + C + Y H P+ + + C +C++++ C R+G+C P S RCN
Sbjct: 381 PCGGNWGCYTEQQRCDGYWHCPNGRDETNCTMCQKEEFPCSRNGVCYPRSDRCN 434
>gi|22748701 zinc finger protein 641 [Homo sapiens]
Length = 438
Score = 32.7 bits (73), Expect = 0.32
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 123 NNGICIPVTESILTPHIPALDG---------TRHRDRNHGHYSNHDLGWQN-LGRPHTKM 172
+N +C +S+L PH G RH+ + G L + GR H +
Sbjct: 249 SNLLCSTEMDSLLRPHTCPQCGKQFVWGSHLARHQQTHTGERPYSCLKCEKTFGRRHHLI 308
Query: 173 SHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQR 230
H K H D R S+C + F C H + + V +G+ C Q S G QR
Sbjct: 309 RHQKTHLHDKTSRCSECGKNFRCNSHLASH--QRVHAEGKSCKGQEVGESPGTRKRQR 364
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 32.0 bits (71), Expect = 0.55
Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 78 CSSDKECEVGRY-CHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTESIL- 135
C KE EV CH + GS C VC CH M RC G + T+S
Sbjct: 454 CDCQKEVEVNSSKCHHGN-GSFQCGVCA-----CHPGHM---GPRCECGEDMLSTDSCKE 504
Query: 136 TPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIK--GHEGDPCLRSSDCIEGF 193
P P+ G D G H + N+ P+ + + H+G C + DC G
Sbjct: 505 APDHPSCSG--RGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGE 562
Query: 194 CCARHFWT 201
C R WT
Sbjct: 563 CVCRSGWT 570
>gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]
Length = 349
Score = 32.0 bits (71), Expect = 0.55
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 179 EGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLS 238
EG+PC DC+ G CC + +CT + ++ + F C C +GL
Sbjct: 270 EGEPCDHHQDCLPGTCCDL------------REHLCTPHNRGLNN--KCFDDCMCVEGLR 315
Query: 239 C 239
C
Sbjct: 316 C 316
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 31.6 bits (70), Expect = 0.72
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 64 GGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCN 123
GGSK G CS K C C S SS C C + C CC S+ C
Sbjct: 81 GGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCCQSSCCK---PCCCSSGCG 137
Query: 124 NGIC 127
+ C
Sbjct: 138 SSCC 141
>gi|58218998 hypothetical protein LOC340204 [Homo sapiens]
Length = 121
Score = 30.8 bits (68), Expect = 1.2
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query: 181 DPCLRSSDCIEGFC------CARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCA 234
+ C+R+ DC G C C H C +G +C Q G ++ C C
Sbjct: 37 ESCIRNQDCETGCCQRAPDNCESH-----CAEKGSEGSLCQTQVFFGQ-----YRACPCL 86
Query: 235 KGLSCKVWKDATYSSKARLHVCQKI 259
+ L+C K+ + S A CQKI
Sbjct: 87 RNLTCIYSKNEKWLSIA-YGRCQKI 110
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 88 RYCHSPHQGSSAC------MVCRRKKKRCHRDGMCCPSTRCN 123
R CHSP G C + R+ K C +DG CP+ C+
Sbjct: 1774 RQCHSPQNGGRTCAALPGGLHSTRQTKPCPQDG--CPNATCS 1813
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 30.4 bits (67), Expect = 1.6
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 64 GGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHR---DGMCCPST 120
GGSK G C+ K C C S Q SS C C + C CC
Sbjct: 128 GGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQ-SSCCNPCCCQSSCCVPVCCQSSCCKPC 186
Query: 121 RCNNGICIPV 130
C + C+PV
Sbjct: 187 CCQSSCCVPV 196
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,247,163
Number of Sequences: 37866
Number of extensions: 572632
Number of successful extensions: 1897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1794
Number of HSP's gapped (non-prelim): 123
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.