ITGB6 37671

Name: ITGB6	Sequence: fasta or formatted (788aa)		NCBI GI: 9625002
Description: integrin, beta 6		Referenced in: Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 36 2 C cysteine 7.5 59 1 D aspartate 5.6 44 3 E glutamate 6.7 53 3 F phenylalanine 3.4 27 2 G glycine 8.5 67 2 H histidine 2.9 23 2 I isoleucine 5.6 44 3 K lysine 5.7 45 2 L leucine 9.5 75 2 M methionine 1.5 12 1 N asparagine 5.1 40 2 P proline 4.7 37 2 Q glutamine 3.7 29 1 R arginine 3.2 25 2 S serine 8.0 63 2 T threonine 5.1 40 2 V valine 6.1 48 2 W tryptophan 0.6 5 1 Y tyrosine 2.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 integrin, beta 6 ITGB3 0.496 integrin beta chain, beta 3 precursor ITGB5 0.464 integrin, beta 5 ITGB1 0.394 integrin beta 1 isoform 1A precursor ITGB1 0.394 integrin beta 1 isoform 1A precursor ITGB1 0.393 integrin beta 1 isoform 1D precursor ITGB1 0.383 integrin beta 1 isoform 1C-1 precursor ITGB1 0.383 integrin beta 1 isoform 1B precursor ITGB1 0.383 integrin beta 1 isoform 1C-2 precursor ITGB7 0.332 integrin, beta 7 ITGB2 0.325 integrin, beta 2 precursor ITGB2 0.325 integrin, beta 2 precursor ITGB8 0.315 integrin, beta 8 precursor ITGB4 0.250 integrin beta 4 isoform 2 precursor ITGB4 0.250 integrin beta 4 isoform 1 precursor ITGB4 0.250 integrin beta 4 isoform 3 precursor ITGBL1 0.070 integrin, beta-like 1 (with EGF-like repeat domains) ... ODZ4 0.043 odz, odd Oz/ten-m homolog 4 ODZ1 0.039 odz, odd Oz/ten-m homolog 1 isoform 3 ODZ1 0.039 odz, odd Oz/ten-m homolog 1 isoform 2 ODZ1 0.039 odz, odd Oz/ten-m homolog 1 isoform 1 ODZ3 0.038 odz, odd Oz/ten-m homolog 3 ODZ2 0.037 odz, odd Oz/ten-m homolog 2 TNXB 0.037 tenascin XB isoform 1 precursor TNC 0.035 tenascin C precursor PEAR1 0.034 platelet endothelial aggregation receptor 1 TNR 0.034 tenascin R SCARF2 0.031 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.031 scavenger receptor class F, member 2 isoform 2 [Homo... MEGF10 0.029 multiple EGF-like-domains 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.